Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_C03
         (968 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   2.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = -3

Query: 891 PPPPPXXRXGPAXXPXGXRAXXGXGXTRP 805
           P PPP    GP   P       G   +RP
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRP 611



 Score = 21.8 bits (44), Expect(2) = 2.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 926 GXPPPPPXXG 897
           G PPPPP  G
Sbjct: 529 GPPPPPPPGG 538



 Score = 21.4 bits (43), Expect(2) = 2.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 935 PRGGXPPPPP 906
           P G  PPPPP
Sbjct: 527 PLGPPPPPPP 536


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.144    0.478 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,870
Number of Sequences: 2352
Number of extensions: 4999
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105652443
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)