Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_B10
(883 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208834-1|AAP86324.1| 337|Homo sapiens FHA-HIT isoform protein. 93 9e-19
AY208829-1|AAP86319.1| 356|Homo sapiens FHA-HIT short isoform p... 93 9e-19
AY040777-1|AAK91768.1| 356|Homo sapiens forkhead-associated dom... 93 9e-19
AL353717-3|CAI15730.1| 306|Homo sapiens aprataxin protein. 93 9e-19
AL353717-2|CAI15728.1| 356|Homo sapiens aprataxin protein. 93 9e-19
AL162590-3|CAI15551.1| 306|Homo sapiens aprataxin protein. 93 9e-19
AL162590-2|CAI15549.1| 356|Homo sapiens aprataxin protein. 93 9e-19
BX538161-1|CAD98041.1| 292|Homo sapiens hypothetical protein pr... 92 2e-18
BC104881-1|AAI04882.1| 342|Homo sapiens aprataxin, isoform a pr... 92 2e-18
AY302071-1|AAQ74134.1| 192|Homo sapiens aprataxin variant LE5 p... 92 2e-18
AY302067-1|AAQ74130.1| 342|Homo sapiens aprataxin protein. 92 2e-18
AY208837-1|AAP86327.1| 342|Homo sapiens FHA-HIT aberrant isofor... 92 2e-18
AY208836-1|AAP86326.1| 342|Homo sapiens FHA-HIT aberrant isofor... 92 2e-18
AL353717-8|CAI15735.1| 342|Homo sapiens aprataxin protein. 92 2e-18
AJ565854-1|CAD92458.1| 247|Homo sapiens aprataxin protein. 92 2e-18
AY208831-1|AAP86321.1| 284|Homo sapiens FHA-HIT isoform protein. 84 6e-16
AL353717-1|CAI15729.1| 280|Homo sapiens aprataxin protein. 84 6e-16
AL162590-1|CAI15550.1| 280|Homo sapiens aprataxin protein. 84 6e-16
AY302073-1|AAQ74136.1| 85|Homo sapiens aprataxin variant LP3E5... 66 2e-10
AY302069-1|AAQ74132.1| 85|Homo sapiens aprataxin variant LP3 p... 66 2e-10
BC033822-1|AAH33822.1| 521|Homo sapiens polynucleotide kinase 3... 52 2e-06
AY133033-1|AAM82170.1| 521|Homo sapiens polynucleotide kinase 3... 52 2e-06
AF354258-1|AAK57340.1| 521|Homo sapiens polynucleotide kinase-3... 52 2e-06
AF126486-1|AAD51135.1| 521|Homo sapiens polynucleotide kinase-3... 52 2e-06
AF125807-1|AAD50639.1| 521|Homo sapiens DNA 5'-kinase/3'-phosph... 52 2e-06
AF120499-1|AAD47379.1| 398|Homo sapiens DEM1 protein protein. 52 2e-06
AY208832-1|AAP86322.1| 302|Homo sapiens FHA-HIT isoform 1 protein. 48 3e-05
AY208830-1|AAP86320.1| 302|Homo sapiens FHA-HIT short isoform p... 48 3e-05
AY302074-1|AAQ74137.1| 49|Homo sapiens aprataxin variant LP2P3... 48 6e-05
AY302072-1|AAQ74135.1| 49|Homo sapiens aprataxin variant LP2E5... 48 6e-05
AY302070-1|AAQ74133.1| 49|Homo sapiens aprataxin variant LP2P3... 48 6e-05
AY302068-1|AAQ74131.1| 49|Homo sapiens aprataxin variant LP2 p... 48 6e-05
AY208833-1|AAP86323.1| 288|Homo sapiens FHA-HIT isoform 2 protein. 47 8e-05
AJ565855-1|CAD92459.1| 193|Homo sapiens aprataxin protein. 47 8e-05
>AY208834-1|AAP86324.1| 337|Homo sapiens FHA-HIT isoform protein.
Length = 337
Score = 93.5 bits (222), Expect = 9e-19
Identities = 43/124 (34%), Positives = 74/124 (59%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKL 624
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSG 133
Query: 625 EDDS 636
DS
Sbjct: 134 NSDS 137
>AY208829-1|AAP86319.1| 356|Homo sapiens FHA-HIT short isoform
protein.
Length = 356
Score = 93.5 bits (222), Expect = 9e-19
Identities = 43/124 (34%), Positives = 74/124 (59%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKL 624
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSG 133
Query: 625 EDDS 636
DS
Sbjct: 134 NSDS 137
>AY040777-1|AAK91768.1| 356|Homo sapiens forkhead-associated domain
histidine-triad like protein protein.
Length = 356
Score = 93.5 bits (222), Expect = 9e-19
Identities = 43/124 (34%), Positives = 74/124 (59%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKL 624
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSG 133
Query: 625 EDDS 636
DS
Sbjct: 134 NSDS 137
>AL353717-3|CAI15730.1| 306|Homo sapiens aprataxin protein.
