Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_C03
(968 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 38 0.011
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 38 0.011
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.014
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.014
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.014
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.13
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.13
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.13
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.53
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.53
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.53
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 32 0.71
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 32 0.71
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 32 0.71
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 32 0.71
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 32 0.71
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.2
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 26 1.3
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.6
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 29 5.0
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 24 9.1
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 25 9.5
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
P GG P P GG PP G PP P G G P G G P
Sbjct: 156 PLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP 208
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
P GG P P GG PP G PP P G G P G G P
Sbjct: 436 PLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP 488
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
PP G P PR G PPPPP P + P G P G G P
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPP----TGSLPPPQAGGSPPPAGTGSP 329
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXPXR 804
PP P G PPPPP G PP P PA G P R
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
PP P PR G PPPPP G PP P P G P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPT-GSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
PP G P P PPPP G PP P P G P
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = -1
Query: 953 GXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
G P G PPPPP G PP + P P G P
Sbjct: 227 GKRQAPPAGSPPPPPPPKG--SPPLAGSGSPPPPPAAGSPPPPRTGSP 272
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
PP G P PR G PPPPP P + P G P G G P
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPP----TGSLPPPQAGGSPPPAGTGSP 350
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXPXR 804
PP P G PPPPP G PP P PA G P R
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
PP P PR G PPPPP G PP P P G P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPT-GSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
PP G P P PPPP G PP P P G P
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = -1
Query: 953 GXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
G P G PPPPP G PP + P P G P
Sbjct: 248 GKRQAPPAGSPPPPPPPKG--SPPLAGSGSPPPPPAAGSPPPPRTGSP 293
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
PP G P PR G PPPPP P + P G P G G P
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPP----TGSLPPPQAGGSPPPAGTGSP 335
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXPXR 804
PP P G PPPPP G PP P PA G P R
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Score = 34.7 bits (76), Expect = 0.10
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
PP P PR G PPPPP G PP P P G P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPT-GSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
PP G P P PPPP G PP P P G P
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = -1
Query: 953 GXXPXXPRGGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXP 810
G P G PPPPP G PP + P P G P
Sbjct: 233 GKRQAPPAGSPPPPPPPKG--SPPLAGSGSPPPPPAAGSPPPPRTGSP 278
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -1
Query: 968 PPXXGGXXPXXP--RGGXPPPPPXXGXXXPP 882
PP G P P GG PPPPP G PP
Sbjct: 87 PPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP 117
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 968 PPXXGGXXPXXPR-GGXPPPPPXXGXXXPP 882
PP G P P GG PPPPP PP
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMFAGGIPP 96
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPP 906
PP GG P P G PPPPP
Sbjct: 98 PPMMGGIPPPPPMFGAPPPPP 118
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPP 882
PP GG P GG PPPPP G PP
Sbjct: 745 PPPPGGLPPI--SGGPPPPPPPPGGCPPP 771
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXP-----PPPPXXGXXXPPXRXXXTXXPXXXGXGXP 831
PP GG P P GG P PPPP PP P G P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPP 882
PP G P G PPPPP G PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -1
Query: 968 PPXXGGXXPXXPR-GGXPPPPP 906
PP GG P P GG PPPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPP 882
PP GG P GG PPPPP G PP
Sbjct: 745 PPPPGGLPPI--SGGPPPPPPPPGGCPPP 771
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXP-----PPPPXXGXXXPPXRXXXTXXPXXXGXGXP 831
PP GG P P GG P PPPP PP P G P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPP 882
