Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_C09
(914 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.24
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 33 0.24
10_08_1008 - 22222051-22222377,22222479-22222640,22223179-222233... 33 0.42
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 32 0.73
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 32 0.73
08_01_0059 - 394001-394708 31 1.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.3
07_03_0089 - 13300902-13301645 30 2.2
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 30 2.2
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 2.9
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 29 5.2
05_01_0142 - 940421-940701,941262-941574 29 5.2
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 6.8
05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608 29 6.8
03_03_0106 - 14500935-14501263,14501357-14501432,14501531-14501542 28 9.0
03_01_0515 - 3864796-3865425 28 9.0
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.5 bits (73), Expect = 0.24
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 583 PKTGXXPXKXXXPKXPKXAXNPKKAXXPXPXQRPPPPXXXFKKXAPP 723
PK P P P A P P PPPP KK PP
Sbjct: 332 PKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
Score = 31.9 bits (69), Expect = 0.73
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +3
Query: 639 PKPXKGPXXRPXXKAPPPXXXX*KGXPPRXXXGKXXKKXXPXP 767
P P KGP P K PPP KG P KK P P
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPP-KGPSPPPPPPPGGKKGGPPP 379
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 33.5 bits (73), Expect = 0.24
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +1
Query: 565 GGXGXXPKTGXXPXKXXXPKXPKXAXNPKKAXXPXPXQRPPPPXXXFKKXAPP 723
GG T P P P P P P RPPPP KK APP
Sbjct: 337 GGTQENNATSDAPKLMPPPPPPPP---PPPPPPPPPPPRPPPPPPPIKKGAPP 386
>10_08_1008 -
22222051-22222377,22222479-22222640,22223179-22223310,
22224556-22224608,22224713-22225256
Length = 405
Score = 32.7 bits (71), Expect = 0.42
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 619 PKXPKXAXNPKKAXXPXPXQRPPPPXXXFKKXAPP 723
P P A P A P +PPPP F + APP
Sbjct: 13 PPAPAAAAPPPAAAPAPPPSQPPPPPLPFAQQAPP 47
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.9 bits (69), Expect = 0.73
Identities = 23/82 (28%), Positives = 27/82 (32%), Gaps = 2/82 (2%)
Frame = +2
Query: 485 GXXPLPPXKNPGAXGX--RXXXGXXPPPXGXXGXPXKPGXXXXKXXXXXXQKXPXTXKRP 658
G P PP NP + G PPP G P Q P P
Sbjct: 17 GFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQ--PQFNFGP 74
Query: 659 XXPXXXKGPPPPEXXLKRXPPP 724
P + PPPP+ + PPP
Sbjct: 75 GPPQQQQPPPPPQMYYQPPPPP 96
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 553 PPXXGGXGXXPKTGXXPXKXXXPKXPKXAXNPKKAXXPXPXQRPPPP 693
PP GG P P P+ P P P P PPPP
Sbjct: 12 PPPQGGFPPQPPP-MNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPP 57
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.9 bits (69), Expect = 0.73
Identities = 24/88 (27%), Positives = 24/88 (27%), Gaps = 8/88 (9%)
Frame = +2
Query: 485 GXXPLPPXKNPGAXGXRXXXGXXPPPXGXXGXPXKPGXXXXKXXXXXXQ-----KXPXTX 649
G P PP P G G PPP P P P
Sbjct: 299 GHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAP 358
Query: 650 KRPXXPXXXKGPPPPEXXLKR---XPPP 724
P P GPPPP R PPP
Sbjct: 359 AAPRPPGPGPGPPPPPGAAGRGGGGPPP 386
>08_01_0059 - 394001-394708
Length = 235
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 619 PKXPKXAXNPKKAXXPXPXQRPPPPXXXFKKXAPP 723
