Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_B24
         (885 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1SVJ6 Cluster: Putative uncharacterized protein; n=1; ...    35   3.2  
UniRef50_Q4D3R0 Cluster: Mucin-associated surface protein (MASP)...    35   3.2  
UniRef50_UPI000023D52B Cluster: hypothetical protein FG00976.1; ...    34   4.2  
UniRef50_Q9P7Y4 Cluster: Mediator of RNA polymerase II transcrip...    33   7.3  
UniRef50_Q9VCU3 Cluster: CG4725-PA; n=3; Sophophora|Rep: CG4725-...    33   9.7  
UniRef50_A2Q895 Cluster: Contig An01c0110, complete genome; n=1;...    33   9.7  

>UniRef50_A1SVJ6 Cluster: Putative uncharacterized protein; n=1;
           Psychromonas ingrahamii 37|Rep: Putative uncharacterized
           protein - Psychromonas ingrahamii (strain 37)
          Length = 97

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 20/47 (42%), Positives = 25/47 (53%)
 Frame = -3

Query: 532 VLHLSFTVACTIVFGGAFYVFFSWMLFYWLTICQCVHIERHSVRQLI 392
           +L +  T A T V G  F++F  + LF W TICQ  H   H V  LI
Sbjct: 2   LLEIQSTHAMTAVIGILFFLFALFDLFDWTTICQRFHF--HPVAVLI 46


>UniRef50_Q4D3R0 Cluster: Mucin-associated surface protein (MASP),
           putative; n=16; Trypanosoma cruzi|Rep: Mucin-associated
           surface protein (MASP), putative - Trypanosoma cruzi
          Length = 367

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +2

Query: 407 TVPFNVDALTNGQPIEQHPTEKDVEGPTENNSTSDSEA 520
           TV    DA T G P   HP +   EG T+  + SD EA
Sbjct: 267 TVALRSDAGTEGTPPTNHPNQPSTEGATQPETNSDGEA 304


>UniRef50_UPI000023D52B Cluster: hypothetical protein FG00976.1; n=1;
            Gibberella zeae PH-1|Rep: hypothetical protein FG00976.1
            - Gibberella zeae PH-1
          Length = 1107

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +2

Query: 470  KDVEGPTENNSTSDSEAEMQYLFNRSKITASGNPRVNTFRILAELKLANDLVAII--RFT 643
            K V  P + NS  + +   + +  R ++ AS +P +N+  +    KL ND    I  R T
Sbjct: 782  KSVSKPDKFNSLLNGQLAQEGVMERERMLASDDPEMNSQTLAGNTKLGNDQHPSIRARST 841

Query: 644  KDVVP*PQAPHCGA 685
            KD  P  +A   GA
Sbjct: 842  KDAKPEAEAILDGA 855


>UniRef50_Q9P7Y4 Cluster: Mediator of RNA polymerase II
           transcription subunit 14; n=3; Schizosaccharomyces
           pombe|Rep: Mediator of RNA polymerase II transcription
           subunit 14 - Schizosaccharomyces pombe (Fission yeast)
          Length = 879

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
 Frame = +2

Query: 305 SKLYLVEYQHLLERQDIKVRHVLALYLR----SYELTNTVPFNVDALTNGQPIEQHPTEK 472
           SKLY++    L  +Q ++  H L + +R     YE+  T PF    + NG+     P E 
Sbjct: 139 SKLYMLSESPLSTKQILQTLHALNMLIRIRLSLYEIIPT-PFQHFTIANGRCTFTVPNEF 197

Query: 473 DVEGPTENNSTSDSEAEMQYL---FNRSKITASGNPRVNTFRILAELKLANDLVAIIRFT 643
            V   T +     +    Q++   F       S  P    +R+  EL L  ++ A     
Sbjct: 198 SVSLTTNSQDPKSTGISFQWIVVDFQFHLPDFSSTPA--KYRVFIELHLNEEIAAAFVLQ 255

Query: 644 KDVVP 658
           K ++P
Sbjct: 256 KPILP 260


>UniRef50_Q9VCU3 Cluster: CG4725-PA; n=3; Sophophora|Rep: CG4725-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 741

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 15/83 (18%)
 Frame = +2

Query: 299 SGSKLYLVEYQHLLERQDIKVRHVLALY-LRSYELTNTVPF-------------NVDALT 436
           SG  L    Y   LE+QD K+R +LA   L     TNT  F             N DA+ 
Sbjct: 636 SGLNLAFNAYLAWLEQQDHKLRPLLAKETLSELNFTNTQLFFIYFAQTRCWAKDNQDAIL 695

Query: 437 NGQPIEQHPTEK-DVEGPTENNS 502
           +  P+ QH  E+ DV GP  N++
Sbjct: 696 DSMPLMQHTPERWDVNGPLSNSA 718


>UniRef50_A2Q895 Cluster: Contig An01c0110, complete genome; n=1;
           Aspergillus niger|Rep: Contig An01c0110, complete genome
           - Aspergillus niger
          Length = 871

 Score = 33.1 bits (72), Expect = 9.7
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 362 RHVLALYLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPTENNSTS 508
           +H L +  ++  +TNT P   +  T+ QP +  P   + E  T+ NS S
Sbjct: 723 KHTLPIETQTSTITNTYPGTQNLTTDTQPSDSLPRPDETENQTQTNSQS 771


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,471,714
Number of Sequences: 1657284
Number of extensions: 14205715
Number of successful extensions: 36621
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36593
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)