Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_B09
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 118 7e-27
Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical pr... 105 6e-23
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 96 3e-20
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 72 6e-13
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 72 6e-13
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 64 2e-10
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 61 9e-10
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 61 1e-09
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 57 1e-08
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 57 1e-08
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 57 1e-08
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 56 3e-08
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 52 7e-07
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 52 7e-07
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 50 2e-06
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 41 0.001
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 41 0.001
Z81484-10|CAE11298.1| 328|Caenorhabditis elegans Hypothetical p... 28 7.7
Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical p... 28 7.7
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 118 bits (283), Expect = 7e-27
Identities = 61/141 (43%), Positives = 84/141 (59%)
Frame = +1
Query: 310 KAQVSAVTNEDESFLKTSNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQI 489
KA++ N + + LK NY +++ YP++ LYS G SVEGR+L VL I
Sbjct: 62 KAKIGDFINVNSTKLKNHNY---NEMTAWLKATRLNYPNITHLYSAGKSVEGRELWVLII 118
Query: 490 TQDVQNEHPERPAFKYVANMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLM 669
+ + P K V NMHG+E +GR+ V+YLA+ L LNYGKN+ +T LVN+ IHLM
Sbjct: 119 SDKPKEHKLMEPELKIVGNMHGNEVVGREAVLYLAEILCLNYGKNKYLTDLVNNARIHLM 178
Query: 670 PSLNPDGFEASEEGNCESLRG 732
PS+NPDG+E G+ S G
Sbjct: 179 PSMNPDGYEKGFPGDRISAMG 199
>Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical
protein T27A8.1 protein.
Length = 492
Score = 105 bits (251), Expect = 6e-23
Identities = 53/123 (43%), Positives = 74/123 (60%)
Frame = +1
Query: 364 NYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYVA 543
++ Y L L +P+L +YS G SV+GR+L VL +++ P FKYVA
Sbjct: 57 SHMNYSTLTDHIHNLHRKFPNLTHIYSAGQSVQGRELWVLVVSRYPIEHRKLIPEFKYVA 116
Query: 544 NMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEASEEGNCES 723
NMHG+E GR ++ LA LL NY N + +LV+ST IHLMPS+NPDG+E + EG+
Sbjct: 117 NMHGNEVTGRVFLVSLAHTLLENYNSNLWIRQLVDSTRIHLMPSMNPDGYEHASEGDQAG 176
Query: 724 LRG 732
+ G
Sbjct: 177 VTG 179
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 95.9 bits (228), Expect = 3e-20
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
Frame = +1
Query: 322 SAVTNEDESFLKTSNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDV 501
S T++D++ + +Y QL ++ P++ LY IG SVEGR L+V+Q +
Sbjct: 27 SGSTHKDDA--EWGHYHNQAQLEAKLGEINEKCPEITTLYEIGQSVEGRPLVVIQFSTTP 84
Query: 502 QNEHPERPAFKYVANMHGDESIGRQIVIYLAQYLLLNYGKNER-VTKLVNSTDIHLMPSL 678
P +P K + NMHG+E IGR++++ A+ L N++ + +L+NST IH++PS+
Sbjct: 85 GEHIPTKPEVKLIGNMHGNEPIGRELLLRFAETLCNGAINNDKEIVQLLNSTSIHILPSM 144
Query: 679 NPDGFE 696
NPDGFE
Sbjct: 145 NPDGFE 150
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 71.7 bits (168), Expect = 6e-13
Identities = 39/116 (33%), Positives = 61/116 (52%)
Frame = +1
Query: 367 YTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYVAN 546
Y +++ +L+ YP + L IG S E R LLV++IT +N + + A
Sbjct: 128 YNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGK-RNPLGSKISMWIDAG 186
Query: 547 MHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEASEEGN 714
+H E I +Y+A LLL Y + V KL++ D +++P +NPDG+E S E N
Sbjct: 187 IHAREWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYSREKN 242
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 71.7 bits (168), Expect = 6e-13
Identities = 39/116 (33%), Positives = 61/116 (52%)
Frame = +1
Query: 367 YTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYVAN 546
Y +++ +L+ YP + L IG S E R LLV++IT +N + + A
Sbjct: 128 YNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGK-RNPLGSKISMWIDAG 186
Query: 547 MHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEASEEGN 714
