Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_C17
(901 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 42 5e-04
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 42 5e-04
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 42 5e-04
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 41 0.001
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 37 0.023
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.039
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 36 0.052
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.052
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.052
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 35 0.091
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 33 0.21
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 33 0.21
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 33 0.21
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 33 0.21
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 33 0.21
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 33 0.28
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 33 0.28
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.28
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.37
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.64
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 32 0.64
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.64
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 31 1.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.1
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 2.0
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 2.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.0
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 2.0
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 30 2.6
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 30 2.6
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 30 2.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.4
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 29 3.4
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 29 4.5
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 4.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.5
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 4.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 4.5
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 6.0
AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf (tbp-asso... 29 6.0
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 6.0
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 28 7.9
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 28 7.9
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 7.9
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 7.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.9
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 28 7.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 7.9
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 28 7.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 42.3 bits (95), Expect = 5e-04
Identities = 34/109 (31%), Positives = 36/109 (33%)
Frame = -1
Query: 751 PXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQX 572
P G P P G PP P P PP PP G + +
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG-----PPPPPPPGGLPPISGGPPPP 761
Query: 571 XKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXP 425
P PGG PPPPPP K PPP P F P AP P
Sbjct: 762 PPP--PGG-----CPPPPPPPPPGGFKGGPPPPPPPGMFAPM--APVIP 801
Score = 31.9 bits (69), Expect = 0.64
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -1
Query: 880 GGXAPPXXXKXXEGGAXPPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFF 701
GG PP GG PPP G P P P G P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPP--- 765
Query: 700 XGAPPRPGXXKXXPXXXXXNPLXPPXP 620
G PP P P P PP P
Sbjct: 766 GGCPPPP--PPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.5
Identities = 31/129 (24%), Positives = 37/129 (28%)
Frame = -2
Query: 768 KXPRXPPXEXXXPXXXPXSXXFSXVPPPGLGKXKXXPXXXXKTXXXPHXPXGLGLFXXET 589
K P PP + + S +PP G P T P P GL T
Sbjct: 682 KIPLPPPTKMNLSAPSTSAGGSSALPPI-TGGPPPPPGLPPITGGPPPPPPPGGL-PPIT 739
Query: 588 AXXPKXXNPFXPGVGXVXXXKXXPPPPPPXX*KKKNPPXXFPXXXXPKXXPPKXQGXPFX 409
P P G+ + PPPPP PP P PP P
Sbjct: 740 GGPPPPPPP--GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMA 797
Query: 408 PKXXLFFXP 382
P + P
Sbjct: 798 PVIPDYLPP 806
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 776 GPPPPXXRFXXXVLFXGRXRPPLXXFXXPXGGXPPXKTPP 895
GPPPP + G PP P G PP PP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 42.3 bits (95), Expect = 5e-04
Identities = 34/109 (31%), Positives = 36/109 (33%)
Frame = -1
Query: 751 PXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQX 572
P G P P G PP P P PP PP G + +
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG-----PPPPPPPGGLPPISGGPPPP 761
Query: 571 XKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXP 425
P PGG PPPPPP K PPP P F P AP P
Sbjct: 762 PPP--PGG-----CPPPPPPPPPGGFKGGPPPPPPPGMFAPM--APVIP 801