Length = 306
Score = 93.5 bits (222), Expect = 9e-19
Identities = 43/124 (34%), Positives = 74/124 (59%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKL 624
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSG 133
Query: 625 EDDS 636
DS
Sbjct: 134 NSDS 137
>AL353717-2|CAI15728.1| 356|Homo sapiens aprataxin protein.
Length = 356
Score = 93.5 bits (222), Expect = 9e-19
Identities = 43/124 (34%), Positives = 74/124 (59%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKL 624
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSG 133
Query: 625 EDDS 636
DS
Sbjct: 134 NSDS 137
>AL162590-3|CAI15551.1| 306|Homo sapiens aprataxin protein.
Length = 306
Score = 93.5 bits (222), Expect = 9e-19
Identities = 43/124 (34%), Positives = 74/124 (59%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKL 624
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSG 133
Query: 625 EDDS 636
DS
Sbjct: 134 NSDS 137
>AL162590-2|CAI15549.1| 356|Homo sapiens aprataxin protein.
Length = 356
Score = 93.5 bits (222), Expect = 9e-19
Identities = 43/124 (34%), Positives = 74/124 (59%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKL 624
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSG 133
Query: 625 EDDS 636
DS
Sbjct: 134 NSDS 137
>BX538161-1|CAD98041.1| 292|Homo sapiens hypothetical protein
protein.
Length = 292
Score = 92.3 bits (219), Expect = 2e-18
Identities = 43/123 (34%), Positives = 73/123 (59%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 447
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 448 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLE 627
+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGN 120
Query: 628 DDS 636
DS
Sbjct: 121 SDS 123
>BC104881-1|AAI04882.1| 342|Homo sapiens aprataxin, isoform a
protein.
Length = 342
Score = 92.3 bits (219), Expect = 2e-18
Identities = 43/123 (34%), Positives = 73/123 (59%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 447
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 448 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLE 627
+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGN 120
Query: 628 DDS 636
DS
Sbjct: 121 SDS 123
>AY302071-1|AAQ74134.1| 192|Homo sapiens aprataxin variant LE5
protein.
Length = 192
Score = 92.3 bits (219), Expect = 2e-18
Identities = 43/123 (34%), Positives = 73/123 (59%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 447
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 448 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLE 627
+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGN 120
Query: 628 DDS 636
DS
Sbjct: 121 SDS 123
>AY302067-1|AAQ74130.1| 342|Homo sapiens aprataxin protein.
Length = 342
Score = 92.3 bits (219), Expect = 2e-18
Identities = 43/123 (34%), Positives = 73/123 (59%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 447
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 448 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLE 627
+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGN 120
Query: 628 DDS 636
DS
Sbjct: 121 SDS 123
>AY208837-1|AAP86327.1| 342|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 342
Score = 92.3 bits (219), Expect = 2e-18
Identities = 43/123 (34%), Positives = 73/123 (59%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 447
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 448 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLE 627
+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGN 120
Query: 628 DDS 636
DS
Sbjct: 121 SDS 123
>AY208836-1|AAP86326.1| 342|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 342
Score = 92.3 bits (219), Expect = 2e-18
Identities = 43/123 (34%), Positives = 73/123 (59%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 447
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 448 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLE 627
+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGN 120
Query: 628 DDS 636
DS
Sbjct: 121 SDS 123
>AL353717-8|CAI15735.1| 342|Homo sapiens aprataxin protein.
Length = 342
Score = 92.3 bits (219), Expect = 2e-18
Identities = 43/123 (34%), Positives = 73/123 (59%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 447
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 448 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLE 627
+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGN 120
Query: 628 DDS 636
DS
Sbjct: 121 SDS 123
>AJ565854-1|CAD92458.1| 247|Homo sapiens aprataxin protein.
Length = 247
Score = 92.3 bits (219), Expect = 2e-18
Identities = 43/123 (34%), Positives = 73/123 (59%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 447
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 448 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFDPPPESLATSQNQTFKRKLE 627
+GVN + +D + KD+ ++ G + ++ + +I+EF+ ++ ++ KR
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGN 120
Query: 628 DDS 636
DS
Sbjct: 121 SDS 123
>AY208831-1|AAP86321.1| 284|Homo sapiens FHA-HIT isoform protein.
Length = 284
Score = 84.2 bits (199), Expect = 6e-16
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEI 534
Q+GVN + +D + KD+ ++ G + +
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHM 103
>AL353717-1|CAI15729.1| 280|Homo sapiens aprataxin protein.
Length = 280
Score = 84.2 bits (199), Expect = 6e-16
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEI 534
Q+GVN + +D + KD+ ++ G + +
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHM 103
>AL162590-1|CAI15550.1| 280|Homo sapiens aprataxin protein.