+H E I +Y+A LLL Y + V KL++ D +++P +NPDG+E S E N
Sbjct: 187 IHAREWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYSREKN 242
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/122 (27%), Positives = 62/122 (50%)
Frame = +1
Query: 364 NYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYVA 543
+Y Y + +E YP +AK+ IG + EG+ + L+I ++ H +R +
Sbjct: 160 DYASYADMVKYMRTIEFYYPRIAKIVRIGATHEGKPIEGLKI--GARSSHKKRAVW-VDG 216
Query: 544 NMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEASEEGNCES 723
N+H E +Y L+ YGK+ ++T V++ D +++P LNPDG+E + +
Sbjct: 217 NIHAREWASSHTALYFINQLVSEYGKDAQITNYVDTLDFYIVPCLNPDGYEYTRTSPIPT 276
Query: 724 LR 729
+R
Sbjct: 277 VR 278
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 61.3 bits (142), Expect = 9e-10
Identities = 31/115 (26%), Positives = 60/115 (52%)
Frame = +1
Query: 358 TSNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKY 537
T+ Y Y+++ L D+ ++ + S EGR + ++I + PE+P+
Sbjct: 144 TNAYHSYNEMVEFMKLLSEQKSDMVEMVKVATSSEGRSIYGVKIHPPGPSP-PEKPSIIV 202
Query: 538 VANMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEAS 702
A +H E I + +++ + ++ YG+N +VT + D ++MP +NPDG+E S
Sbjct: 203 DAGVHAREWIAPAVGLFMIRKIVEEYGRNPQVTANLQKFDWYIMPQVNPDGYEYS 257
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 60.9 bits (141), Expect = 1e-09
Identities = 32/110 (29%), Positives = 59/110 (53%)
Frame = +1
Query: 400 DKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYVANMHGDESIGRQI 579
+ L TYP+L + IG + EGR++ +++IT +N +R + +H E +
Sbjct: 136 NSLAITYPELVSVQPIGTTHEGRQIPLIKITNK-RNGGTKRGIW-VDGGIHAREWVSPST 193
Query: 580 VIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEASEEGNCESLR 729
V+Y L+ Y K+ ++ + V+ + +++P LNPDG+E S N +R
Sbjct: 194 VLYFIHQLVTQYDKDVQIKQFVDQLEWYIVPLLNPDGYEYSRSSNDPEIR 243
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/117 (24%), Positives = 57/117 (48%)
Frame = +1
Query: 346 SFLKTSNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERP 525
S L+ Y Y L +++ PD+AKL +G ++EGR +L L+ +D P++
Sbjct: 89 SRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDT----PDKK 144
Query: 526 AFKYVANMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFE 696
A +H E Y ++ ++ ++ +++ ++++P LNPDG+E
Sbjct: 145 IVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYE 201
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/117 (24%), Positives = 57/117 (48%)
Frame = +1
Query: 346 SFLKTSNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERP 525
S L+ Y Y L +++ PD+AKL +G ++EGR +L L+ +D P++
Sbjct: 89 SRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDT----PDKK 144
Query: 526 AFKYVANMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFE 696
A +H E Y ++ ++ ++ +++ ++++P LNPDG+E
Sbjct: 145 IVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYE 201
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/117 (24%), Positives = 57/117 (48%)
Frame = +1
Query: 346 SFLKTSNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERP 525
S L+ Y Y L +++ PD+AKL +G ++EGR +L L+ +D P++
Sbjct: 89 SRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDT----PDKK 144
Query: 526 AFKYVANMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFE 696
A +H E Y ++ ++ ++ +++ ++++P LNPDG+E
Sbjct: 145 IVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYE 201
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/114 (29%), Positives = 57/114 (50%)
Frame = +1
Query: 361 SNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYV 540
+ Y YD+ + L YP+ KL +IGNS EGR + ++I D + +P
Sbjct: 117 TRYLSYDEQMKFLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSS----KPIVWID 172
Query: 541 ANMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEAS 702
A +H E I + +YL Y +++ L++S + ++P+ NPDG+E S
Sbjct: 173 AGIHAREWISYNVALYLI-YTIVS---QPAYRNLLDSVQLVVVPNTNPDGYEYS 222
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/114 (29%), Positives = 57/114 (50%)
Frame = +1
Query: 361 SNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYV 540
+ Y YD+ + L YP+ KL +IGNS EGR + ++I D + +P
Sbjct: 117 TRYLSYDEQMKFLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSS----KPIVWID 172
Query: 541 ANMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEAS 702
A +H E I + +YL Y +++ L++S + ++P+ NPDG+E S
Sbjct: 173 AGIHAREWISYNVALYLI-YTIVS---QPAYRNLLDSVQLVVVPNTNPDGYEYS 222