Score = 31.9 bits (69), Expect = 0.64
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -1
Query: 880 GGXAPPXXXKXXEGGAXPPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFF 701
GG PP GG PPP G P P P G P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPP--- 765
Query: 700 XGAPPRPGXXKXXPXXXXXNPLXPPXP 620
G PP P P P PP P
Sbjct: 766 GGCPPPP--PPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.5
Identities = 31/129 (24%), Positives = 37/129 (28%)
Frame = -2
Query: 768 KXPRXPPXEXXXPXXXPXSXXFSXVPPPGLGKXKXXPXXXXKTXXXPHXPXGLGLFXXET 589
K P PP + + S +PP G P T P P GL T
Sbjct: 682 KIPLPPPTKMNLSAPSTSAGGSSALPPI-TGGPPPPPGLPPITGGPPPPPPPGGL-PPIT 739
Query: 588 AXXPKXXNPFXPGVGXVXXXKXXPPPPPPXX*KKKNPPXXFPXXXXPKXXPPKXQGXPFX 409
P P G+ + PPPPP PP P PP P
Sbjct: 740 GGPPPPPPP--GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMA 797
Query: 408 PKXXLFFXP 382
P + P
Sbjct: 798 PVIPDYLPP 806
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 776 GPPPPXXRFXXXVLFXGRXRPPLXXFXXPXGGXPPXKTPP 895
GPPPP + G PP P G PP PP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 42.3 bits (95), Expect = 5e-04
Identities = 34/109 (31%), Positives = 36/109 (33%)
Frame = -1
Query: 751 PXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQX 572
P G P P G PP P P PP PP G + +
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG-----PPPPPPPGGLPPISGGPPPP 344
Query: 571 XKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXP 425
P PGG PPPPPP K PPP P F P AP P
Sbjct: 345 PPP--PGG-----CPPPPPPPPPGGFKGGPPPPPPPGMFAPM--APVIP 384
Score = 31.9 bits (69), Expect = 0.64
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -1
Query: 880 GGXAPPXXXKXXEGGAXPPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFF 701
GG PP GG PPP G P P P G P P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPP--- 348
Query: 700 XGAPPRPGXXKXXPXXXXXNPLXPPXP 620
G PP P P P PP P
Sbjct: 349 GGCPPPP--PPPPPGGFKGGPPPPPPP 373
Score = 29.1 bits (62), Expect = 4.5
Identities = 31/129 (24%), Positives = 37/129 (28%)
Frame = -2
Query: 768 KXPRXPPXEXXXPXXXPXSXXFSXVPPPGLGKXKXXPXXXXKTXXXPHXPXGLGLFXXET 589
K P PP + + S +PP G P T P P GL T
Sbjct: 265 KIPLPPPTKMNLSAPSTSAGGSSALPPI-TGGPPPPPGLPPITGGPPPPPPPGGL-PPIT 322
Query: 588 AXXPKXXNPFXPGVGXVXXXKXXPPPPPPXX*KKKNPPXXFPXXXXPKXXPPKXQGXPFX 409
P P G+ + PPPPP PP P PP P
Sbjct: 323 GGPPPPPPP--GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMA 380
Query: 408 PKXXLFFXP 382
P + P
Sbjct: 381 PVIPDYLPP 389
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 776 GPPPPXXRFXXXVLFXGRXRPPLXXFXXPXGGXPPXKTPP 895
GPPPP + G PP P G PP PP
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/138 (26%), Positives = 43/138 (31%)
Frame = -1
Query: 829 PPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXX 650
PPP K G P P G P P G+PP P P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT------GSPPPPPAGGSPPPPR 293
Query: 649 XXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPX 470
+P PP PP R S P GG PPPPP +K++ P
Sbjct: 294 AGSP--PPPPP------PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP---RQKRQAPER 342
Query: 469 XPXXFXPQXXAPKXPRXP 416
P P +P R P
Sbjct: 343 SPPTGSPPTGSPPTGRPP 360
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/138 (26%), Positives = 43/138 (31%)
Frame = -1
Query: 829 PPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXX 650
PPP K G P P G P P G+PP P P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT------GSPPPPPAGGSPPPPR 314
Query: 649 XXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPX 470
+P PP PP R S P GG PPPPP +K++ P
Sbjct: 315 AGSP--PPPPP------PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP---RQKRQAPER 363
Query: 469 XPXXFXPQXXAPKXPRXP 416
P P +P R P
Sbjct: 364 SPPTGSPPTGSPPTGRPP 381
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/138 (26%), Positives = 43/138 (31%)
Frame = -1
Query: 829 PPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXX 650
PPP K G P P G P P G+PP P P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT------GSPPPPPAGGSPPPPR 299
Query: 649 XXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPX 470
+P PP PP R S P GG PPPPP +K++ P
Sbjct: 300 AGSP--PPPPP------PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP---RQKRQAPER 348
Query: 469 XPXXFXPQXXAPKXPRXP 416
P P +P R P
Sbjct: 349 SPPTGSPPTGSPPTGRPP 366
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 36.7 bits (81), Expect = 0.023
Identities = 26/77 (33%), Positives = 28/77 (36%)
Frame = -1
Query: 694 APPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPP 515
APP P P P PP PP G+ S A P+ PG PP
Sbjct: 487 APPPP----PMPSINGHAPNPPPPPPLLGIAPM--STNAPPPPPM-PGMAPLSTGAPTPP 539
Query: 514 PPPPXXXKKKKPPPXXP 464
PPPP PPP P
Sbjct: 540 PPPPVGMANGGPPPPPP 556
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.039
Identities = 40/144 (27%), Positives = 42/144 (29%)
Frame = -1
Query: 880 GGXAPPXXXKXXEGGAXPPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFF 701
GG APP + G PPP+ G GP PP P
Sbjct: 306 GGYAPPQQQQQQFGA--PPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQS 363
Query: 700 XGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXX 521
