Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_B23
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.34 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   1.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   1.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   4.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = -1

Query: 392  GMNVPSRSFKVATSFTLPFSLASFSSAILVLYCSSVRSPVSRFCLP 255
            G   PS+   V+ S ++P  +ASF       Y   V  P     LP
Sbjct: 1289 GEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLP 1334


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 90  RKSKILDIFLIFVLEIFSKIKQNEDNLVHIVLLRVQE 200
           R+ K +D+F+IF L    K++  +++ V   + ++QE
Sbjct: 223 RQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQE 259


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 90  RKSKILDIFLIFVLEIFSKIKQNEDNLVHIVLLRVQE 200
           R+ K +D+F+IF L    K++  +++ V   + ++QE
Sbjct: 179 RQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQE 215


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 582 THNEKLVSPHGAVVNLVLDRFSY 514
           T+N  LV+P+G  V  ++D  SY
Sbjct: 511 TYNRHLVAPNGDHVISLIDEISY 533


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 197 LNTKKHNMNQIIFILFDFTKDFQ 129
           L +    MNQ ++   DF ++FQ
Sbjct: 609 LTSNVFRMNQFVYDAIDFLREFQ 631


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 600 PSHRSGGDGLQDFTGR 647
           P H   GDG+ DF+ R
Sbjct: 196 PMHSPPGDGILDFSKR 211



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 667  SKTPSPGLPVKSCRPSPPDRCDGMYST 587
            S + S G+P+K     PP    G  ST
Sbjct: 1097 SSSSSEGVPLKGTAVPPPSGSSGPGST 1123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,515
Number of Sequences: 336
Number of extensions: 3737
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)