Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_C14
(926 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 33 0.22
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.22
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.29
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.88
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.88
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.88
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.0
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 30 2.7
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.7
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.2
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 6.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 6.2
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 6.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 8.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 8.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 8.2
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = -3
Query: 384 FPXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGGAPAR 220
+P PRG P P ++ P GA P P+ GP PP G P R
Sbjct: 159 YPPPRGY------PPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPPQR 207
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = +1
Query: 619 PRXXXFXXXGPQGXPXPXXGPVXGVFXXXXPPPGKXXKXPPPXXXGGAXPPG 774
PR P+G P P GV+ PPPG PPP G PPG
Sbjct: 152 PRGMPGAYPPPRGYPP---APAPGVYM---PPPGMPGAYPPPRMPIGHGPPG 197
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = -3
Query: 384 FPXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGGAPAR 220
+P PRG P P ++ P GA P P+ GP PP G P R
Sbjct: 159 YPPPRGY------PPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPPQR 207
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = +1
Query: 619 PRXXXFXXXGPQGXPXPXXGPVXGVFXXXXPPPGKXXKXPPPXXXGGAXPPG 774
PR P+G P P GV+ PPPG PPP G PPG
Sbjct: 152 PRGMPGAYPPPRGYPP---APAPGVYM---PPPGMPGAYPPPRMPIGHGPPG 197
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +2
Query: 644 GXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
G P G PP G G+ PPP PP G PPP
Sbjct: 1553 GPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPP 1594
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXX----PPPLEXXXKXLPPXXGGXPPP 769
P GG P G G PP G P PP L PP GG PPP
Sbjct: 1554 PPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +2
Query: 632 FFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
F P G PP F G P PPP+ PP G PPP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIP-PPPPMMGGIPPPPPMFGAPPPP 117
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 348 PPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGGAP 226
PP P I P GG P P + G P PP GG P
Sbjct: 66 PPPVPNGFI-PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIP 105
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 387 FFPXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGG 232
F P P G PP I P GG P P G P PPP G
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP--PMFGAPPPPPPPSG 122
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 646 GPQGXPXPXXGPVXGVFXXXXPPPGKXXKXPPPXXXGGAXPP 771
GP G P P G+ PPP PPP GA PP
Sbjct: 79 GPGGIPPPPPMFAGGI----PPPPPMMGGIPPPPPMFGAPPP 116
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Frame = -3
Query: 381 PXPRGXQK-TXGPPXXPKKXIFSPXXXXGGAXPXPKA-----TSXGGPXXPPPXGGAP 226
P P G T GPP P P GG P P S G P PPP GG P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPP----PLEXXXKXLPPXXGGXPPP 769
P GG P P P G PP G G P PP P+ PP GG PPP
Sbjct: 721 PITGGPP------PPPPPGGLPPITG---GPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPP 715
P GG P G P PP G F G P PPP
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -3
Query: 381 PXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGG 232
P P G G P P P G P P P PPP GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +1
Query: 646 GPQGXPXPXX-GPVXGVFXXXXPPPGKXXKXPPPXXXGG 759
GP P P P+ G PPPG PPP GG
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = -3
Query: 357 TXGPPXXPKKXIFSPXXXXGGAXPXPKA---TSXGGPXXPPPXGGAP 226
T GPP P P G P P GGP PPP GG P
Sbjct: 710 TGGPPPPPGL----PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Frame = -3
Query: 381 PXPRGXQK-TXGPPXXPKKXIFSPXXXXGGAXPXPKA-----TSXGGPXXPPPXGGAP 226
P P G T GPP P P GG P P S G P PPP GG P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPP----PLEXXXKXLPPXXGGXPPP 769
P GG P P P G PP G G P PP P+ PP GG PPP
Sbjct: 721 PITGGPP------PPPPPGGLPPITG---GPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPP 715
P GG P G P PP G F G P PPP
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -3
Query: 381 PXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGG 232
P P G G P P P G P P P PPP GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +1
Query: 646 GPQGXPXPXX-GPVXGVFXXXXPPPGKXXKXPPPXXXGG 759
GP P P P+ G PPPG PPP GG
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = -3
Query: 357 TXGPPXXPKKXIFSPXXXXGGAXPXPKA---TSXGGPXXPPPXGGAP 226
T GPP P P G P P GGP PPP GG P
Sbjct: 710 TGGPPPPPGL----PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Frame = -3
Query: 381 PXPRGXQK-TXGPPXXPKKXIFSPXXXXGGAXPXPKA-----TSXGGPXXPPPXGGAP 226
P P G T GPP P P GG P P S G P PPP GG P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPIT--GGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPP----PLEXXXKXLPPXXGGXPPP 769
P GG P P P G PP G G P PP P+ PP GG PPP
Sbjct: 304 PITGGPP------PPPPPGGLPPITG---GPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPP 715
P GG P G P PP G F G P PPP
Sbjct: 336 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -3
Query: 381 PXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGG 232
P P G G P P P G P P P PPP GG
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +1
Query: 646 GPQGXPXPXX-GPVXGVFXXXXPPPGKXXKXPPPXXXGG 759
GP P P P+ G PPPG PPP GG
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = -3
Query: 357 TXGPPXXPKKXIFSPXXXXGGAXPXPKA---TSXGGPXXPPPXGGAP 226
T GPP P P G P P GGP PPP GG P
Sbjct: 293 TGGPPPPPGL----PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 335
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 236 PPSGGPPGP-FDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP-SGGPPGP 289
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 326 PPSGGPPGP-FDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP-SGGPPGP 379
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 386 PPSGGPPGP-FDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP-SGGPPGP 439
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 401 PPSGGPPGP-FNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP-SGGPPGP 454
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 416 PPSGGPPGP-FNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP-SGGPPGP 469
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 431 PPSGGPPGP-FNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP-SGGPPGP 484
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 446 PPSGGPPGP-FNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP-SGGPPGP 499
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 146 PPSGGPPGP-FDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPP-SGGPPGP 199
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 221 PPSGGPPGP-FNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP-SGGPPGP 274
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 251 PPSGGPPGP-FNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPP-SGGPPGP 304
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 281 PPSGGPPGP-FDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPP-SGGPPGP 334
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 341 PPSGGPPGP-FNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPP-SGGPPGP 394
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 356 PPSGGPPGP-FDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPP-SGGPPGP 409
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 371 PPSGGPPGP-FDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP-SGGPPGP 424
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG PG F G P PP G P PP PP GG P P
Sbjct: 461 PPSGGPPGP-FNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP-SGGPPGP 514
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPP 766
P GG PG F G P PP G P PP PP G PP
Sbjct: 476 PPSGGPPGP-FDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP--SGMPP 527
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3
Query: 600 PPXLGXPPGKXFXXXGXPRGPXPXXGAGLXGFXXGXPPPWKXXXKXSPP 746
PP + P G+ R P P G+ G+ G PPP PP
Sbjct: 177 PPPVYPPFGQPAPQMSGQRMPYPYPPQGMPGYPGGPPPPPHGYEGYPPP 225
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +1
Query: 646 GPQGXPXPXXGPVXGVFXXXXPPPGKXXKXPPPXXXGGAXPPG 774
GP+G P P GP F PPG PP GG P G
Sbjct: 217 GPRGTPGPT-GPKN--FYITSGPPGPPGPPGPPGNPGGIGPRG 256
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 9/59 (15%)
Frame = +2
Query: 620 PGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPP---------XXGGXPPP 769
P F G G PP GR G PPP +PP GG PPP
Sbjct: 742 PPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -3
Query: 381 PXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGGAP 226
P PRG T P P + SP G+ P P P PP G P
Sbjct: 301 PPPRGSPPTGSLP--PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -3
Query: 381 PXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGGAP 226
P PRG T P P + SP G+ P P P PP G P
Sbjct: 322 PPPRGSPPTGSLP--PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -3
Query: 381 PXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGGAP 226
P PRG T P P + SP G+ P P P PP G P
Sbjct: 307 PPPRGSPPTGSLP--PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 646 GPQGXPXPXXGPVXGVFXXXXPPPGKXXKXPPPXXXGGAXPPG 774
GP G P P GP PPG PP G A PG
Sbjct: 186 GPAGPPGPA-GPAGEDAAAPESPPGPPGPPGPPGKDGEAGAPG 227
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = +2
Query: 620 PGXXFFXPGXPKGXXPPXXGRFXGFXPXXPP-PLE---XXXKXLPPXXGGXPPP 769
PG G P PP G G P PP PL+ L GG PPP
Sbjct: 526 PGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPP 579
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 665 PPXXGRFXGFXPXXP--PPLEXXXKXLPPXXGGXPPP 769
PP GR G P P PP + PP GG PPP
Sbjct: 301 PPPPGRTPG-PPGMPGMPPPPPPSRFGPPGMGGMPPP 336
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG P P G PP R+ P PP PP G PP
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 665 PPXXGRFXGFXPXXP--PPLEXXXKXLPPXXGGXPPP 769
PP GR G P P PP + PP GG PPP
Sbjct: 311 PPPPGRTPG-PPGMPGMPPPPPPSRFGPPGMGGMPPP 346
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 602 PXFGGXPGXXFFXPGXPKGXXPPXXGRFXGFXPXXPPPLEXXXKXLPPXXGGXPPP 769
P GG P P G PP R+ P PP PP G PP
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 380 PXQGGXKKPXXPPXXPKKXFFPPXXTGGGP 291
P GG P P P P TGGGP
Sbjct: 1437 PSTGGDPSPGPSPNGPSNPSVPESSTGGGP 1466
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = -1
Query: 380 PXQGGXKKPXXPPXXPKKXFFPPXXTGGGPXXPQRXHPXG 261
P KP PP PK PP P P P G
Sbjct: 81 PLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVG 120
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = -1
Query: 380 PXQGGXKKPXXPPXXPKKXFFPPXXTGGGPXXPQRXHPXG 261
P KP PP PK PP P P P G
Sbjct: 303 PLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVG 342
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 381 PXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGGAP 226
P P G GPP P P G P P A GP PP G P
Sbjct: 227 PGPPGAPGNDGPPGPP-----GPKGAPGPDGP-PGADGQSGPPGPPGPAGTP 272
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 381 PXPRGXQKTXGPPXXPKKXIFSPXXXXGGAXPXPKATSXGGPXXPPPXGGAP 226
P P G GPP P P G P P A GP PP G P
Sbjct: 227 PGPPGAPGNDGPPGPP-----GPKGAPGPDGP-PGADGQSGPPGPPGPAGTP 272
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +1
Query: 283 GXXGPPPVXXGGKNXFFGXX-GGXXGFLXPPWXGEKNXXPP 402
G GPPP G +G GG GF PP G PP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPP 447
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = -1
Query: 773 PGGXAPPXXXGGGFXXXFPGGGXXXXKTPQTGPXXGXGXPW--GPXXXKXFXRG 618
PG PP GGF PGG P P G P G F RG
Sbjct: 420 PGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARG 473
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 646 GPQGXPXPXXGPVXGVFXXXXPPPGKXXKXPPPXXXGGAXPPG 774
GP G P P P G PPP G PPG
Sbjct: 181 GPPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPG 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.155 0.566
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,285,135
Number of Sequences: 27780
Number of extensions: 281072
Number of successful extensions: 1244
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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