G PP P P N PP G S P PGG GG
Sbjct: 364 FGGPPPP--VSSAPG----NFAPPPQSGPPGAFAPPPSAFGA---PQGPGGPGGYGP--- 411
Query: 520 PPPPPPXXXKKKKPPPXXPXXFXP 449
PPP P PP P F P
Sbjct: 412 PPPGGPGAPGSYGPPQGGPGGFGP 435
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/87 (27%), Positives = 26/87 (29%)
Frame = -1
Query: 880 GGXAPPXXXKXXEGGAXPPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFF 701
G APP + GA PP G G G PP P G P
Sbjct: 376 GNFAPPP--QSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPG-SYGPPQGGPGG 432
Query: 700 XGAPPRPGXXKXXPXXXXXNPLXPPXP 620
G PP G P P+ P P
Sbjct: 433 FGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 28.3 bits (60), Expect = 7.9
Identities = 37/156 (23%), Positives = 42/156 (26%), Gaps = 1/156 (0%)
Frame = -2
Query: 879 GGXPPXGXXKXXRGGRXRPXKRTQXXXRXXGGGGPXXKXPRXP-PXEXXXPXXXPXSXXF 703
G PP G + G P Q G P + P P P S
Sbjct: 319 GAPPPQGAPQQGFGAP--PQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPG 376
Query: 702 SXVPPPGLGKXKXXPXXXXKTXXXPHXPXGLGLFXXETAXXPKXXNPFXPGVGXVXXXKX 523
+ PPP G P P G G + P + P G
Sbjct: 377 NFAPPPQSGPPGAFAPPP-SAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFG- 434
Query: 522 XPPPPPPXX*KKKNPPXXFPXXXXPKXXPPKXQGXP 415
PPPP PP FP P PP G P
Sbjct: 435 --PPPPGGPGAYGPPPTGFPPVGAP---PPGAAGAP 465
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.5 bits (78), Expect = 0.052
Identities = 25/75 (33%), Positives = 25/75 (33%)
Frame = -1
Query: 628 PXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXP 449
P PP G I A P P GG PPPPP PPP P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGG-------IPPPPPMFGAPPPPPPPSGLGVAP 127
Query: 448 QXXAPKXPRXPLFXK 404
Q PK P P K
Sbjct: 128 QPPRPKTPVNPALAK 142
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.052
Identities = 26/95 (27%), Positives = 27/95 (28%), Gaps = 3/95 (3%)
Frame = -1
Query: 691 PPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPP 512
PP PG P PP PP G P P G PPP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP-PPSRFGPPGMGGMPPP 336
Query: 511 PPPXXXKKKKPPPXXPXXF---XPQXXAPKXPRXP 416
PPP PP P + P P P P
Sbjct: 337 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/104 (27%), Positives = 30/104 (28%), Gaps = 2/104 (1%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIX 599
P P P RP P + PP PG P P PP PP
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGM----PGMPPPPP-----P 322
Query: 598 XRNSXXAQXXKPLXPGGGGGXXTQXXPPPPP--PXXXKKKKPPP 473
R P P G PPPPP P PPP
Sbjct: 323 SRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 366
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/94 (27%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNP--LXPPXPPWXGV 605
P P P G P P G PP G P P + PP PP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFG-PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 357
Query: 604 IXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPP 503
+P P G G PPPPPP
Sbjct: 358 AGPGMYPPPPPSRPPAPPSGHGMI----PPPPPP 387
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 520 PPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
PPP PP +PPP P P R P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP 308
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.052
Identities = 26/95 (27%), Positives = 27/95 (28%), Gaps = 3/95 (3%)
Frame = -1
Query: 691 PPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPP 512
PP PG P PP PP G P P G PPP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP-PPSRFGPPGMGGMPPP 346
Query: 511 PPPXXXKKKKPPPXXPXXF---XPQXXAPKXPRXP 416
PPP PP P + P P P P
Sbjct: 347 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/104 (27%), Positives = 30/104 (28%), Gaps = 2/104 (1%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIX 599
P P P RP P + PP PG P P PP PP
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGM----PGMPPPPP-----P 332
Query: 598 XRNSXXAQXXKPLXPGGGGGXXTQXXPPPPP--PXXXKKKKPPP 473
R P P G PPPPP P PPP
Sbjct: 333 SRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 376
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/94 (27%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNP--LXPPXPPWXGV 605
P P P G P P G PP G P P + PP PP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFG-PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 367
Query: 604 IXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPP 503
+P P G G PPPPPP
Sbjct: 368 AGPGMYPPPPPSRPPAPPSGHGMI----PPPPPP 397
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 520 PPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
PPP PP +PPP P P R P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTP 318
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 34.7 bits (76), Expect = 0.091
Identities = 35/154 (22%), Positives = 47/154 (30%), Gaps = 1/154 (0%)
Frame = -1
Query: 868 PPXXXKXXEGGAXPP-PKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFFXGA 692
PP + +G PP P+++ G G GP P P P P + GA
Sbjct: 707 PPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRP--PAGFAPPPGAPYG--YPPGA 762
Query: 691 PPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPP 512
PP G P +P W + Q + PGG P
