Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_B07
(912 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 1e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.015
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 35 0.018
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.024
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.043
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.043
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 32 0.098
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.23
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.23
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.30
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 28 1.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 4.4
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 4.9
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 8.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.9 bits (94), Expect = 1e-04
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Frame = +1
Query: 463 PPXXPP--PPPGXXXXXXGXPXLPP--PXXPXAPXXXGGXXVSPP-PXGGPXXPPXPGXX 627
PP PP PP G P PP P P AP G +PP P P PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Query: 628 P 630
P
Sbjct: 484 P 484
Score = 32.7 bits (71), Expect = 0.074
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 475 PPPPPGXXXXXXGXPXLPPPXXPXAPXXXGGXXVSPPPXGGPXXPPXPGXXP 630
PP P P LPP P P G P P P PP P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLP--MGAPAAPPLPPSAPIAPPLPAGMP 464
Score = 32.7 bits (71), Expect = 0.074
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +1
Query: 460 SPPXXPPPPPGXXXXXXGXPXLPPPXXPXAPXXXGGXXVSPP-PXGGPXXPPXPGXXP 630
+PP PP P P P P AP ++PP P G P PP P P
Sbjct: 419 TPPSLPPSAP--PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 32.3 bits (70), Expect = 0.098
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXXPPPSPP-RXPXPXRXPGXPXPPFPP 898
PP PP P P P PPS P P P P PP PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPA--APPLPP 471
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFPP 898
P G PP G + PP PP S P G PP PP
Sbjct: 317 PSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +2
Query: 773 PPPXGPXKXPXAXPPXXXPPPSPPRXP--XPXRXPGXPXPPFPP 898
PP P P + PP PP +PP P P P P P P
Sbjct: 415 PPVPTPPSLPPSAPP-SLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Score = 29.9 bits (64), Expect = 0.52
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXP-PXXXP--PPSPPRXPX-PXRXPGXPXPPFPP 898
PP PP P P A P P P PP P P P P P PP P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 29.5 bits (63), Expect = 0.69
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 9/57 (15%)
Frame = +1
Query: 475 PPPPPGXXXXXXGXPX---------LPPPXXPXAPXXXGGXXVSPPPXGGPXXPPXP 618
PPPPP G P LPPP P P + PP G PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP--PRSNAAGSIPLPPQGRSAPPPPP 365
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +3
Query: 777 PPXGXTKXPXRXPPXXPPPL-RXXGXXPRPGXXXXRXPPSPP 899
PP G PP PPP G P P PP PP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +2
Query: 773 PPPXGPXKXPXAXPPXXXPP-PSPPRXPXPXRXPGXPXPPFPP 898
PPP P + A PP S P P P P P PP
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 752 PPXXXGGPP--PXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXP 886
PP G P P P P A P P +PP P P P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 8/59 (13%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAX---PPXXXP-----PPSPPRXPXPXRXPGXPXPPFPPXG 904
PP PPP P P PP PP+P P PG P PP G
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP-----PPAIPGRSAPALPPLG 407
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 752 PPXXXGGPP-PXGPXKXPXAXPPXXXPPPSPPRXP 853
PP PP P G P P PPP+P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 26.2 bits (55), Expect = 6.5
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +1
Query: 481 PPPGXXXXXXGXPX-LPPPXXPXAPXXXGGXXVSPPPXGGPXXPPXPGXXPGXXFXPQG 654
PP G P PP P AP P G P PP P P P G
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +1
Query: 475 PPPPPGXXXXXXGXPXLPPPXXPXAPXXXGGXXVSPPPXG----GPXXPPXP 618
PPPPP P P P P AP GG PPP G GP PP P
Sbjct: 732 PPPPPPAVIVPTPAPA-PIPVPPPAPIM-GGPPPPPPPPGVAGAGPPPPPPP 781
Score = 34.3 bits (75), Expect = 0.024
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFPP 898
PP P P P P PPP PP P G P PP PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP--PPGVAGAGPPPPPPPP 782
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +2
