Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_C07
         (798 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9U1W1 Cluster: Putative uncharacterized protein tfg-1;...    38   0.22 
UniRef50_Q2JH04 Cluster: Serine/threonine protein kinase; n=1; F...    38   0.29 
UniRef50_O41981 Cluster: Putative uncharacterized protein GAMMAH...    35   2.1  
UniRef50_A6GEI9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.6  
UniRef50_Q567Z4 Cluster: Zgc:110626; n=5; Danio rerio|Rep: Zgc:1...    34   4.8  
UniRef50_A0GMB5 Cluster: SH3, type 3 precursor; n=2; Burkholderi...    34   4.8  
UniRef50_UPI0000E494ED Cluster: PREDICTED: similar to FIP1 like ...    33   6.3  
UniRef50_A0NQ34 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  
UniRef50_A5JUU8 Cluster: Formin B; n=2; Trypanosoma brucei|Rep: ...    33   8.3  

>UniRef50_Q9U1W1 Cluster: Putative uncharacterized protein tfg-1;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein tfg-1 - Caenorhabditis elegans
          Length = 486

 Score = 38.3 bits (85), Expect = 0.22
 Identities = 31/96 (32%), Positives = 35/96 (36%), Gaps = 6/96 (6%)
 Frame = -3

Query: 643 GGXPXXFFXGXTPR--GXXPPPFXXFPPXFSPPPXXXXPG-XKKXXAGXGXSXXRG--GG 479
           G  P   F   +P+  G  PPP    P  F+PPP    PG      +  G     G  GG
Sbjct: 349 GAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGG 408

Query: 478 XRPPLSQXP-IXGEXGXPDXXXXPXGFXGPXXGQNG 374
             PP    P   G  G P     P GF  P  G  G
Sbjct: 409 YGPPPPGGPGAPGSYGPPQ--GGPGGFGPPPPGGPG 442


>UniRef50_Q2JH04 Cluster: Serine/threonine protein kinase; n=1;
           Frankia sp. CcI3|Rep: Serine/threonine protein kinase -
           Frankia sp. (strain CcI3)
          Length = 863

 Score = 37.9 bits (84), Expect = 0.29
 Identities = 25/82 (30%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
 Frame = -3

Query: 616 GXTPRGXXPPPFXXFPPXFSPPPXXXXPGXKKXXA--GXGXSXXRGGGXRPPLSQXPIXG 443
           G  P G  PPP    PP  +PPP    PG     A  G G     GG    P    P+ G
Sbjct: 405 GGFPPGNTPPPRSTPPPRSTPPPRSLGPGYGGPDAPGGPGAPGGPGGQTYRPGPGGPVHG 464

Query: 442 EXGXPDXXXXPXGFXGPXXGQN 377
             G P       G       +N
Sbjct: 465 MAGVPPAATRQAGHQSSPNARN 486


>UniRef50_O41981 Cluster: Putative uncharacterized protein
           GAMMAHV.M14; n=1; Murid herpesvirus 4|Rep: Putative
           uncharacterized protein GAMMAHV.M14 - Murid herpesvirus
           4 (MuHV-4) (Murine gammaherpesvirus 68)
          Length = 106

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 23/73 (31%), Positives = 25/73 (34%)
 Frame = -3

Query: 646 GGGXPXXFFXGXTPRGXXPPPFXXFPPXFSPPPXXXXPGXKKXXAGXGXSXXRGGGXRPP 467
           G G P     G   RG  P P    PP   P P    P       G G     GGG RPP
Sbjct: 33  GAGPPPPGVGG---RGRGPLPGRGTPPARPPSPGPGPPQASPASPGPGSPGVGGGGARPP 89

Query: 466 LSQXPIXGEXGXP 428
             +  +    G P
Sbjct: 90  RGEEGLGPCSGMP 102


>UniRef50_A6GEI9 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 534

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 29/109 (26%), Positives = 35/109 (32%), Gaps = 4/109 (3%)
 Frame = -3

Query: 607 PRGXXPPPFXXFPPXFSPPPXXXXP----GXKKXXAGXGXSXXRGGGXRPPLSQXPIXGE 440
           P    PPP    P   +PPP    P    G  +   G       GGG +P     P+   
Sbjct: 300 PAAVAPPPAALPPAEAAPPPAPAQPASTGGGGRRGGGGSRGGGGGGGSKPAPKSSPLNPF 359

Query: 439 XGXPDXXXXPXGFXGPXXGQNGXXIXTPPXSKWWKFXHPVTGNIIIQPG 293
            G       P     P  GQ G    T P ++      P  G    QPG
Sbjct: 360 GGYTPPGENPA--PAPTNGQGGAQPGTQPGTQPAPAPAPAGGG--AQPG 404


>UniRef50_Q567Z4 Cluster: Zgc:110626; n=5; Danio rerio|Rep:
           Zgc:110626 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 454

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 23/73 (31%), Positives = 26/73 (35%)
 Frame = -3

Query: 592 PPPFXXFPPXFSPPPXXXXPGXKKXXAGXGXSXXRGGGXRPPLSQXPIXGEXGXPDXXXX 413
           PPP    P   +PPP           AG        G   PP+ Q P  G  G P     
Sbjct: 331 PPPGIAGP---NPPPTAPS-AQPHNMAGPPGQFSAPGNYGPPVGQFPSPGYPGPPLGQGG 386

Query: 412 PXGFXGPXXGQNG 374
           P  + GP  GQ G
Sbjct: 387 PPSYTGPPLGQFG 399


>UniRef50_A0GMB5 Cluster: SH3, type 3 precursor; n=2;
           Burkholderia|Rep: SH3, type 3 precursor - Burkholderia
           phytofirmans PsJN
          Length = 316

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 18/48 (37%), Positives = 19/48 (39%)
 Frame = -2

Query: 557 PPPPXXXPGXXKXXSGXGGLXPXGXGXKTPXXPXPXFXGTRXPGXXXP 414
           PPPP   PG        GG  P   G + P  P P   G R PG   P
Sbjct: 138 PPPPPPRPGAGWPP---GGRPPGHDGGRPPGGPPPGHGGGRPPGGPPP 182


>UniRef50_UPI0000E494ED Cluster: PREDICTED: similar to FIP1 like 1
           (S. cerevisiae); n=2; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to FIP1 like 1 (S. cerevisiae) -
           Strongylocentrotus purpuratus
          Length = 841

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 31/111 (27%), Positives = 34/111 (30%), Gaps = 2/111 (1%)
 Frame = -3

Query: 640 GXPXXFFX-GXTPRGXXPPPFXXFPPXFSPPPXXXXPGXKKXXAGXGXSXXRGGGXRPPL 464
           G P   F  G  P     PP    PP   PPP     G              G G RPP+
Sbjct: 447 GPPRPMFGDGNYPPQSGGPPMSG-PPMSGPPPPMGMHGGPPPPNMGPPPMGMGRGPRPPM 505

Query: 463 S-QXPIXGEXGXPDXXXXPXGFXGPXXGQNGXXIXTPPXSKWWKFXHPVTG 314
               P+ G  G P     P     P  G +G     PP    W    P  G
Sbjct: 506 GGPPPMMGMQGPPPRMGGP-----PPPGPHGPPPMGPPPGGNWNRPPPPFG 551


>UniRef50_A0NQ34 Cluster: Putative uncharacterized protein; n=1;
           Stappia aggregata IAM 12614|Rep: Putative
           uncharacterized protein - Stappia aggregata IAM 12614
          Length = 533

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
 Frame = -3

Query: 607 PRGXXPPPFXXFPPXFSPPPXXXXPGXKKXXAGXGXSXXRGGGXRPPLSQXPIXGEXG-- 434
           P+   PPP     P  +PP     P       G       GGG R P +  P   E G  
Sbjct: 37  PQQPAPPP----APPHAPPGHAAPPPQHPQSGGADPWQSAGGGGRDPYAPTPAGYEYGQQ 92

Query: 433 -XPDXXXXPXGFXGPXXG 383
             PD    P G+  P  G
Sbjct: 93  QAPDLRTPPGGYQTPQGG 110


>UniRef50_A5JUU8 Cluster: Formin B; n=2; Trypanosoma brucei|Rep:
           Formin B - Trypanosoma brucei TREU927
          Length = 1004

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 23/70 (32%), Positives = 23/70 (32%)
 Frame = -3

Query: 592 PPPFXXFPPXFSPPPXXXXPGXKKXXAGXGXSXXRGGGXRPPLSQXPIXGEXGXPDXXXX 413
           PPP    PP   PPP    P       G       GG   PP    P  G  G P     
Sbjct: 492 PPPGGKLPPPPPPPPGGKLP-PPPPPPGKAPPPPPGGKLPPP----PPPGGKGAPPPPPP 546

Query: 412 PXGFXGPXXG 383
           P G  GP  G
Sbjct: 547 PPGKLGPGGG 556


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,049,470
Number of Sequences: 1657284
Number of extensions: 8188657
Number of successful extensions: 20081
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18252
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)