Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_C12
         (912 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    25   0.72 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   5.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   5.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   5.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   5.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   8.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   8.9  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 25.4 bits (53), Expect = 0.72
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 689 YENKCMPTLGERRPLSVETNV 751
           YEN  +PT G+  P  V+TN+
Sbjct: 48  YENNQLPTHGKGTPTVVKTNI 68


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 182 GIPFSEYYFAYTHNVRMYLYLKTIMNEKGNLQTA 81
           G+PF +        +  Y Y++ IMN++  +  A
Sbjct: 304 GLPFPQRPIWSNFPIYKYKYIREIMNKESRISAA 337


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 182 GIPFSEYYFAYTHNVRMYLYLKTIMNEKGNLQTA 81
           G+PF +        +  Y Y++ IMN++  +  A
Sbjct: 304 GLPFPQRPIWSNFPIYKYKYIREIMNKESRISAA 337


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 504 SDVPLHDACR 475
           SD+PLHDA R
Sbjct: 331 SDIPLHDATR 340


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 216 ITKMNQENESTEVNSENIASTSGVAKNGAAATLVMLKNARDAK 344
           ITK    NES  +    I +  G   +G    L  L+N   AK
Sbjct: 130 ITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIAK 172


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 504 SDVPLHDACR 475
           SD+PLHDA R
Sbjct: 411 SDIPLHDATR 420


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 504 SDVPLHDACR 475
           SD+PLHDA R
Sbjct: 331 SDIPLHDATR 340


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 554 PQRILLPRSRRRGV 595
           P+R+LLP+ ++ G+
Sbjct: 599 PERLLLPKGKKEGM 612


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 554 PQRILLPRSRRRGV 595
           P+R+LLP+ ++ G+
Sbjct: 599 PERLLLPKGKKEGM 612


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,283
Number of Sequences: 438
Number of extensions: 4759
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)