Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_B18
(918 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019272-1|AAH19272.1| 142|Homo sapiens thioredoxin-like 4A pro... 148 3e-35
BC001046-1|AAH01046.1| 142|Homo sapiens thioredoxin-like 4A pro... 148 3e-35
AF146373-1|AAF17332.1| 142|Homo sapiens thioredoxin-like U5 snR... 148 3e-35
AF023612-1|AAB81951.1| 91|Homo sapiens Dim1p homolog protein. 148 3e-35
AF023611-1|AAB81950.1| 142|Homo sapiens Dim1p homolog protein. 148 3e-35
CR457240-1|CAG33521.1| 149|Homo sapiens FLJ20511 protein. 63 2e-09
BC009646-1|AAH09646.1| 149|Homo sapiens thioredoxin-like 4B pro... 63 2e-09
AY566808-1|AAS68520.1| 149|Homo sapiens Dim1-like protein protein. 63 2e-09
AK000518-1|BAA91224.1| 149|Homo sapiens protein ( Homo sapiens ... 63 2e-09
AK222889-1|BAD96609.1| 149|Homo sapiens thioredoxin-like 4B var... 61 6e-09
AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy c... 31 5.9
>BC019272-1|AAH19272.1| 142|Homo sapiens thioredoxin-like 4A
protein.
Length = 142
Score = 148 bits (358), Expect = 3e-35
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +3
Query: 480 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 659
MSYML HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
Query: 660 VDITEVPDLIK 692
VDITEVPD K
Sbjct: 61 VDITEVPDFNK 71
Score = 31.1 bits (67), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 683 FNKMYELYDPC 715
FNKMYELYDPC
Sbjct: 69 FNKMYELYDPC 79
>BC001046-1|AAH01046.1| 142|Homo sapiens thioredoxin-like 4A
protein.
Length = 142
Score = 148 bits (358), Expect = 3e-35
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +3
Query: 480 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 659
MSYML HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
Query: 660 VDITEVPDLIK 692
VDITEVPD K
Sbjct: 61 VDITEVPDFNK 71
Score = 31.1 bits (67), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 683 FNKMYELYDPC 715
FNKMYELYDPC
Sbjct: 69 FNKMYELYDPC 79
>AF146373-1|AAF17332.1| 142|Homo sapiens thioredoxin-like U5 snRNP
protein U5-15kD protein.
Length = 142
Score = 148 bits (358), Expect = 3e-35
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +3
Query: 480 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 659
MSYML HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
Query: 660 VDITEVPDLIK 692
VDITEVPD K
Sbjct: 61 VDITEVPDFNK 71
Score = 31.1 bits (67), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 683 FNKMYELYDPC 715
FNKMYELYDPC
Sbjct: 69 FNKMYELYDPC 79
>AF023612-1|AAB81951.1| 91|Homo sapiens Dim1p homolog protein.
Length = 91
Score = 148 bits (358), Expect = 3e-35
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +3
Query: 480 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 659
MSYML HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
Query: 660 VDITEVPDLIK 692
VDITEVPD K
Sbjct: 61 VDITEVPDFNK 71
Score = 31.1 bits (67), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 683 FNKMYELYDPC 715
FNKMYELYDPC
Sbjct: 69 FNKMYELYDPC 79
>AF023611-1|AAB81950.1| 142|Homo sapiens Dim1p homolog protein.
Length = 142
Score = 148 bits (358), Expect = 3e-35
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +3
Query: 480 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 659
MSYML HLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
Query: 660 VDITEVPDLIK 692
VDITEVPD K
Sbjct: 61 VDITEVPDFNK 71
Score = 31.1 bits (67), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 683 FNKMYELYDPC 715
FNKMYELYDPC
Sbjct: 69 FNKMYELYDPC 79
>CR457240-1|CAG33521.1| 149|Homo sapiens FLJ20511 protein.
Length = 149
Score = 62.9 bits (146), Expect = 2e-09
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +3
Query: 480 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 659
MS++L L + +VDQAI S ++V+V+RFG D DP C+++D++L + + A IYL
Sbjct: 1 MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60
Query: 660 VDITE 674
VD+ +
Sbjct: 61 VDVDQ 65
>BC009646-1|AAH09646.1| 149|Homo sapiens thioredoxin-like 4B
protein.
Length = 149
Score = 62.9 bits (146), Expect = 2e-09
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +3
Query: 480 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 659
MS++L L + +VDQAI S ++V+V+RFG D DP C+++D++L + + A IYL
Sbjct: 1 MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60
Query: 660 VDITE 674
VD+ +
Sbjct: 61 VDVDQ 65
>AY566808-1|AAS68520.1| 149|Homo sapiens Dim1-like protein protein.
Length = 149
Score = 62.9 bits (146), Expect = 2e-09
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +3
Query: 480 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 659
MS++L L + +VDQAI S ++V+V+RFG D DP C+++D++L + + A IYL
Sbjct: 1 MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60
Query: 660 VDITE 674
VD+ +
Sbjct: 61 VDVDQ 65
>AK000518-1|BAA91224.1| 149|Homo sapiens protein ( Homo sapiens
cDNA FLJ20511 fis, clone KAT09708. ).
Length = 149
Score = 62.9 bits (146), Expect = 2e-09
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +3
Query: 480 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 659
MS++L L + +VDQAI S ++V+V+RFG D DP C+++D++L + + A IYL
Sbjct: 1 MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60
Query: 660 VDITE 674
VD+ +
Sbjct: 61 VDVDQ 65
>AK222889-1|BAD96609.1| 149|Homo sapiens thioredoxin-like 4B
variant protein.
Length = 149
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/65 (40%), Positives = 44/65 (67%)
Frame = +3
Query: 480 MSYMLGHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 659
MS++L L + +VDQAI S ++V+V+RFG D DP C+++D++L + + A I+L
Sbjct: 1 MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIHL 60
Query: 660 VDITE 674
VD+ +
Sbjct: 61 VDVDQ 65
>AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy chain
DNAH5 protein.
Length = 4624
Score = 31.1 bits (67), Expect = 5.9
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -3
Query: 280 LVTVHVFYRSVFKKLCLLRLTSDFRVV*SRRCLFCYF--ITKRMFCEIENFKFXXXX*YV 107
L+T+HV R +F LC + + S ++C F YF + +M I + F ++
Sbjct: 1889 LITIHVHQRDIFDDLCHMHIKSPMDFEWLKQCRF-YFNEDSDKMMIHITDVAFIYQNEFL 1947
Query: 106 GIT 98
G T
Sbjct: 1948 GCT 1950
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,188,057
Number of Sequences: 237096
Number of extensions: 2000749
Number of successful extensions: 2701
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2701
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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