Query: 794 KXPXAXPPXXX-PPPSPPRXPXPXRXP--GXPXPPFPPXG 904
K P PP P P+P P P P G P PP PP G
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Frame = +1
Query: 463 PPXXP----PPPPGXXXXXXGXPXLPPPXXPXAPXXXGGXXVSPPPXGGP 600
PP P PPPP G PPP P A G +P P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 755 PXXXGGPPPXGPXKXPXAXPPXXXPPPSPP 844
P G PPP P A PP PPP PP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPP--PPPPPP 783
Score = 29.1 bits (62), Expect = 0.92
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 755 PXXXGGPPPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFPPXGG 907
P P P P PP PPP PP P P PP GG
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPP---PPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 29.1 bits (62), Expect = 0.92
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXXPPPSP 841
P GGPPP P P PPP P
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Frame = +1
Query: 526 PPPXXPXAPXXXGGXXVSPPPX---GGPXXPPXPGXXPGXXFXPQGXRP 663
PPP P PPP GGP PP P G P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 6/53 (11%)
Frame = +1
Query: 460 SPPXXPP------PPPGXXXXXXGXPXLPPPXXPXAPXXXGGXXVSPPPXGGP 600
SPP PP P P P + P P P G PPP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect(2) = 0.015
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 463 PPXXPPPPPGXXXXXXGXPXLPPPXXPXAPXXXGGXXVSPPPXGGPXXPPXP 618
P PPPPP LP P G PPP P PP P
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNV--NNLGSQVNIPPPPATPSQPPRP 285
Score = 23.4 bits (48), Expect(2) = 0.015
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 460 SPPXXPPPPP 489
+PP PPPPP
Sbjct: 188 NPPPPPPPPP 197
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 34.7 bits (76), Expect = 0.018
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = -1
Query: 912 PXPPXGGKGGXGXPGXRXGXGXRGGEGGGXXXG 814
P G +GG G G R G G RGG GGG G
Sbjct: 443 PRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -1
Query: 885 GXGXPGXRXGXGXRGGEGGGXXXGGXAXGXLXGPXGGGP 769
G G G R G G RGG GG GG G G P
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNP 484
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 864 RXGXGXRGGEGGGXXXGGXAXGXLXGPXGGGPPXXXGG 751
R G G RGG GG GG G GGG GG
Sbjct: 444 RTGGGSRGGRGGFGGRGGFGG---RGGFGGGRGRGRGG 478
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.024
Identities = 24/55 (43%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -1
Query: 912 PXPPXGGKGGXGXPGXRXGX-GXRGGEGGGXXXGGXAXGXLXGPXGGGPPXXXGG 751
P P GG GG G G G GG GGG GG G G GGGP GG
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGGG--PGGFEGG--PGGFGGGPGGFGGG 250
Score = 33.9 bits (74), Expect = 0.032
Identities = 24/55 (43%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Frame = -1
Query: 897 GGKGGXGX-PGXRXGXGXRGGE----GGGXXXGGXAXGXLXGPXG-GGPPXXXGG 751
GG GG PG G G GGE GG GG G GP G GG P GG
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG 249
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = -1
Query: 894 GKGGXGXPGXRXGXGXRGGEGGGXXXGGXAXGXLXGPXG--GGPPXXXGG 751
G G G P G G GG GG G G GP G GGP GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 29.5 bits (63), Expect = 0.69
Identities = 20/46 (43%), Positives = 21/46 (45%)
Frame = -1
Query: 903 PXGGKGGXGXPGXRXGXGXRGGEGGGXXXGGXAXGXLXGPXGGGPP 766
P G +GG G G G G GG GG GG G GP G G P
Sbjct: 230 PGGFEGGPGGFGGGPG-GFGGGLGG---FGGGPGGFGGGPGGHGGP 271
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 551 GAXGXXGGGRXGXPKXXXXXPGGGGGXXGG 462
G G GG G P PGG GG GG
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Score = 25.8 bits (54), Expect = 8.5
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -2
Query: 863 GXGXGTXXAKGGGXXRGXXPXGFCXAPGGVGPPXXXXGXXFWEV*XGGGGXG 708
G G GG G P GF PGG G G G GG G
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.043
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFP 895
P PP P P PPPS P P P P P PP P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP--PMPAGPPSAPPPPLP 1736
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 463 PPXXPPPPPGXXXXXXGXPXLPPPXXP 543
PP PPPP G P PPP P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.52
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Frame = +2
Query: 767 GGPPPXGPXKXPXAXPPXXXPP----PSPPRXPXPXRXPGXPXPPFPPXG 904
GG P P P P PP P+PP P P P P P P G
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPP--PPPMSVPPPPSAPPMPAG 1726
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPG 874
