Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_B14
         (892 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    24   1.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   4.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   4.3  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   7.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +3

Query: 543 LAPRDIPDVNPNLVEMLEEDGITLENDSDSENLEKFTYGFANKICNEFCSIGNEFPQIFE 722
           ++P D  D  PN  ++  EDG    N     N++K   G+   +C     IG+    + +
Sbjct: 738 VSPGDYKDFKPNNPDIKVEDGTLTIN-----NIQKTNEGY--YLCEAVNGIGSGLSAVIQ 790

Query: 723 L--KAPENVAVDERN 761
           +  +AP    +  RN
Sbjct: 791 ISVQAPPQFDIKLRN 805


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 727  FNSKICGNSFPMLQN 683
            F+++ CG SFP+L++
Sbjct: 972  FSNRCCGGSFPLLRS 986


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = -1

Query: 781 SCFILIELRSSTATFSGAFNSKICGNSFPM---LQNSLHILLAKP 656
           SC   +++   T T    F  KICG +F     L+  + +  AKP
Sbjct: 145 SCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKP 189


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 219 LFNIKTDCDAVKQWTDSQKSNKFVTSVPWT*Y 124
           LF++ +D   +  W D++ +NK    + W  Y
Sbjct: 365 LFHLGSDEVNLTCWQDTKSANKIAMKLFWAQY 396


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/40 (25%), Positives = 16/40 (40%)
 Frame = -3

Query: 383 HKKEIFTINIYFCISNVCIRCVNCYEYVVVVLR*FKTWSK 264
           H+ EI    +        + C N Y  VV      +TW++
Sbjct: 57  HRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYKRRTWTR 96


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 780 HVSSS*NYVRPQQH 739
           H+  S NY++PQ H
Sbjct: 181 HLRDSPNYIKPQLH 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,614
Number of Sequences: 336
Number of extensions: 4433
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)