Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_C08
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   7.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   7.3  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 402 TSMLRSSTMLSQELEPTKKPSSRSCARFPTMVSVP 506
           T+M  SS  +S  + PT   +S SC   P+M   P
Sbjct: 11  TTMATSSNAMSP-MTPTYSMNSMSCVSMPSMNCSP 44


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 449  DEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 577
            D ++  +++C  +N+      A+Y Q  GK L SD+  D   H
Sbjct: 1818 DPKSEFKVVCYFTNW------AWYRQGVGKYLPSDIDPDLCTH 1854


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 145 LVRVVLLSAHVEILLFNS*HTQPTQDRREFRNPKILRNSL 26
           L +V+LLS  V +   N  + +P +    F++ K+L  SL
Sbjct: 28  LKKVLLLSQIVGVFPLNHLNEEPEKLHFTFKSWKVLYTSL 67


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +3

Query: 24  YREFLKILGFRNSLRSCVGWVCQLLNKRIST*ADN 128
           YR +   + F  ++     W+C L+N  +S  ++N
Sbjct: 30  YRLYKIFVVFSFAVTFFSAWICALVNYNVSEISEN 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,271
Number of Sequences: 336
Number of extensions: 3208
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)