P P+ A P P P + PPPP + PP
Sbjct: 4 PPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPP 38
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/81 (30%), Positives = 25/81 (30%)
Frame = +2
Query: 482 LGXXPLPPXKNPGAXGXRXXXGXXPPPXGXXGXPXKPGXXXXKXXXXXXQKXPXTXKRPX 661
LG P PP P A G R G PPP G P P P
Sbjct: 1157 LGGPPAPP---PPA-GFR---GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPM 1209
Query: 662 XPXXXKGPPPPEXXLKRXPPP 724
P GPPPP PP
Sbjct: 1210 PPGVPGGPPPPPGGRGLPAPP 1230
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +2
Query: 461 RGXGXXFLGXXPLPPXKNPGAXGXRXXXGXXPPPXGXXGXPXKPG 595
RG G +G P PP P G PPP G G P PG
Sbjct: 1190 RGHGG--VGGPPTPPGA-PAPPMPPGVPGGPPPPPGGRGLPAPPG 1231
>07_03_0089 - 13300902-13301645
Length = 247
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +1
Query: 583 PKTGXXPXKXXXPKXPKXAXNPKKAXXPXPXQRPPPPXXXFKKXAPPXXXXEXXXKNXTP 762
PK P PK P +PK P P Q P P K P + N P
Sbjct: 88 PKQDPKPNPQPDPK-PSPQPDPKPTPQPDPKQDPQPNPQPDPKPTPQPNPKQDPQPNPQP 146
Query: 763 D 765
D
Sbjct: 147 D 147
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/71 (30%), Positives = 24/71 (33%)
Frame = +3
Query: 555 PXPGGXXXXPXNRGXPXXKXXAXXPKXGPKPXKGPXXRPXXKAPPPXXXX*KGXPPRXXX 734
P PG + P PK GPKP K P P K PP G P+
Sbjct: 157 PKPGPKPKPKPSPPKPKPGPKPKPPKPGPKP-KPPKPGPKPKPKPPK----PGPKPKPKP 211
Query: 735 GKXXKKXXPXP 767
K K P P
Sbjct: 212 PKPGPKPKPGP 222
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = +3
Query: 627 PKXGPKP---XKGPXXRPXXKAPPPXXXX*KGXPPRXXXGKXXKKXXPXPHXQLLPXXP 794
PK GPKP P +P K PP K PP+ K P P + P P
Sbjct: 157 PKPGPKPKPKPSPPKPKPGPKPKPPKPGP-KPKPPKPGPKPKPKPPKPGPKPKPKPPKP 214
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 554 PPPXGXXGXPXKPGXXXXKXXXXXXQKXPXTXKRPXXPXXXKGPPPPEXXLKRXPPP 724
PPP G P P P T P PPPP L PPP
Sbjct: 1138 PPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPP 1194
>08_01_0774 +
7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +1
Query: 601 PXKXXXPKXPKXAXNPKKAXXPXPXQRPPPP 693
P + P PK + P P P +PPPP
Sbjct: 53 PPELMPPSPPKASPTPPPQPQPHPQLQPPPP 83
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 565 GGXGXXPKTGXXPXKXXXPKXPKXAXNPKKAXXPXPXQRPPPP 693
GG G P G P P P P A P P PPPP
Sbjct: 25 GGHGYPPHQGYPPQ--GYPPPPGAYPPPPGAYPPPPGAYPPPP 65
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +1
Query: 601 PXKXXXPKXPKXAXNPK--KAXXPXPXQRPPPPXXXFKKXAPP 723
P + P PK A P K+ P P + PPP K PP
Sbjct: 586 PPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPGSSKTRPP 628
>05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608
Length = 325
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 628 PKXAXNPKKAXXPX-PXQRPPPPXXXFKKXAPP 723
P+ KKA P P PPPP KK APP
Sbjct: 187 PEALEAKKKAEAPVAPAAAPPPPPPQPKKKAPP 219
>03_03_0106 - 14500935-14501263,14501357-14501432,14501531-14501542
Length = 138
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 619 PKXPKXAXNPKKAXXPXPXQRPPPP 693
P+ PK +P K P P PPPP
Sbjct: 76 PEAPKKPDDPPKKPDPPPPCPPPPP 100
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 553 PPXXGGXGXXPKTGXXPXKXXXPKXPKXAXNPKKAXXPXPXQRPPPPXXXFKKXAPP 723
PP G P P P P A P P PPP K PP
Sbjct: 62 PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPP 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.141 0.473
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,929,893
Number of Sequences: 37544
Number of extensions: 241356
Number of successful extensions: 1350
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -