Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_C05
         (857 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   2.9  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    25   2.9  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   5.1  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/26 (38%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
 Frame = +1

Query: 58  QSLDIVDAIPL-FH-HSHYVSPMAEV 129
           + +D++D +PL +H H+H+ SPM+ +
Sbjct: 444 RGMDLMDDMPLPYHDHNHHNSPMSPI 469


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +3

Query: 651 YVCIKNQTIYLCNCAL-ISLND 713
           Y+C+ N T Y C C + I L D
Sbjct: 13  YICLLNPTSYSCACPIGIQLKD 34


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +1

Query: 61  SLDIVDAIPLFHHSHYVSPMAEVALTQIETIAQSENRVIAG 183
           +LD+ +  P+F+ S   S +  ++ T +  + Q+ N   +G
Sbjct: 588 NLDLANLDPVFNSSELRSVLGSLSTTDLNRLEQTANMQTSG 628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 853,993
Number of Sequences: 2352
Number of extensions: 16073
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)