Sbjct: 763 PPPAGFHPSHPQ----HPQHAQYLAWQQQRYHQQQQHQQQQQQGAPGGPRPPYPYPGGPV 818
Query: 511 PPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXPLF 410
PP + PPP P A + P +
Sbjct: 819 PPGPPQNRMPPPPPAQGAPSPSGAAGSNGKQPRY 852
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 565 PLXPGGGGGXXTQXXPPPPPPXXXKKKKPP 476
P PGGGGG P PP P + +PP
Sbjct: 628 PRGPGGGGGGGPTGPPAPPKPPAKPRGRPP 657
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -1
Query: 640 PLXPPXPPWX-GVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPP 503
P PP PP G I N+ A PL P G G PPPPPP
Sbjct: 212 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGA--PPPPPPPPPP 256
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 565 PLXPGGGGGXXTQXXPPPPPPXXXKKKKPP 476
P PGGGGG P PP P + +PP
Sbjct: 628 PRGPGGGGGGGPTGPPAPPKPPAKPRGRPP 657
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -1
Query: 640 PLXPPXPPWX-GVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPP 503
P PP PP G I N+ A PL P G G PPPPPP
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGA--PPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -1
Query: 640 PLXPPXPPWX-GVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPP 503
P PP PP G I N+ A PL P G G PPPPPP
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGA--PPPPPPPPPP 242
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -1
Query: 562 LXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAP 434
L GGGGG PPPPP PP P P+ P
Sbjct: 19 LPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLP 61
Score = 32.3 bits (70), Expect = 0.49
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 562 LXPGGGGGXXTQXXPPPPPPXXXKKKKPPP 473
L P GGGG PPPPPP PP
Sbjct: 18 LLPSGGGGGCGCAPPPPPPPCGCGAPALPP 47
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -1
Query: 562 LXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAP 434
L GGGGG PPPPP PP P P+ P
Sbjct: 19 LPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLP 61
Score = 32.3 bits (70), Expect = 0.49
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 562 LXPGGGGGXXTQXXPPPPPPXXXKKKKPPP 473
L P GGGG PPPPPP PP
Sbjct: 18 LLPSGGGGGCGCAPPPPPPPCGCGGPSLPP 47
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = -1
Query: 568 KPLXPGGGGGXXTQXX--PPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPR 422
+P GGGGG PPPPPP + +P P PQ P+
Sbjct: 79 RPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQ 129
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -1
Query: 562 LXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAP 434
L GGGGG PPPPP PP P P+ P
Sbjct: 19 LPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLP 61
Score = 32.3 bits (70), Expect = 0.49
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 562 LXPGGGGGXXTQXXPPPPPPXXXKKKKPPP 473
L P GGGG PPPPPP PP
Sbjct: 18 LLPSGGGGGCGCAPPPPPPPCGCGAPALPP 47
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.28
Identities = 47/209 (22%), Positives = 53/209 (25%), Gaps = 16/209 (7%)
Frame = -1
Query: 868 PPXXXKXXEGGAXPPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFFXGAP 689
PP K G PPP + G G PP P G P P A
Sbjct: 33 PPPPPKGT--GTPPPPPTGEPQDLS--GEGNASRRPPPPPKGTGTPPPPPTGEPQDLSA- 87
Query: 688 PRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXX-------- 533
G P PP PP A P P G G
Sbjct: 88 -EEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQ 146
Query: 532 -------TQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXPLFXKKXTFFXPXXX 374
PPPPP PP P + A + P P K T P
Sbjct: 147 DLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPP---PKGTGTPPPPP 203
Query: 373 XXXPKNXXXFSXFGXXXTPPXWG-XPPSP 290
P++ PP G P+P
Sbjct: 204 TGEPQDLSAEGYASRRPPPPPKGTGSPTP 232
Score = 31.9 bits (69), Expect = 0.64
Identities = 41/182 (22%), Positives = 48/182 (26%), Gaps = 2/182 (1%)
Frame = -1
Query: 829 PPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXX 650
PPP K G P P G P G+PP P +
Sbjct: 128 PPPPK------GTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLST 181
Query: 649 XXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPX 470
N P PP G +P G PPPPP PP
Sbjct: 182 EGNASRRPPPPPKGT---GTPPPPPTGEPQDLSAEG--YASRRPPPPPKGTGSPTPPPTG 236
Query: 469 XPXXFXPQXXAPKXPRXPLFXKKXTFFXPXXXXXXPKNXXXFSXFGXXXTPP--XWGXPP 296
P + A + P P K T P P++ PP G PP
Sbjct: 237 EPQDLSGEGNASRRPPPP---PKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPP 293
Query: 295 SP 290
P
Sbjct: 294 PP 295
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/87 (25%), Positives = 26/87 (29%), Gaps = 3/87 (3%)
Frame = -1
Query: 541 GXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXPLFXKKXTFFXPXXXXXXP 362
G PPPPP PP P + A + P P K T P P
Sbjct: 26 GETASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPP---PKGTGTPPPPPTGEP 82
Query: 361 KNXXXFSXFGXXXTPP---XWGXPPSP 290
++ PP G PP P
Sbjct: 83 QDLSAEEGNASRRPPPPPKGTGTPPPP 109
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = -1
Query: 631 PPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXP 464
PP PP G++ N P P PPPPPP PPP P
Sbjct: 542 PPPPPIAGLLAA-NGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/94 (26%), Positives = 27/94 (28%), Gaps = 2/94 (2%)
