Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_B24
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67995-2|CAA91944.2|  458|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U61946-5|AAC24389.1|  391|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AF025457-3|AAB70963.2|  248|Caenorhabditis elegans Hypothetical ...    30   2.5  
U00033-10|AAC48299.1|  143|Caenorhabditis elegans Hypothetical p...    29   4.4  
AC024843-8|AAM48560.1|  726|Caenorhabditis elegans Hypothetical ...    29   4.4  
AC024843-7|AAF60843.2|  743|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr...    29   5.8  
U28941-8|AAC71105.2|  470|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>Z67995-2|CAA91944.2|  458|Caenorhabditis elegans Hypothetical
           protein M153.2 protein.
          Length = 458

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 559 IWQSEGKYLSNTCRTETSKRSS 624
           IW  +G YLS  C  ET+ R+S
Sbjct: 117 IWTGQGSYLSQNCTKETTSRNS 138


>U61946-5|AAC24389.1|  391|Caenorhabditis elegans Hypothetical
           protein F47C12.2 protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
 Frame = +1

Query: 571 EGKYL--SNTCRTETSKRSSGHNPFHERRRALTASTPLRGRSHEXLKNLRNQIYXTEYPQ 744
           +G Y   S +C +E SK+ +GHN   +        +  +       K    Q+  T YP 
Sbjct: 185 QGSYFCSSGSCISE-SKKCNGHNDCDDGSDEQNCPSAFQPNCRTYEKGESGQLSSTNYPN 243

Query: 745 QYTPXXRVENVL 780
            Y P     +VL
Sbjct: 244 SYDPNLNCRHVL 255


>AF025457-3|AAB70963.2|  248|Caenorhabditis elegans Hypothetical
           protein C08E3.5 protein.
          Length = 248

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 127 KRLWILLEWITENYAYPAYCVVNVEKLSYH-RTEISPGKEILV 252
           + + +L+ W+T NY+   +CV  V  + YH R E   G  ++V
Sbjct: 47  RNMKVLINWLTLNYSEKLHCVSIVYNMRYHIRYEQKDGGCVVV 89


>U00033-10|AAC48299.1|  143|Caenorhabditis elegans Hypothetical
           protein F37C12.14 protein.
          Length = 143

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 404 NTVPFNVDALTNGQPIEQHPTEKDVEGPTENNSTSDSEAE-MQYLFNRSKITASGNPRV 577
           NT   N+  LT  QP+     EK +E   EN+S  D + E  +Y F   K   S  P++
Sbjct: 80  NTFYSNIIQLTEDQPMHLLEPEKPMEIEVENSSHLDFKRENSEYDFKVEKADYSDMPQL 138


>AC024843-8|AAM48560.1|  726|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.3c protein.
          Length = 726

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +2

Query: 335 LLERQDIKVRHVLA-LYLRSYELTNTVPFNVDALTNGQPI--EQHPTEKDVEGPTENNST 505
           +++R    +R V+A +Y +  E +  VP  ++   N QP    Q+P + D+  P+E  S 
Sbjct: 360 IIDRFKFLLRMVVADVYYQGTESSMAVPKALETGYNTQPYPPNQYPLDTDIRRPSERPSN 419

Query: 506 SDSEAE 523
             S  E
Sbjct: 420 GPSAEE 425


>AC024843-7|AAF60843.2|  743|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.3a protein.
          Length = 743

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +2

Query: 335 LLERQDIKVRHVLA-LYLRSYELTNTVPFNVDALTNGQPI--EQHPTEKDVEGPTENNST 505
           +++R    +R V+A +Y +  E +  VP  ++   N QP    Q+P + D+  P+E  S 
Sbjct: 360 IIDRFKFLLRMVVADVYYQGTESSMAVPKALETGYNTQPYPPNQYPLDTDIRRPSERPSN 419

Query: 506 SDSEAE 523
             S  E
Sbjct: 420 GPSAEE 425


>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical protein
            C11E4.6 protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 461  PTEKDVEGPTENNSTSDSEAEMQYLFNRSKITASGNPRVNTFRILAEL-KLANDLVAIIR 637
            P   D  G        D   +++ + NRS +T  G   V  F+I++E+ KL +D+ +  R
Sbjct: 848  PVAADSVGALLQTHGYDRMDQLKGIINRSILTEIGVDDVTKFKIMSEIEKLKDDVASAGR 907

Query: 638  F 640
            F
Sbjct: 908  F 908


>U28941-8|AAC71105.2|  470|Caenorhabditis elegans Hypothetical
           protein F31D5.2 protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 559 IWQSEGKYLSNTCRTETSKRSS 624
           +W  +GKYL+  C +ET +R++
Sbjct: 118 LWVGQGKYLTENCTSETIERNT 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,770,822
Number of Sequences: 27780
Number of extensions: 351986
Number of successful extensions: 961
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)