Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_C08
         (881 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   2.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   6.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   8.6  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 499 PYHLRILRTTVRQEPRIGLKRRHVGTLQEIVRVVVHGQ 612
           PY   +L++T  + P I L+      L  +V  + HG+
Sbjct: 55  PYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGE 92


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 421 PRCCLRNWNRRRSHHRDPVHAFQLWYP 501
           P CC + W+ ++S  R  +++  L YP
Sbjct: 364 PNCCGK-WSSQKSEPRRSIYSSLLRYP 389


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 35  P*DFGISEFSPVLCWLGVSAVK 100
           P +FG+S+ SPV     VSAV+
Sbjct: 381 PPNFGVSQVSPVSMSALVSAVR 402


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 390 LPCPTSMLRSSTMLSQELEPTKKPS 464
           LPC   M R S    +E + ++KPS
Sbjct: 340 LPCILRMSRPSDKEEREAQKSQKPS 364


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 44  FGISEFSPVLCWLGVSAVKQKNLNMSGQ 127
           FG+   S + CW     ++++N++M  Q
Sbjct: 320 FGLMNNSAIGCWNEHQPLQRENMDMVAQ 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,509
Number of Sequences: 438
Number of extensions: 3889
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)