Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_B10
(883 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 26 0.45
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.2
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 23 4.2
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 5.5
DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory pro... 21 9.7
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 21 9.7
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 25.8 bits (54), Expect = 0.45
Identities = 6/20 (30%), Positives = 15/20 (75%)
Frame = +3
Query: 225 MLYGTHYSCCTYYYHVSFML 284
+++ H+ CTYY++ +F++
Sbjct: 90 IIFTVHFLLCTYYFYYAFII 109
Score = 25.8 bits (54), Expect = 0.45
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +3
Query: 252 CTYYYHVSFMLFEMFVRYTCAY 317
C Y++ +F++F M + + CA+
Sbjct: 165 CIYHFFCAFIIFTMHLLFCCAF 186
Score = 23.8 bits (49), Expect = 1.8
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = +3
Query: 252 CTYYYHVSFMLFEMFVRYTC 311
C YY++ +F++F + + + C
Sbjct: 211 CIYYFYSAFIIFTIHLLFYC 230
Score = 23.0 bits (47), Expect = 3.2
Identities = 7/23 (30%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 252 CTYYYHVSFMLFEMFVRY-TCAY 317
C YY++ +F++F + + + C Y
Sbjct: 112 CVYYFYYAFIIFTVHLLFLLCIY 134
Score = 22.6 bits (46), Expect = 4.2
Identities = 7/23 (30%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 252 CTYYYHVSFMLFEMFVRY-TCAY 317
C YY++ +F++F + + + C Y
Sbjct: 145 CIYYFYCAFIIFTVHLLFLLCIY 167
Score = 22.6 bits (46), Expect = 4.2
Identities = 8/23 (34%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 252 CTYYYHVSFMLFEM-FVRYTCAY 317
C YY++ +F+LF + + C Y
Sbjct: 237 CIYYFYYAFILFTVHLLLLVCIY 259
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 255 TYYYHVSFMLFEMFVRYTC 311
++YY++ +LF M V +TC
Sbjct: 946 SFYYNIIPILFFMLVCFTC 964
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 255 TYYYHVSFMLFEMFVRYTC 311
++YY++ +LF M V +TC
Sbjct: 946 SFYYNIIPILFFMLVCFTC 964
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 255 TYYYHVSFMLFEMFVRYTC 311
++YY++ +LF M V +TC
Sbjct: 946 SFYYNIIPILFFMLVCFTC 964
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 255 TYYYHVSFMLFEMFVRYTC 311
++YY++ +LF M V +TC
Sbjct: 946 SFYYNIIPILFFMLVCFTC 964
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 382 SCSRQQLSLKADCEKCHVEIKQLG 453
SC L D + CH+EI+ G
Sbjct: 166 SCPMNLQYLPMDRQLCHIEIESFG 189
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 361 LYCALQLFVRCE 326
+YC+L +FV CE
Sbjct: 414 VYCSLAIFVLCE 425
>DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory
protein 19 protein.
Length = 119
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +1
Query: 403 SLKADCEKCHVEIKQL 450
+LK+DC KC + K++
Sbjct: 65 ALKSDCAKCSEKQKEM 80
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 21.4 bits (43), Expect = 9.7
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +2
Query: 218 KNYVIRYALFMLYVLLSCLVYAF*DVC*IHMRLLNF 325
K++ + +A+F LY++L L A+ + + +R+ +
Sbjct: 111 KSFRMNFAIFNLYMVLLLLFDAYLWISSVGVRMFQY 146
Score = 21.4 bits (43), Expect = 9.7
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 201 TKVKFIKTMLYGTHYSCCTYYYHVSFMLFEMFVRYTCAY*TS 326
+K + I+ + +GT+ + + +LF + + Y CA TS
Sbjct: 268 SKSRNIEGVSFGTNLVILCALWITTLLLFTILLAYGCAGATS 309
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,969
Number of Sequences: 336
Number of extensions: 3982
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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