Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_B22
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 55 6e-08
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 55 6e-08
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 50 2e-06
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 50 3e-06
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 50 3e-06
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 50 3e-06
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 48 7e-06
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 36 0.038
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 31 0.82
AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 55.2 bits (127), Expect = 6e-08
Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Frame = +1
Query: 196 VLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXX 372
VLD+R K G E+ ++W+G+ + D++WEP +NL C +++
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQ 83
Query: 373 XXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTD 552
D G + + I+G T GEL FL K+ D
Sbjct: 84 KPEPSEDQADPEEDKDEKKETNQNDKFSL---EGKQLKCIVGLTKGPGELHFLCKF-SDD 139
Query: 553 EADLVPAKQANVRCPQVVIHF 615
A L+PAK+ N R P VI +
Sbjct: 140 TARLLPAKEVNSRYPSQVIRY 160
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 484 EKIIGA-TDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIHF 615
EK++ T +G FL++WQG E+D + N++C +++ F
Sbjct: 22 EKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 55.2 bits (127), Expect = 6e-08
Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 1/141 (0%)
Frame = +1
Query: 196 VLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXX 372
VLD+R K G E+ ++W+G+ + D++WEP +NL C +++
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQ 83
Query: 373 XXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTD 552
D G + + I+G T GEL FL K+ D
Sbjct: 84 KPEPSEDQADPEEDKDEKKETNQNDKFSL---EGKQLKCIVGLTKGPGELHFLCKF-SDD 139
Query: 553 EADLVPAKQANVRCPQVVIHF 615
A L+PAK+ N R P VI +
Sbjct: 140 TARLLPAKEVNSRYPSQVIRY 160
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 484 EKIIGA-TDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIHF 615
EK++ T +G FL++WQG E+D + N++C +++ F
Sbjct: 22 EKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 50.4 bits (115), Expect = 2e-06
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +1
Query: 196 VLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQ 315
VL++R+ G EYY+KW+G+ + + +WEP +NL C +IQ
Sbjct: 42 VLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQ 81
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 490 IIGATDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIHF 615
IIG T + GEL FL K+ D L+P ++ANVR P VI F
Sbjct: 125 IIGITKAPGELHFLCKFSD-DSVHLIPLREANVRFPSQVIKF 165
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 50.4 bits (115), Expect = 2e-06
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +1
Query: 196 VLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQ 315
VL++R+ G EYY+KW+G+ + + +WEP +NL C +IQ
Sbjct: 42 VLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQ 81
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 490 IIGATDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIHF 615
IIG T + GEL FL K+ D L+P ++ANVR P VI F
Sbjct: 125 IIGITKAPGELHFLCKFSD-DSVHLIPLREANVRFPSQVIKF 165
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 1/133 (0%)
Frame = +1
Query: 196 VLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXX 372
VLD+R K G E+ ++W+G+ + D++WEP +NL C +++
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQ 83
Query: 373 XXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTD 552
D G + + I+G T GEL FL K+ D
Sbjct: 84 KPEPSEDQADPEEDKDEKKETNQNDKFSL---EGKQLKCIVGLTKGPGELHFLCKF-SDD 139
Query: 553 EADLVPAKQANVR 591
A L+PAK+ N R
Sbjct: 140 TARLLPAKEVNSR 152
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 484 EKIIGA-TDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIHF 615
EK++ T +G FL++WQG E+D + N++C +++ F
Sbjct: 22 EKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 1/133 (0%)
Frame = +1
Query: 196 VLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXX 372
VLD+R K G E+ ++W+G+ + D++WEP +NL C +++
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQ 83
Query: 373 XXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTD 552
D G + + I+G T GEL FL K+ D
Sbjct: 84 KPEPSEDQADPEEDKDEKKETNQNDKFSL---EGKQLKCIVGLTKGPGELHFLCKF-SDD 139
Query: 553 EADLVPAKQANVR 591
A L+PAK+ N R
Sbjct: 140 TARLLPAKEVNSR 152
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 484 EKIIGA-TDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIHF 615
EK++ T +G FL++WQG E+D + N++C +++ F
Sbjct: 22 EKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 1/133 (0%)
Frame = +1
Query: 196 VLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXX 372
VLD+R K G E+ ++W+G+ + D++WEP +NL C +++
Sbjct: 24 VLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEFEREFSKREKPIRKRHSQ 83
Query: 373 XXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTD 552
D G + + I+G T GEL FL K+ D
Sbjct: 84 KPEPSEDQADPEEDKDEKKETNQNDKFSL---EGKQLKCIVGLTKGPGELHFLCKF-SDD 139
Query: 553 EADLVPAKQANVR 591
A L+PAK+ N R
Sbjct: 140 TARLLPAKEVNSR 152
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 484 EKIIGA-TDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIHF 615
EK++ T +G FL++WQG E+D + N++C +++ F
Sbjct: 22 EKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 48.4 bits (110), Expect = 7e-06
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +1
Query: 196 VLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQ 315
+L+ R K G E+Y+KW GY N+WEP++N+ P LI+
Sbjct: 13 ILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIE 52
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 202 DRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLD-CPDL 309
D+R ++ Y + W+GY ++ TWEPE+NL+ C +L
Sbjct: 42 DKR-RHSKYAYLVHWRGYDWKERTWEPEENLENCEEL 77
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 35.9 bits (79), Expect = 0.038
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 196 VLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 294
+L ++ + +L ++W GY +++TWEPE++L
Sbjct: 29 ILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDL 61
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 232 YYLKWKGYSDEDNTWEPEDNLDCPDLI 312
+ +KW GY +++ TWEPE N+ PD +
Sbjct: 95 FLVKWLGYGNKEMTWEPESNI--PDSV 119
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 31.5 bits (68), Expect = 0.82
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 229 EYYLKWKGYSDEDNTWEPEDNL 294
++++KW G+S NTWE E++L
Sbjct: 238 QFFVKWTGWSHLHNTWESENSL 259
>AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical
protein Y39C12A.7 protein.
Length = 324
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 312 YKIWTIKIILWFPCIIFITVSFPFQVIFQNTILNAPVQNFFNRK 181
+ I+ I II C F T +PF V+F + I++ + N N K
Sbjct: 123 FLIYLISIISVLVCTQFSTTFYPFLVLFMSNIISY-IVNIINYK 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,776,493
Number of Sequences: 27780
Number of extensions: 243782
Number of successful extensions: 710
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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