PP PPP P A PP PPP P PG
Sbjct: 1708 PPPPMSVPPPPSAPPMP-AGPPSAPPPPLPASSAPSVPNPG 1747
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 773 PPPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXP 886
PPP P A P PP +PP P P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 776 PPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFPP 898
PP P PPP P P P P P P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP--PMPAGPP 1728
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.5 bits (73), Expect = 0.043
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 897 GGKGGXGXPGXRXGXGXRGGEGGGXXXGGXAXGXLXGPXGG 775
GG+GG G G RGG GG G + G G GG
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 32.7 bits (71), Expect = 0.074
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -1
Query: 897 GGKGGXGXPGXRXGXGXRGGEGGGXXXGGXAXGXLXGPXGG 775
GG+GG G G RGG GG G A G G GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -1
Query: 873 PGXRXGXGX-RGGEGGGXXXGGXAXGXLXGPXGGGPPXXXGG 751
PG R G G RGG GG G G G GGG GG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
Score = 30.3 bits (65), Expect = 0.40
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -1
Query: 897 GGKGGXGXP-GXRXGX-GXRGGEGGGXXXGGXAXGXLXGPXGG 775
G +GG G G R G G RGG GGG GG G G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGG--RGGARGGGRGGARGG 46
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 897 GGKGGXGXPGXRXGXGXRGGEGGGXXXGGXAXGXLXGPXGG 775
GG+GG G G G GGG G G GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 32.3 bits (70), Expect = 0.098
Identities = 23/53 (43%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -1
Query: 897 GGKGGX--GXPGXRXGXGX--RGGEGGGXXXGGXAXGXLXGPXGGGPPXXXGG 751
GG+GG G G R G G RGG GGG GG G G GG GG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGG-SRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 30.3 bits (65), Expect = 0.40
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 8/62 (12%)
Frame = -1
Query: 912 PXPPXGGKGGXGXPGXRXGX-----GXRGGEGG---GXXXGGXAXGXLXGPXGGGPPXXX 757
P P G + G G R G G RGG GG G GG G G GG
Sbjct: 124 PKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFR 183
Query: 756 GG 751
GG
Sbjct: 184 GG 185
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXXPPPSPP--RXPXPXRXPGXPXPPFPP 898
PP P P + P + PP PP P P P + P P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 30.3 bits (65), Expect = 0.40
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXXPPPSPPRXP--XPXRXPGXP--XPPFPP 898
PP PP P K P P PPP+ P P P P P PP PP
Sbjct: 151 PPSPASAPPI--PSKAPPI--PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Frame = +2
Query: 752 PPXXXGGPP---PXGPXKXPXAXPPXXXP-PPSPPRXPXP 859
PP PP P P K P + P PP PP+ P P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 3/55 (5%)
Frame = +2
Query: 752 PPXXXGGP---PPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFPPXGG 907
PP P PP P P A PP P PP P F P G
Sbjct: 173 PPAQPAAPVKSPPSAP-SLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAG 226
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKX--PXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFPP 898
P PP P P P PP PP P P PP PP
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 30.3 bits (65), Expect = 0.40
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +1
Query: 460 SPPXXPPPP--PGXXXXXXGXPXLPPPXX-PXAPXXXGGXXVSPPPXGGPXXP-PXPGXX 627
+PP P P G P +PPP P P G PPP P P P G
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Query: 628 P 630
P
Sbjct: 1228 P 1228
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Frame = +2
Query: 755 PXXXGGPPPXGPXKX--PXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFP 895
P G PP P P P PP PP P P PP P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Frame = +2
Query: 773 PPPXGPXKXPXAXPPXXXPPPSP-PRXPXPXRXPGXPXPPFPPXGG 907
PP P P P PP P P P P PP P G
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 773 PPPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPP-FPP 898
P P P A PP P P P P P P P PP
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKX-PXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFP-PXGG 907
P G PP P P PP PP P P P PP P P G
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Frame = +1
Query: 463 PPXXPPPP-PGXXXXXXGXPXLPPPXX-PXAPXXXGGXXVSPPPXGGPXXPPXPGXXPGX 636
PP PP P G P +PPP P P G P P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Query: 637 XFXPQGXRP 663
P+ P
Sbjct: 1249 VSTPRSSVP 1257
