Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_B10
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7Z2E3 Cluster: Aprataxin; n=44; Euteleostomi|Rep: Apra... 93 6e-18
UniRef50_UPI00015B4C59 Cluster: PREDICTED: similar to polynucleo... 81 3e-14
UniRef50_Q9VHS0 Cluster: CG9601-PA; n=3; Sophophora|Rep: CG9601-... 80 8e-14
UniRef50_P61802 Cluster: Aprataxin; n=1; Ciona intestinalis|Rep:... 79 1e-13
UniRef50_UPI000155CE00 Cluster: PREDICTED: similar to aprataxin;... 79 2e-13
UniRef50_UPI0000D568F1 Cluster: PREDICTED: similar to CG9601-PA;... 77 6e-13
UniRef50_Q7Q000 Cluster: ENSANGP00000009138; n=2; Culicidae|Rep:... 76 1e-12
UniRef50_P61799 Cluster: Aprataxin; n=21; Deuterostomia|Rep: Apr... 74 6e-12
UniRef50_Q08BP0 Cluster: Zgc:153084; n=6; Eumetazoa|Rep: Zgc:153... 58 3e-07
UniRef50_Q96T60 Cluster: Bifunctional polynucleotide phosphatase... 52 1e-05
UniRef50_Q05FM2 Cluster: Lysyl-tRNA synthetase; n=1; Candidatus ... 34 5.5
UniRef50_Q54B72 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q3VMC6 Cluster: VCBS precursor; n=1; Pelodictyon phaeoc... 33 7.3
UniRef50_Q0E6C9 Cluster: FiwA protein; n=4; root|Rep: FiwA prote... 33 7.3
UniRef50_Q6MCD6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_Q4UFU6 Cluster: Putative uncharacterized protein; n=2; ... 33 9.6
>UniRef50_Q7Z2E3 Cluster: Aprataxin; n=44; Euteleostomi|Rep:
Aprataxin - Homo sapiens (Human)
Length = 356
Score = 93.5 bits (222), Expect = 6e-18
Identities = 43/124 (34%), Positives = 74/124 (59%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKL 624
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSG 133
Query: 625 EDDS 636
DS
Sbjct: 134 NSDS 137
>UniRef50_UPI00015B4C59 Cluster: PREDICTED: similar to
polynucleotide kinase- 3-phosphatase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to polynucleotide
kinase- 3-phosphatase - Nasonia vitripennis
Length = 549
Score = 81.4 bits (192), Expect = 3e-14
Identities = 42/125 (33%), Positives = 69/125 (55%)
Frame = +1
Query: 271 SRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQL 450
++ C++ + P+ LP +++ VGR+ +TKI D CSR+Q+ L A E V ++QL
Sbjct: 5 TKSCYICSENKSMPPVYLPDKLEVFVGRSVDTKIADPHCSRKQVRLYASYEDHKVSVEQL 64
Query: 451 GVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLED 630
G A GL+GF ++ HG +EIL H + +EF+P P+ + T + KR L
Sbjct: 65 GSRACGLNGFKTERGVRLVAQHGDRLEILYGKHPYKIEFNPAPK-VNTESEKPKKRLLSQ 123
Query: 631 DSTSQ 645
+S +
Sbjct: 124 ESEEE 128
>UniRef50_Q9VHS0 Cluster: CG9601-PA; n=3; Sophophora|Rep: CG9601-PA
- Drosophila melanogaster (Fruit fly)
Length = 523
Score = 79.8 bits (188), Expect = 8e-14
Identities = 39/106 (36%), Positives = 62/106 (58%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+ +R+C L+ H I L + VGR++ET I+D CS++Q+ L+ D +K V +K
Sbjct: 18 VAARICTLKPTEPEHHSIHLTAG-ENFVGRSRETGIRDSKCSKRQIQLQVDLKKAVVSLK 76
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPE 582
LGVN G++G L ++ E+ HG +EI+ H + F+PPPE
Sbjct: 77 VLGVNPCGVNGLMLMQNGERELKHGDLVEIVYGRHQFEVVFNPPPE 122
>UniRef50_P61802 Cluster: Aprataxin; n=1; Ciona intestinalis|Rep:
Aprataxin - Ciona intestinalis (Transparent sea squirt)
Length = 380
Score = 79.4 bits (187), Expect = 1e-13
Identities = 34/96 (35%), Positives = 56/96 (58%)
Frame = +1
Query: 280 CFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVN 459
C+L C +H + LPHNV +I+GR E I D+ CSR QL L ++C K +V +K+LG N
Sbjct: 17 CYLECCKSSHPKLPLPHNVPVIIGRTPELGITDKLCSRSQLELTSNCYKRYVLVKRLGAN 76
Query: 460 ASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEF 567
S ++G ++K++ + G + ++ H + F
Sbjct: 77 TSQINGIDIEKNKSSRLEEGQDLHVVNGKFPHRVYF 112