Frame = -1
Query: 691 PPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPG--GGGGXXTQXXP 518
PP PG K +P P PP + P G G P
Sbjct: 513 PPAPGPHKEQRRSTSKDPPRPAPPPVSSI----------PPPPPIAGLLAANGTNVPIPP 562
Query: 517 PPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
PPPPP PP P P P P P
Sbjct: 563 PPPPPLPQNLSGAPPPPPPP-PPMLGGPPPPPPP 595
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 517 PPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
PPPPP + PPP P P P R P
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRP 171
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/91 (26%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Frame = -1
Query: 556 PGGGGGXXTQXXPPPPPPXXXKK--KKPPPXXPXXFXPQXXAPKXPRXPLFXKKXTFFXP 383
P G PPPPPP + PPP P P+ PR P ++ P
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPP----PRVPRTPPPRSPP-PRRPPMTPP 165
Query: 382 XXXXXXPKNXXXFSXFGXXXTPPXWGXPPSP 290
P+ TPP PP P
Sbjct: 166 SPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.9 bits (69), Expect = 0.64
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -1
Query: 553 GGGGGXXTQXXP---PPPPPXXXKKKKPPPXXP 464
GGGGG P PPPPP PPP P
Sbjct: 26 GGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Frame = -1
Query: 565 PLXPGGGGGXXTQXX-----PPPPPPXXXKKKKPPPXXP 464
P+ GGGGG PPPPP PPP P
Sbjct: 21 PMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -1
Query: 532 TQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXP 425
T PPPPPP ++ PP P P AP P
Sbjct: 66 TPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 520 PPPPPPXXXKKKKPPP 473
PPPPPP K PPP
Sbjct: 87 PPPPPPPTLKAPPPPP 102
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 529 QXXPPPPPPXXXKKKKPPPXXP 464
Q PPPPPP K PP P
Sbjct: 81 QQAPPPPPPPPPPTLKAPPPPP 102
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/84 (27%), Positives = 24/84 (28%)
Frame = -1
Query: 763 PPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSX 584
PP P GRP G PG P P P PP +
Sbjct: 114 PPGTPGPAGRPGKPGRPGA--CGNHGNPGKPTGLPCDPVTVPPCKPCPPGPAGEPGHDGA 171
Query: 583 XAQXXKPLXPGGGGGXXTQXXPPP 512
KP PG GGG P P
Sbjct: 172 PGAPGKPGAPGVGGGSGAPGAPGP 195
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.1
Identities = 31/136 (22%), Positives = 35/136 (25%), Gaps = 3/136 (2%)
Frame = -1
Query: 829 PPPKKNXXXEXGXXGXGPXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXX-KXXPXX 653
PPPK E PP P P + A P P P
Sbjct: 31 PPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQN 90
Query: 652 XXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPP--PXXXKKKKP 479
P PP P + A + P PPPPP P P
Sbjct: 91 AVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPP 150
Query: 478 PPXXPXXFXPQXXAPK 431
PP P AP+
Sbjct: 151 PPPAPHSAYIDHSAPR 166
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 556 PGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
P T PPPPPP KP P PQ AP P P
Sbjct: 15 PESAPAATTPQPPPPPPP-----PKPAPYVEQSAQPQQTAPPPPPAP 56
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = -1
Query: 631 PPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFX 452
PP PP S Q P P P PPP + P P P
Sbjct: 28 PPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASY 87
Query: 451 PQXXAP 434
PQ P
Sbjct: 88 PQNAVP 93
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -1
Query: 565 PLXPGGGGGXXTQXXPP-PPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
P+ GG + PP PPPP P P P P P P P
Sbjct: 13 PIASSTFGGCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCP 63
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 520 PPPPPPXXXKKKKPPPXXPXXFXPQXXAP 434
PPPPPP PPP P Q AP
Sbjct: 64 PPPPPPPPPMCPPPPPPMPSYSPCQSYAP 92
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 5/62 (8%)
Frame = -1
Query: 595 RNSXXAQXXKPLXPGGGGGXXTQXXPPPPPPXXXKKKK-----PPPXXPXXFXPQXXAPK 431
R+S + P P T PPPPPP K P P P F P P
Sbjct: 1332 RSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPP 1391
Query: 430 XP 425
P
Sbjct: 1392 PP 1393
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/71 (26%), Positives = 26/71 (36%)
Frame = -1
Query: 688 PRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPPPP 509
P P P P+ PP PP + + P+ P + PPPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTM----SKAPTGVPLPVPPPPPLFSPSMILPPPP 1393
Query: 508 PPXXXKKKKPP 476
PP ++KK P
Sbjct: 1394 PPLPSEEKKNP 1404
Score = 30.3 bits (65), Expect = 2.0
Identities = 35/149 (23%), Positives = 39/149 (26%), Gaps = 13/149 (8%)
Frame = -1
Query: 880 GGXAPPXXXKXXEGGAXPPPKKNXXXEXGXX---GXGPXXEXPPXXPXXXGRPXXXPXXX 710
GG PP G PP + G G P P P G P
Sbjct: 1466 GGPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPMFRGGPPGPGR-GMPSPMMRGS 1524
Query: 709 XFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGG----- 545
G P R G P + PP G+ P P GG
Sbjct: 1525 SMRGGFPQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQG 1584
Query: 544 -----GGXXTQXXPPPPPPXXXKKKKPPP 473
GG + PPP P PPP
Sbjct: 1585 PPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = -1
Query: 520 PPPPPPXXXKKKKPPPXXPXXFXPQXXA----PKXPRXPLF 410
PPPPPP PPP P + P P PLF
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLF 1383
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +1