PP G P G PPPPP G PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -1
Query: 968 PPXXGGXXPXXPR-GGXPPPPP 906
PP GG P P GG PPPPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPP 882
PP GG P GG PPPPP G PP
Sbjct: 328 PPPPGGLPPI--SGGPPPPPPPPGGCPPP 354
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXP-----PPPPXXGXXXPPXRXXXTXXPXXXGXGXP 831
PP GG P P GG P PPPP PP P G P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPPPXXGXXXPP 882
PP G P G PPPPP G PP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -1
Query: 968 PPXXGGXXPXXPR-GGXPPPPP 906
PP GG P P GG PPPPP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPP 356
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPP-PXXGXXXPP 882
PP GG P G PPPP P G PP
Sbjct: 219 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPP 248
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPP-PXXGXXXPP 882
PP GG P G PPPP P G PP
Sbjct: 205 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPP 234
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 968 PPXXGGXXPXXPRGGXPPPP-PXXGXXXPP 882
PP GG P G PPPP P G PP
Sbjct: 205 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPP 234
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 787 PPGXXXRXGXPXPXAGXPXPXXXGXXVSXXRXGGXXXPXXGGGGGXP-PRGXXG 945
PPG R G P P P G GG P G G P P+G G
Sbjct: 370 PPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKG 423
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 787 PPGXXXRXGXPXPXAGXPXPXXXGXXVSXXRXGGXXXPXXGGGGGXP-PRGXXG 945
PPG R G P P P G GG P G G P P+G G
Sbjct: 369 PPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKG 422
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 787 PPGXXXRXGXPXPXAGXPXPXXXGXXVSXXRXGGXXXPXXGGGGGXP-PRGXXG 945
PPG R G P P P G GG P G G P P+G G
Sbjct: 369 PPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKG 422
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 787 PPGXXXRXGXPXPXAGXPXPXXXGXXVSXXRXGGXXXPXXGGGGGXP-PRGXXG 945
PPG R G P P P G GG P G G P P+G G
Sbjct: 370 PPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKG 423
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 787 PPGXXXRXGXPXPXAGXPXPXXXGXXVSXXRXGGXXXPXXGGGGGXP-PRGXXG 945
PPG R G P P P G GG P G G P P+G G
Sbjct: 406 PPGLPGRPGNPGPPGTDGYPGAPGPAGPIGNTGGPGLPGYPGNEGLPGPKGDKG 459
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = -1
Query: 968 PPXXGGXXPXXPR--GGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXPXRXW 798
PP P PR GG PPPPP PP G PA G W
Sbjct: 772 PPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPGNLLMNGINRGDISPAANKGVLKLHW 830
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = -1
Query: 968 PPXXGGXXPXXPR--GGXPPPPPXXGXXXPPXRXXXTXXPXXXGXGXPAXGXGXPXRXW 798
PP P PR GG PPPPP PP G PA G W
Sbjct: 772 PPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPGNLLMNGINRGDISPAANKGVLKLHW 830
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.8 bits (54), Expect(2) = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 447 PAPXXXPPPPPP 412
P+P PPPPPP
Sbjct: 1336 PSPPPPPPPPPP 1347
Score = 22.6 bits (46), Expect(3) = 1.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 441 PXXXPPPPPP 412
P PPPPPP
Sbjct: 1354 PVPPPPPPPP 1363
Score = 22.6 bits (46), Expect(3) = 1.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 429 PPPPPPXXTE 400
PPPPPP +E
Sbjct: 1390 PPPPPPLPSE 1399
Score = 22.2 bits (45), Expect(3) = 1.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 447 PAPXXXPPPPP 415
P P PPPPP
Sbjct: 1338 PPPPPPPPPPP 1348
Score = 22.2 bits (45), Expect(2) = 3.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 429 PPPPPPXXT 403
PPPPPP T
Sbjct: 1356 PPPPPPPPT 1364
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 965 PXXGGXXPXXPRGGXPPPPP-XXGXXXPPXRXXXTXXPXXXGXGXP 831
P G P PRG PPPPP G PP P G G P
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPP---PFMPPPPHFGMGPP 332
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 965 PXXGGXXPXXPRGGXPPPPP-XXGXXXPPXRXXXTXXPXXXGXGXP 831
P G P PRG PPPPP G PP P G G P
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPP---PFMPPPPHFGMGPP 332
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 883 GGXXXPXXGGGGGXPPRGXXGXXPPXWG 966
GG GGGGG PPRG P G
Sbjct: 8 GGPMYGGAGGGGGGPPRGPPQQPPQPQG 35
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 24.2 bits (50), Expect(2) = 9.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 444 APXXXPPPPPP 412
AP PPPPPP
Sbjct: 83 APPPPPPPPPP 93
Score = 22.2 bits (45), Expect(2) = 9.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 429 PPPPPPXXT 403
PPPPPP T
Sbjct: 86 PPPPPPPPT 94
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 25.0 bits (52), Expect(2) = 9.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 447 PAPXXXPPPPPP 412
P P PPPPPP
Sbjct: 302 PQPHPKPPPPPP 313
Score = 21.4 bits (43), Expect(2) = 9.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 429 PPPPPPXXTE 400
PPPPPP E
Sbjct: 309 PPPPPPPIHE 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.144 0.478
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,247,457
Number of Sequences: 27780
Number of extensions: 174053
Number of successful extensions: 2055
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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