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/112 (25%), Positives = 52/112 (46%)
Frame = +1
Query: 367 YTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYVAN 546
Y Y + +E YPD AK++++G + EGR + ++I V ++ F
Sbjct: 141 YHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRN--DKRIFWIDGG 198
Query: 547 MHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEAS 702
+H E ++ L+ +Y + V V+ + +++P NPDG+E S
Sbjct: 199 IHAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYEYS 250
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/112 (25%), Positives = 52/112 (46%)
Frame = +1
Query: 367 YTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYVAN 546
Y Y + +E YPD AK++++G + EGR + ++I V ++ F
Sbjct: 141 YHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRN--DKRIFWIDGG 198
Query: 547 MHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEAS 702
+H E ++ L+ +Y + V V+ + +++P NPDG+E S
Sbjct: 199 IHAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYEYS 250
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/127 (25%), Positives = 56/127 (44%)
Frame = +1
Query: 349 FLKTSNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPA 528
F + Y + Q + P +L +IG + EGR LL ++I + +
Sbjct: 29 FFDLTVYNDWPQFEDYIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAV 88
Query: 529 FKYVANMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEASEE 708
+ N H E + +Y + L+ Y ++++TK V + DI++ P LNPDGF S
Sbjct: 89 WLDGGN-HAREWPAFHVAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYSRT 147
Query: 709 GNCESLR 729
+R
Sbjct: 148 STRAMIR 154
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/127 (25%), Positives = 56/127 (44%)
Frame = +1
Query: 349 FLKTSNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPA 528
F + Y + Q + P +L +IG + EGR LL ++I + +
Sbjct: 29 FFDLTVYNDWPQFEDYIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAV 88
Query: 529 FKYVANMHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFEASEE 708
+ N H E + +Y + L+ Y ++++TK V + DI++ P LNPDGF S
Sbjct: 89 WLDGGN-HAREWPAFHVAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYSRT 147
Query: 709 GNCESLR 729
+R
Sbjct: 148 STRAMIR 154
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/110 (24%), Positives = 48/110 (43%)
Frame = +1
Query: 367 YTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYVAN 546
Y Y ++ +L YP + + SIG + EGR + ++I D + + F
Sbjct: 128 YGSYQRMTDWMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRT----KKIFWIDGG 183
Query: 547 MHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFE 696
+H E ++ + L + + KL+N ++P LNPDG+E
Sbjct: 184 IHAREWAAPHTALFFI-HQLTSRANEPGIKKLLNEITFVVVPCLNPDGYE 232
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/110 (24%), Positives = 48/110 (43%)
Frame = +1
Query: 367 YTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPERPAFKYVAN 546
Y Y ++ +L YP + + SIG + EGR + ++I D + + F
Sbjct: 128 YGSYQRMTDWMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRT----KKIFWIDGG 183
Query: 547 MHGDESIGRQIVIYLAQYLLLNYGKNERVTKLVNSTDIHLMPSLNPDGFE 696
+H E ++ + L + + KL+N ++P LNPDG+E
Sbjct: 184 IHAREWAAPHTALFFI-HQLTSRANEPGIKKLLNEITFVVVPCLNPDGYE 232
>Z81484-10|CAE11298.1| 328|Caenorhabditis elegans Hypothetical
protein C47A10.11 protein.
Length = 328
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 262 YRWIRMLILLFSLTIA--KAQVSAVTNEDESFLKTSNYTKYDQLGILFDKLES 414
+R+IR L+L+F+ TIA V+ + D+ + + + K ++ I FD ES
Sbjct: 127 WRYIRYLLLIFNYTIAIFSGMVTCLEIPDQQYARAIVFAKNSEI-IQFDLPES 178
>Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical
protein T09A5.12 protein.
Length = 708
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/83 (27%), Positives = 33/83 (39%)
Frame = +1
Query: 343 ESFLKTSNYTKYDQLGILFDKLESTYPDLAKLYSIGNSVEGRKLLVLQITQDVQNEHPER 522
E+ L + + L D L T+ + + S G+ GR L V +T + ER
Sbjct: 345 EAPLVKRTFANREMLQSWLDSLRETHA-VEFVVSSGSKKWGRGLQVHYLTCSRSGDQKER 403
Query: 523 PAFKYVANMHGDESIGRQIVIYL 591
P KYV GR + YL
Sbjct: 404 PNKKYVRPPRPSIKCGRNCMAYL 426
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,783,394
Number of Sequences: 27780
Number of extensions: 418480
Number of successful extensions: 1120
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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