Query: 739 PLXGGXSGGFPXRAPXPXXPXXXLXSFXGAGPPPPXXFXXXXGGXXPP 882
P+ GG G + P P + G GPPPP G PP
Sbjct: 1438 PVMGGHEGSWRGGPPMRGMPPLGMMRGRG-GPPPPRGMNSPMRGMPPP 1484
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/90 (25%), Positives = 25/90 (27%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIX 599
P + P P G P G PP+P K P P PP P
Sbjct: 119 PGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPP--GPPGPAGPPGPKGLPGPQ 176
Query: 598 XRNSXXAQXXKPLXPGGGGGXXTQXXPPPP 509
Q P PG G Q P P
Sbjct: 177 GDAGTSGQDGVPGLPGPPGPSGPQGAPGVP 206
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/107 (27%), Positives = 31/107 (28%), Gaps = 2/107 (1%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIX 599
P + PP P G P G P RPG P PP
Sbjct: 151 PCPQGPPGPPGPPGAPGDPGEA-----GTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQ 205
Query: 598 XRNSXXAQXXKPLXPG--GGGGXXTQXXPPPPPPXXXKKKKPPPXXP 464
AQ +PL PG G G PP PP P P P
Sbjct: 206 GDAGTPAQS-EPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGP 251
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 5/86 (5%)
Frame = -1
Query: 706 FFXGAPPRPGXXKXXPXXXXXNP-----LXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGG 542
F G P +P K P PP PP V + G
Sbjct: 91 FANGMPMKPSENKIRRATTSIGPPPTASSAPPVPPPAPVPAVEGKKPSIVSSSSFSHHGA 150
Query: 541 GXXTQXXPPPPPPXXXKKKKPPPXXP 464
PPPPPP KP P P
Sbjct: 151 TSSAPPPPPPPPPVSVPSSKPTPPPP 176
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 5/86 (5%)
Frame = -1
Query: 706 FFXGAPPRPGXXKXXPXXXXXNP-----LXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGG 542
F G P +P K P PP PP V + G
Sbjct: 91 FANGMPMKPSENKIRRATTSIGPPPTASSAPPVPPPAPVPAVEGKKPSIVSSSSFSHHGA 150
Query: 541 GXXTQXXPPPPPPXXXKKKKPPPXXP 464
PPPPPP KP P P
Sbjct: 151 TSSAPPPPPPPPPVSVPSSKPTPPPP 176
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 30.3 bits (65), Expect = 2.0
Identities = 29/107 (27%), Positives = 31/107 (28%), Gaps = 2/107 (1%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIX 599
P + PP P G P G P RPG P PP
Sbjct: 151 PCPQGPPGPPGPPGAPGDPGEA-----GTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQ 205
Query: 598 XRNSXXAQXXKPLXPG--GGGGXXTQXXPPPPPPXXXKKKKPPPXXP 464
AQ +PL PG G G PP PP P P P
Sbjct: 206 GDAGTPAQS-EPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGP 251
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.6
Identities = 28/120 (23%), Positives = 33/120 (27%), Gaps = 2/120 (1%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXX-PXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVI 602
P + P P G+P G PP+ P P PP PP I
Sbjct: 92 PGPQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGI 151
Query: 601 XXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPPXXXKKKKP-PPXXPXXFXPQXXAPKXP 425
N + P P G P PP + P P P P P P
Sbjct: 152 PGDNGPPGEQG-PKGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGP 210
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.6
Identities = 27/102 (26%), Positives = 27/102 (26%)
Frame = +2
Query: 485 FFFXXXGGGGGGXXLXXXTXPTPGXKGFXXLGXXAVSXXNNPXPXGXWGXQXVXXXXXGX 664
F F GGGGGG G G G P G G G
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGG 77
Query: 665 XFXXPRPGGGTXEKXXXXGXXXGXXXSXGGXRGXFXXGPPPP 790
GGG G G GG G PPPP
Sbjct: 78 GCGG---GGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 553 GGGGGXXTQXXPPPPPP 503
GGGGG PPPPPP
Sbjct: 43 GGGGGCGGGCAPPPPPP 59
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 553 GGGGGXXTQXXPPPPPP 503
GGGGG PPPPPP
Sbjct: 100 GGGGGCGGGCAPPPPPP 116
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 553 GGGGGXXTQXXPPPPPPXXXKKKKPPP 473
GGGGG PPPPP P P
Sbjct: 31 GGGGGGGDAAPPPPPPADAAPAPAPAP 57
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 550 GGGGXXTQXXPPPPPPXXXKKKKPPPXXP 464
GGGG PPPPPP P P
Sbjct: 31 GGGGGGGDAAPPPPPPADAAPAPAPAPEP 59
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -1
Query: 553 GGGGGXXTQXXPPPPPP---XXXKKKKPPPXXPXXF 455
G GGG PPPPPP +KK+ P P F
Sbjct: 56 GYGGGYGCGIPPPPPPPPQCGCGRKKRSLPEKPTFF 91
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/93 (26%), Positives = 26/93 (27%), Gaps = 4/93 (4%)
Frame = -1
Query: 769 EXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWX----GVI 602
E PP P G P + G PG P PP PP G
Sbjct: 182 ECPPGPPGPTGAPGDKGSRG--YPGESGEPGTPGSAGPKGNAGPAGPPGPPGYPGRPGET 239
Query: 601 XXRNSXXAQXXKPLXPGGGGGXXTQXXPPPPPP 503
A P PG G Q P PP P
Sbjct: 240 GDHGKTIAGEAPPGPPGRQGEMGPQGPPGPPGP 272
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -2
Query: 630 PHXPXGLGLFXXETAXXPKXXNPFXPGVGXVXXXKXXPPPPPP 502
P P G+ +A P P G+ V PPPPPP
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
Score = 29.1 bits (62), Expect = 4.5
Identities = 29/123 (23%), Positives = 33/123 (26%), Gaps = 2/123 (1%)
Frame = -1
Query: 871 APPXXXKXXEGGAXPPPKKNXXXEXGXXGXGPXXEXP--PXXPXXXGRPXXXPXXXXFFX 698
APP + G P G G P P P RP P
Sbjct: 557 APPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPP--- 613
Query: 697 GAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXP 518
PP P P P PP PP + + P P G GG +
Sbjct: 614 --PPPPQSFGMAPISSAAPPPPPPPPPMG--LPAVGAGAPPPPPPPPPSGAGGPASVLAK 669
