Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_B05
         (893 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0D6X0 Cluster: Os07g0429600 protein; n=6; Oryza sativa...    35   3.2  
UniRef50_A6BKE6 Cluster: Putative uncharacterized protein; n=2; ...    34   5.6  
UniRef50_A0BRD7 Cluster: Chromosome undetermined scaffold_122, w...    34   5.6  
UniRef50_UPI00006CE5B7 Cluster: hypothetical protein TTHERM_0014...    33   9.8  
UniRef50_A7GHJ0 Cluster: Putative uncharacterized protein; n=3; ...    33   9.8  

>UniRef50_Q0D6X0 Cluster: Os07g0429600 protein; n=6; Oryza
           sativa|Rep: Os07g0429600 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 107

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 571 SRTLAGCGYCPSENGKTVCVGCYSGRRTSI*CAS*TSFPLLAA 443
           S T A CG C S   K  CVGC +   ++  C +   FP + A
Sbjct: 24  SATAAQCGCCISSRAKACCVGCIAAGGSNSVCKNTCRFPCILA 66


>UniRef50_A6BKE6 Cluster: Putative uncharacterized protein; n=2;
           Clostridiales|Rep: Putative uncharacterized protein -
           Dorea longicatena DSM 13814
          Length = 442

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 316 YTWVNHTVLMLLFQIFWKVSQISDYLKGRSVEKPKNELQL 435
           YTWVN    +L   + + V+ I DY +G  V KP+    L
Sbjct: 337 YTWVNELCQVLSENVDYAVNHIRDYYRGIEVSKPQGTYML 376


>UniRef50_A0BRD7 Cluster: Chromosome undetermined scaffold_122,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_122,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 679

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +1

Query: 241 LMSEFTKSEWKKVSEGGAMETCHKLYTWVNHTVLMLLFQIFWKVSQISDYLKGRSVEKPK 420
           L   F ++ W+KV +   +   H++   ++H   +  F  +WK   I+ YL+ + V+K  
Sbjct: 164 LSPTFNENSWQKVDKVNRINLAHEVQKEIHH---LERFNTYWKPDMINQYLQLKIVQKGV 220

Query: 421 N 423
           N
Sbjct: 221 N 221


>UniRef50_UPI00006CE5B7 Cluster: hypothetical protein
           TTHERM_00145690; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00145690 - Tetrahymena
           thermophila SB210
          Length = 1683

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
 Frame = +1

Query: 259 KSEWKKVSEGGAMETCHKLYTWVNHTVLMLLFQIFWKVSQISDYLKGRSVEKPKNELQLT 438
           KS   K+ EG   E+   +      T       +    +  + YL   S++KPKN +  T
Sbjct: 655 KSPHNKIEEGFDCESQKDISIEAQRTKCDSQGDLIQYENNRTSYLSQPSIQKPKNSIA-T 713

Query: 439 FSPLTKEMKFKRHIRSMSDVQNS----TPHRLSYRSRRGSN 549
              L K+  ++   + MS   NS    TP R SY+S    N
Sbjct: 714 VVNLNKQQSYEN--KGMSATHNSYLNDTPSRQSYKSSNSQN 752


>UniRef50_A7GHJ0 Cluster: Putative uncharacterized protein; n=3;
           Clostridium botulinum|Rep: Putative uncharacterized
           protein - Clostridium botulinum (strain Langeland / NCTC
           10281 / Type F)
          Length = 196

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 287 PSLTFFHSLFVNSLISPDRIPIPVARSTNLNKTVQN 180
           P +T FH LFV ++I P ++PI V   +  +K + N
Sbjct: 93  PEITIFHILFVFAMIDPIKLPIGVIPISTPSKKIDN 128


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 866,640,352
Number of Sequences: 1657284
Number of extensions: 17695752
Number of successful extensions: 43083
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43066
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)