>UniRef50_UPI000155CE00 Cluster: PREDICTED: similar to aprataxin;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
aprataxin - Ornithorhynchus anatinus
Length = 408
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/98 (36%), Positives = 64/98 (65%)
Frame = +1
Query: 274 RLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLG 453
R C+L D + I+LPH +++GR+ ET+I D+ CSRQQ+ LKA+CEK +V++KQ+G
Sbjct: 2 RECWLVRQDDPNQRIRLPHLETVVLGRSPETQITDKKCSRQQVYLKAECEKGYVKVKQMG 61
Query: 454 VNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEF 567
VN S +D + ++ ++ G T+ ++ + + ++F
Sbjct: 62 VNPSSVDSAVIGRNRELKMKPGQTLRMVNGLYPYSVQF 99
>UniRef50_UPI0000D568F1 Cluster: PREDICTED: similar to CG9601-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9601-PA - Tribolium castaneum
Length = 522
Score = 77.0 bits (181), Expect = 6e-13
Identities = 40/114 (35%), Positives = 58/114 (50%)
Frame = +1
Query: 271 SRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQL 450
S + F C+ + I LPH +I+GRN+ET I D SR L AD + V +K L
Sbjct: 20 SSVLFAGCVKNAQKRITLPHQKPVIIGRNEETGITDLHVSRNHLECTADLDTSKVLVKTL 79
Query: 451 GVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTF 612
G + SG +G+AL ++E Y + HG IE+ L H + F+ E + F
Sbjct: 80 GKSYSGCNGYALMQNETYTLKHGDRIEVRLGFHEFDIIFESQDEPVVKKPRLDF 133
>UniRef50_Q7Q000 Cluster: ENSANGP00000009138; n=2; Culicidae|Rep:
ENSANGP00000009138 - Anopheles gambiae str. PEST
Length = 524
Score = 75.8 bits (178), Expect = 1e-12
Identities = 41/123 (33%), Positives = 76/123 (61%)
Frame = +1
Query: 280 CFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVN 459
C ++ L + PI++ + Q +VGR+ ET+I+D+ CSR+Q+ LKA+ E+ +V +K LG+N
Sbjct: 21 CVIKPLSPEYLPIRI-NTEQTMVGRSPETQIQDELCSRKQVCLKANLEQGYVLVKSLGLN 79
Query: 460 ASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLEDDST 639
S L+G LK++ YE HG +E++ + ++ +F P +TS+ + + + S+
Sbjct: 80 PSVLNGKELKRNIGYEAVHGDILELVPGMYKYVFDFIYEP---STSEEEKGPQTSKKSSS 136
Query: 640 SQR 648
+ R
Sbjct: 137 ASR 139
>UniRef50_P61799 Cluster: Aprataxin; n=21; Deuterostomia|Rep:
Aprataxin - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 324
Score = 73.7 bits (173), Expect = 6e-12
Identities = 34/97 (35%), Positives = 58/97 (59%)
Frame = +1
Query: 277 LCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGV 456
+C L ++H PI+L H + +GR +TKIKD+ CSR+Q+ L+ADC + V +KQLGV
Sbjct: 3 VCLLVSEDNSHKPIELHHQQSVTLGRGPDTKIKDKKCSREQVELRADCNRGFVTVKQLGV 62
Query: 457 NASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEF 567
N + +D + K I G ++ ++ + + ++F
Sbjct: 63 NPTLVDDVVVGKGNQVSIKPGQSLYMVNQQYPYSVKF 99
>UniRef50_Q08BP0 Cluster: Zgc:153084; n=6; Eumetazoa|Rep: Zgc:153084
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 586
Score = 58.0 bits (134), Expect = 3e-07
Identities = 38/114 (33%), Positives = 59/114 (51%)
Frame = +1
Query: 316 IKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALKKD 495
+ LP ++ GR E++I D+ CSR Q+ L AD K V + QLG N S LDG L +
Sbjct: 13 VVLPDGRALMFGRGPESRISDKKCSRHQVKLVADYAKQEVLVTQLGPNPSSLDGQCLGRG 72
Query: 496 EVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLEDDSTSQRNKS 657
E + G T+ ++ ++ +EF + S + K K+ ++S QR KS
Sbjct: 73 ESGCLTTGQTLYLVNESYPFTVEF-AFHCGIQLSSSPQKKEKITNES-KQRQKS 124
>UniRef50_Q96T60 Cluster: Bifunctional polynucleotide
phosphatase/kinase (Polynucleotide kinase-
3'-phosphatase) (DNA 5'-kinase/3'-phosphatase)
[Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32)
(2'(3')-polynucleotidase); Polynucleotide
5'-hydroxyl-kinase (EC 2.7.1.78)]; n=21; Theria|Rep:
Bifunctional polynucleotide phosphatase/kinase
(Polynucleotide kinase- 3'-phosphatase) (DNA
