Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_B10
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541...    30   2.8  
05_01_0119 + 820566-820739,822708-822737,823153-823266,823341-82...    29   3.7  
10_08_0850 + 21050164-21050189,21050874-21050979,21051186-210512...    29   4.9  
02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619     29   6.5  
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241...    28   8.6  
03_05_0346 + 23335753-23335854,23336268-23336473,23336530-233367...    28   8.6  

>10_02_0113 +
           5410413-5410471,5411330-5413309,5413535-5413594,
           5416037-5418047
          Length = 1369

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 511 QFHTLHLF*GQNHLTQKRLLLVVLSLHDIFHNLL 410
           QFH  HL  G   +T  R+LLVVL +  +  NL+
Sbjct: 651 QFHAKHLSTGGEFVTHVRILLVVLGIPFLSSNLV 684


>05_01_0119 +
           820566-820739,822708-822737,823153-823266,823341-823433,
           823521-823586,824076-824174,824480-824559,825039-825151,
           825600-825688,825955-826041,826128-826130,826285-826383
          Length = 348

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 503 YTSSFLRAKPSNPEAFTPS 447
           YT SFLR+KP  P A  PS
Sbjct: 324 YTKSFLRSKPQKPAAANPS 342


>10_08_0850 + 21050164-21050189,21050874-21050979,21051186-21051257,
            21051775-21051828,21052077-21052184,21052653-21052802,
            21052914-21053258,21053361-21054801,21054844-21055675,
            21057060-21057325,21057530-21059603,21060172-21060442,
            21060556-21060990
          Length = 2059

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 487  KKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLEDDSTS 642
            K+++V+++        LL     ++  D  PE L+ S N+T  +  E  STS
Sbjct: 1027 KENQVFQVAEAFLFSSLLRYENILIAMDLLPEVLSVSMNRTVHKSGERQSTS 1078


>02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619
          Length = 398

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +1

Query: 301 DTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
           + +A  KL H+V I         +  Q  S+QQ +++  C  C  ++K
Sbjct: 96  EAYAKEKLAHSVLIESSPGLSLSLNSQPASKQQCAMELACPLCRGDVK 143


>10_08_0765 -
           20421813-20423174,20423591-20423771,20423862-20424117,
           20424768-20425095,20425218-20426156,20427015-20427761,
           20428517-20428789
          Length = 1361

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 242 MRTV*HSFYEFNFCMTYLTNMVFFFN-WYLTRFSIKIFYKI 123
           M T  +S   ++FC TYLTNM+ +   W + R  + +  KI
Sbjct: 290 MGTCGNSSKRWSFCATYLTNMITYDRVWVVLRRGLTMDSKI 330


>03_05_0346 +
           23335753-23335854,23336268-23336473,23336530-23336705,
           23336832-23337064,23337546-23337963,23338045-23338262,
           23338905-23339168
          Length = 538

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 433 VEIKQLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHV 552
           + +K  G N      F ++KD+V  I HG  I+ + +NHV
Sbjct: 257 ITLKWHGKNRKWHPKFYIRKDQVGYILHGRWIDFVRHNHV 296


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,020,752
Number of Sequences: 37544
Number of extensions: 346844
Number of successful extensions: 640
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)