Length = 280
Score = 84.2 bits (199), Expect = 6e-16
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 444
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 445 QLGVNASGLDGFALKKDEVYEIGHGSTIEI 534
Q+GVN + +D + KD+ ++ G + +
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHM 103
>AY302073-1|AAQ74136.1| 85|Homo sapiens aprataxin variant LP3E5
protein.
Length = 85
Score = 66.1 bits (154), Expect = 2e-10
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 447
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
>AY302069-1|AAQ74132.1| 85|Homo sapiens aprataxin variant LP3
protein.
Length = 85
Score = 66.1 bits (154), Expect = 2e-10
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 447
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
>BC033822-1|AAH33822.1| 521|Homo sapiens polynucleotide kinase
3'-phosphatase protein.
Length = 521
Score = 52.4 bits (120), Expect = 2e-06
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 313 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 489
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 490 KDEVYEIGHGSTIEILLNNHVHILEFDP--PPES 585
+G G T+ ++ H L ++ PES
Sbjct: 81 PGLEGSLGVGDTLYLVNGLHPLTLRWEETRTPES 114
>AY133033-1|AAM82170.1| 521|Homo sapiens polynucleotide kinase
3'-phosphatase protein.
Length = 521
Score = 52.4 bits (120), Expect = 2e-06
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 313 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 489
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 490 KDEVYEIGHGSTIEILLNNHVHILEFDP--PPES 585
+G G T+ ++ H L ++ PES
Sbjct: 81 PGLEGSLGVGDTLYLVNGLHPLTLRWEETRTPES 114
>AF354258-1|AAK57340.1| 521|Homo sapiens polynucleotide
kinase-3'-phosphatase protein.
Length = 521
Score = 52.4 bits (120), Expect = 2e-06
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 313 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 489
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 490 KDEVYEIGHGSTIEILLNNHVHILEFDP--PPES 585
+G G T+ ++ H L ++ PES
Sbjct: 81 PGLEGSLGVGDTLYLVNGLHPLTLRWEETRTPES 114
>AF126486-1|AAD51135.1| 521|Homo sapiens polynucleotide
kinase-3'-phosphatase protein.
Length = 521
Score = 52.4 bits (120), Expect = 2e-06
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 313 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 489
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 490 KDEVYEIGHGSTIEILLNNHVHILEFDP--PPES 585
+G G T+ ++ H L ++ PES
Sbjct: 81 PGLEGSLGVGDTLYLVNGLHPLTLRWEETRTPES 114
>AF125807-1|AAD50639.1| 521|Homo sapiens DNA
5'-kinase/3'-phosphatase protein.
Length = 521
Score = 52.4 bits (120), Expect = 2e-06
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 313 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 489
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 490 KDEVYEIGHGSTIEILLNNHVHILEFDP--PPES 585
+G G T+ ++ H L ++ PES
Sbjct: 81 PGLEGSLGVGDTLYLVNGLHPLTLRWEETRTPES 114
>AF120499-1|AAD47379.1| 398|Homo sapiens DEM1 protein protein.
Length = 398
Score = 52.4 bits (120), Expect = 2e-06
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 313 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 489
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 490 KDEVYEIGHGSTIEILLNNHVHILEFDP--PPES 585
+G G T+ ++ H L ++ PES
Sbjct: 81 PGLEGSLGVGDTLYLVNGLHPLTLRWEETRTPES 114
>AY208832-1|AAP86322.1| 302|Homo sapiens FHA-HIT isoform 1 protein.
Length = 302
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQ 399
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQ 58
>AY208830-1|AAP86320.1| 302|Homo sapiens FHA-HIT short isoform
protein.
Length = 302
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 265 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQ 399
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQ 58
>AY302074-1|AAQ74137.1| 49|Homo sapiens aprataxin variant LP2P3E5
protein.
Length = 49
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQL 402
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQV 45
>AY302072-1|AAQ74135.1| 49|Homo sapiens aprataxin variant LP2E5
protein.
Length = 49
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQL 402
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQV 45
>AY302070-1|AAQ74133.1| 49|Homo sapiens aprataxin variant LP2P3
protein.
Length = 49
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQL 402
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQV 45
>AY302068-1|AAQ74131.1| 49|Homo sapiens aprataxin variant LP2
protein.
Length = 49
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQL 402
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQV 45
>AY208833-1|AAP86323.1| 288|Homo sapiens FHA-HIT isoform 2 protein.
Length = 288
Score = 47.2 bits (107), Expect = 8e-05
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQ 399
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQ 44
>AJ565855-1|CAD92459.1| 193|Homo sapiens aprataxin protein.
Length = 193
Score = 47.2 bits (107), Expect = 8e-05
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1
Query: 268 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQ 399
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQ 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,842,638
Number of Sequences: 237096
Number of extensions: 2042664
Number of successful extensions: 3214
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3214
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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