Query: 517 PPP 509
PP
Sbjct: 670 LPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -2
Query: 630 PHXPXGLGLFXXETAXXPKXXNPFXPGVGXVXXXKXXPPPPPP 502
P P G+ +A P P G+ V PPPPPP
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
Score = 29.1 bits (62), Expect = 4.5
Identities = 29/123 (23%), Positives = 33/123 (26%), Gaps = 2/123 (1%)
Frame = -1
Query: 871 APPXXXKXXEGGAXPPPKKNXXXEXGXXGXGPXXEXP--PXXPXXXGRPXXXPXXXXFFX 698
APP + G P G G P P P RP P
Sbjct: 383 APPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPP--- 439
Query: 697 GAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXP 518
PP P P P PP PP + + P P G GG +
Sbjct: 440 --PPPPQSFGMAPISSAAPPPPPPPPPMG--LPAVGAGAPPPPPPPPPSGAGGPASVLAK 495
Query: 517 PPP 509
PP
Sbjct: 496 LPP 498
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 553 GGGGGXXTQXXPPPPPP 503
GGGGG PPPPPP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.5
Identities = 28/107 (26%), Positives = 30/107 (28%), Gaps = 2/107 (1%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWX-GVI 602
P + PP P G P G P RPG P PP P G
Sbjct: 149 PCPQGPPGPPGPPGAPGDPGEA-----GTPGRPGTDAAP---GSPGPRGPPGPAGEAGAP 200
Query: 601 XXRNSXXAQXX-KPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXP 464
+PL PG G P PP P PP P
Sbjct: 201 GPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPP 247
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -1
Query: 568 KPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
KP PG G T P PP + PPP P P P P P
Sbjct: 115 KPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGP-PGPPGPPGAP 164
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 520 PPPPPPXXXKKKKPPPXXPXXF 455
PPPPPP + PPP P +
Sbjct: 41 PPPPPPCGGGYEAPPPPPPPSY 62
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 565 PLXPGGGGGXXTQXXPPPPPPXXXKKKKPPP 473
P PG GGG P PP KPPP
Sbjct: 189 PGGPGSGGGGGGPGGYPSAPPPYDDYSKPPP 219
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 4.5
Identities = 28/107 (26%), Positives = 30/107 (28%), Gaps = 2/107 (1%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWX-GVI 602
P + PP P G P G P RPG P PP P G
Sbjct: 144 PCPQGPPGPPGPPGAPGDPGEA-----GTPGRPGTDAAP---GSPGPRGPPGPAGEAGAP 195
Query: 601 XXRNSXXAQXX-KPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXP 464
+PL PG G P PP P PP P
Sbjct: 196 GPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPP 242
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -1
Query: 568 KPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
KP PG G T P PP + PPP P P P P P
Sbjct: 110 KPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGP-PGPPGPPGAP 159
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/120 (21%), Positives = 32/120 (26%), Gaps = 4/120 (3%)
Frame = -1
Query: 763 PPXXPXXXGRPXXXPXXXXFFXGAPPRP-GXXKXXPXXXXXNPLXPPXPPWXGVIXXRNS 587
P P +P P P+P G P P P PP G +
Sbjct: 162 PSVEPSEDPQPSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEP-SPSGPPSPGPVDPSED 220
Query: 586 XXAQXXK---PLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
P+ P PP PP ++ PP P P P R P
Sbjct: 221 PKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 4.5
Identities = 28/107 (26%), Positives = 30/107 (28%), Gaps = 2/107 (1%)
Frame = -1
Query: 778 PXXEXPPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWX-GVI 602
P + PP P G P G P RPG P PP P G
Sbjct: 144 PCPQGPPGPPGPPGAPGDPGEA-----GTPGRPGTDAAP---GSPGPRGPPGPAGEAGAP 195
Query: 601 XXRNSXXAQXX-KPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXP 464
+PL PG G P PP P PP P
Sbjct: 196 GPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPP 242
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -1
Query: 568 KPLXPGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
KP PG G T P PP + PPP P P P P P
Sbjct: 110 KPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGP-PGPPGPPGAP 159
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/93 (24%), Positives = 25/93 (26%), Gaps = 1/93 (1%)
Frame = -1
Query: 691 PPRPGXXKXXPXXXXXNPLXP-PXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXPP 515
PP P P P P PP G R + P G P
Sbjct: 78 PPGPSGPSGPPVYHNQGPPRGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFP 137
Query: 514 PPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
P PP P P P P P+ P P
Sbjct: 138 PGPPRPHFPGPPGPHRPPEHYPGPPRPQAPAAP 170
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -1
Query: 568 KPLXPGGGGGXXTQXXPPPPPPXXX---KKKKPPPXXPXXFXPQXXAPKXPRXPLFXKK 401
KP G + PPPPPP K PPP + K P P KK
Sbjct: 36 KPKKKKDVSGAPSAESPPPPPPAPKVPEPPKAPPPADAVKKIEEKGEEKKPEEPAKSKK 94
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 553 GGGGGXXTQXXPPPPPPXXXKKKKPPPXXP 464
GGGG PPPPPP PPP P
Sbjct: 291 GGGGYSAPAAAPPPPPP------PPPPPAP 314
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 553 GGGGGXXTQXXPPPPPPXXXKKKKPPPXXP 464
GGGG PPPPPP PPP P
Sbjct: 291 GGGGYSAPAAAPPPPPP------PPPPPAP 314
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -1
Query: 517 PPPPPXXXKKKKPPPXXPXXFXPQXXAPKXP 425
PPPPP + PPP P P P P
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPPPMPCPPPP 85
>AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 4
protein.
Length = 523
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 519 PPPPPPXX*KKKNPPXXFPXXXXPKXXPPK-XQGXP 415
P PPPP ++ PP P PP+ QG P
Sbjct: 207 PQPPPPQQQSQQQPPLEMRQIPNPNQIPPQMVQGGP 242
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 562 LXPGGGGGXXTQXXPPPPPPXXXKKKKPPP 473
L P GGGG PPPP PPP
Sbjct: 18 LFPSGGGGGCGCAPPPPPACGCGGGAAPPP 47
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -1
Query: 592 NSXXAQXXKPLXPGGGGGXXTQXXPPPPPP 503
N+ + KP G G PPPPPP
Sbjct: 511 NNGNGRPMKPPSSSGSGSNRRSGPPPPPPP 540
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = -1
Query: 697 GAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXP 518
GAP PG P P PP PP + P PG Q P
Sbjct: 184 GAPGGPGAPGNTPSGGAAGPPGPPGPPGG---PGNDGQPGGPGNPGAPGAVTEVPGQQGP 240
Query: 517 PPPP 506
P PP
Sbjct: 241 PGPP 244
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 550 GGGGXXTQXXPPPPP 506
GGGG Q PPPPP
Sbjct: 108 GGGGAYAQAPPPPPP 122
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 520 PPPPPPXXXKKKKPPPXXP 464
PPPPPP K +PP P
Sbjct: 52 PPPPPPPAPKVPEPPKAPP 70
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 562 LXPGGGGGXXTQXXPPPPP 506
L P GGGG PPPPP
Sbjct: 18 LLPSGGGGGCGCAPPPPPP 36
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 562 LXPGGGGGXXTQXXPPPPPP 503
L GGGGG PPPP P
Sbjct: 19 LPSGGGGGCGCAPPPPPPSP 38
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 7.9
Identities = 25/94 (26%), Positives = 29/94 (30%)
Frame = -1
Query: 697 GAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXP 518
G PP+ +P PP + AQ P GGG Q P
Sbjct: 631 GGPPQQAYRYPPQQGQQYSPYPPPQQQ-----QQHQAQQAQSQAHYGPPGGG----QGPP 681
Query: 517 PPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
PPP PPP P P P+ R P
Sbjct: 682 PPPQGQQYYGGPPPPGQPYG-PPGGYPPQQQRPP 714
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 7.9
Identities = 25/94 (26%), Positives = 29/94 (30%)
Frame = -1
Query: 697 GAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSXXAQXXKPLXPGGGGGXXTQXXP 518
G PP+ +P PP + AQ P GGG Q P
Sbjct: 631 GGPPQQAYRYPPQQGQQYSPYPPPQQQ-----QQHQAQQAQSQAHYGPPGGG----QGPP 681
Query: 517 PPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
PPP PPP P P P+ R P
Sbjct: 682 PPPQGQQYYGGPPPPGQPYG-PPGGYPPQQQRPP 714
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 520 PPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXPLFXKK 401
PPPPPP K PP P P+ A + PL+ +K
Sbjct: 91 PPPPPP---KPTIRPPPIPASPPPRPPASEPVGIPLYSEK 127
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 520 PPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXPLFXKK 401
PPPPPP K PP P P+ A + PL+ +K
Sbjct: 313 PPPPPP---KPTIRPPPIPASPPPRPPASEPVGIPLYSEK 349
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 562 LXPGGGGGXXTQXXPPPPP 506
L P GGGG PPPPP
Sbjct: 18 LFPSGGGGGCGCAPPPPPP 36
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.9
Identities = 24/96 (25%), Positives = 26/96 (27%)
Frame = -1
Query: 763 PPXXPXXXGRPXXXPXXXXFFXGAPPRPGXXKXXPXXXXXNPLXPPXPPWXGVIXXRNSX 584
PP P P + APP PG P P PP N+
Sbjct: 695 PPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNA- 753
Query: 583 XAQXXKPLXPGGGGGXXTQXXPPPPPPXXXKKKKPP 476
P P G G PPPP PP
Sbjct: 754 ----GAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPP 785
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 553 GGGGGXXTQXXPPPPP-PXXXKKKKPPPXXPXXF 455
GGGGG PPPP +KK+ P P F
Sbjct: 25 GGGGGCGCGAPPPPPACGCGGRKKRSLPEKPEFF 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,939,566
Number of Sequences: 27780
Number of extensions: 317597
Number of successful extensions: 3604
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1934
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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