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 6/50 (12%)
Frame = +2
Query: 755 PXXXGGPPPXGPXKXPXAXPPXXXPPPSP------PRXPXPXRXPGXPXP 886
P G PP P P P PP P P P P P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/51 (29%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXXPP--PSPPRXPXPXRXPGXPXPPFPP 898
P PP P P P P P+P P P PP PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXP 886
P G P P P + P P P P P P P P
Sbjct: 1053 PKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Frame = +2
Query: 755 PXXXGGPPPXGPX--KXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFPPXGG 907
P G PP P P P PP P P P PP P G
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = +2
Query: 755 PXXXGGPPPXGPX--KXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFP-PXGG 907
P G PP P P P P P P P P PP P P G
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +2
Query: 752 PPXXXGGPPPXGPXKXPXAXPPXXX-PPPSPPRXPXPXRXPGXPXPPFP 895
PP P P P PP P P+P P P PP P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/52 (28%), Positives = 15/52 (28%), Gaps = 1/52 (1%)
Frame = +2
Query: 755 PXXXGGPPPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFP-PXGG 907
P P P P P PP P P P PP P P G
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG 1177
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/45 (26%), Positives = 13/45 (28%)
Frame = +2
Query: 773 PPPXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFPPXGG 907
P P P + PP P P P P P P G
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +1
Query: 463 PPXXPPPPPGXXXXXXGXPXLPPPXXPXAPXXXGGXXVSPPPXGGPXXPPXPGXXP 630
P P P G P PPP P P P G P P G P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPP----VPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/46 (30%), Positives = 14/46 (30%), Gaps = 1/46 (2%)
Frame = +2
Query: 773 PPPXGPXKXPXAXPPXXXPP-PSPPRXPXPXRXPGXPXPPFPPXGG 907
P P P P PP P P P P PP P G
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 767 GGPPPXGPXKXPXAXPPXXXPPPSPP 844
G PPP P P PP PPP PP
Sbjct: 7 GNPPP--PPPPPGFEPPSQPPPPPPP 30
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 812 PPXXXPPPSPPRXPXPXRXPGXPXPPFPP 898
PP PPP PP P P P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEP---PSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 800 PXAXPPXXXPPPSPPRXPXPXRXPGXPXPPF 892
P PP PPP PP P + P P P +
Sbjct: 5 PPGNPP---PPPPPPGFEPPSQPPPPPPPGY 32
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 463 PPXXPPPPPGXXXXXXGXPXLPPPXXP 543
PP PPPPP P PPP P
Sbjct: 5 PPGNPPPPP--PPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 466 PXXPPPPPGXXXXXXGXPXLPP 531
P PPPPPG P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 460 SPPXXPPPPPGXXXXXXGXPXLPPPXXPXAPXXXGGXXVSPPPXGGPXXPP 612
S P P PP P LP AP G ++P P G PP
Sbjct: 250 SVPRLPHDPPDLEGDD-NIPDLPKRPASIAPQPTGASTIAPQPTGTSPSPP 299
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +2
Query: 773 PPPXGPXKXPXAXPPXXXPPPS-PPRXP--XPXRXPGXPXPPFP 895
PPP P P A PP P + PP P G P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAP 1925
Score = 25.8 bits (54), Expect = 8.5
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 475 PPPPPGXXXXXXGXP-XLPPPXXPXAPXXXGGXXVSPPPXGGPXXPPXPG 621
PPPPP G P P P A G +S P G P P G
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNP-GMPAPVPLTG 1930
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 4.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 463 PPXXPPPPP 489
PP PPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 21.8 bits (44), Expect(2) = 4.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 526 PPPXXPXAPXXXGGXXVSP 582
PPP P GG VSP
Sbjct: 947 PPPPPPPLVSAAGGKFVSP 965
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +2
Query: 779 PXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFPP 898
P P + P P PP P P P PP P
Sbjct: 557 PSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +2
Query: 779 PXGPXKXPXAXPPXXXPPPSPPRXPXPXRXPGXPXPPFPP 898
P P + P P PP P P P PP P
Sbjct: 647 PSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +2
Query: 770 GPPPXGPXKXPXAXPPXXXPPPSPPRXPXPX--RXPGXPXPPFPPXGG 907
GPPP A P +P P R G P+PP GG
Sbjct: 61 GPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPYPPQGG 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,067,427
Number of Sequences: 5004
Number of extensions: 29224
Number of successful extensions: 370
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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