5'-kinase/3'-phosphatase) [Includes: Polynucleotide
3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase);
Polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78)] - Homo
sapiens (Human)
Length = 521
Score = 52.4 bits (120), Expect = 1e-05
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 313 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 489
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 490 KDEVYEIGHGSTIEILLNNHVHILEFDP--PPES 585
+G G T+ ++ H L ++ PES
Sbjct: 81 PGLEGSLGVGDTLYLVNGLHPLTLRWEETRTPES 114
>UniRef50_Q05FM2 Cluster: Lysyl-tRNA synthetase; n=1; Candidatus
Carsonella ruddii PV|Rep: Lysyl-tRNA synthetase -
Carsonella ruddii (strain PV)
Length = 381
Score = 33.9 bits (74), Expect = 5.5
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 224 SFYEFNFCMTYLTNMVFFFNWYLTRFSIKIFYKIGSKARKI-LL*VHLSINFLKN*KLNY 48
SF E +L + +FFFN Y FSIK F+K S + L+ +I FLKN L +
Sbjct: 192 SFLELFIKNIFLIHSIFFFNIYKIIFSIKQFFKKKSIIELLCLVAKKKNIKFLKNTNLLF 251
Query: 47 VKILR 33
+++
Sbjct: 252 YFLIK 256
>UniRef50_Q54B72 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 563
Score = 33.9 bits (74), Expect = 5.5
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Frame = +1
Query: 346 VGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGL-----DGFA-LKKDEVYE 507
+GR +++++ CSR+Q+++ + + V I G+N S L + F + KD+ Y
Sbjct: 32 IGRGTFEQLQEKKCSRKQITITLNDDT--VYISSTGINPSYLKKANQEFFVQMAKDQNYT 89
Query: 508 IGHGSTIEILLNNHVHILEFDPPPESLATSQN---QTFKRKLEDDSTSQR 648
+ G +L + ++ F P + + N Q K++ + DS Q+
Sbjct: 90 LEDGDCFSLLFEMYTFLVTFQPINNNNNNNDNNKSQDDKKRKQIDSQQQQ 139
>UniRef50_Q3VMC6 Cluster: VCBS precursor; n=1; Pelodictyon
phaeoclathratiforme BU-1|Rep: VCBS precursor -
Pelodictyon phaeoclathratiforme BU-1
Length = 4547
Score = 33.5 bits (73), Expect = 7.3
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTF 612
Q G +G++ L DEV GS + L +H + PPP+S + N F
Sbjct: 3915 QAGTIVTGMERMVLPGDEVIYTASGSGGDATLQTLLHNITLTPPPDSNENNHNDLF 3970
>UniRef50_Q0E6C9 Cluster: FiwA protein; n=4; root|Rep: FiwA protein
- Pseudomonas aeruginosa
Length = 231
Score = 33.5 bits (73), Expect = 7.3
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 545 LFNKISIVDPCPISYTSSFLRAKPSNPEAFTPS 447
L NK+ +DP P+S+T F +A+ P+ TP+
Sbjct: 170 LLNKVCGLDPAPLSFTELFAQAQRQAPQVATPA 202
>UniRef50_Q6MCD6 Cluster: Putative uncharacterized protein; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative uncharacterized protein - Protochlamydia
amoebophila (strain UWE25)
Length = 868
Score = 33.1 bits (72), Expect = 9.6
Identities = 21/100 (21%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = +1
Query: 325 PHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDG--FALKK-- 492
PH ++ + ++ I+D++C R+ S K + E H+++ +L LD ALKK
Sbjct: 210 PHIIENEISEIRQKLIEDEACLRKLESDKKNWETLHIDLTRLQEQCVKLDSQRLALKKVY 269
Query: 493 -DEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQT 609
D ++ + T+E++ + + + + ++ + Q+
Sbjct: 270 ADVFEQMTYEKTLEVIGQDKAKVKQLQQKLDQISRIKKQS 309
>UniRef50_Q4UFU6 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 2184
Score = 33.1 bits (72), Expect = 9.6
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -1
Query: 526 LLIHVQFHTLHLF*GQNHLTQKRLLLVVLSLHDIFHN 416
LL +V FH +++F N + Q +LL+ +L LH+ ++
Sbjct: 1763 LLDNVNFHVVYIFDNYNDIIQNKLLINILKLHEYVYD 1799
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,810,787
Number of Sequences: 1657284
Number of extensions: 13510122
Number of successful extensions: 26758
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 25758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26742
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -