Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_B03
         (889 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -2

Query: 888 GXXPGGGDXXXGXXGGXPLPXGGXGG 811
           G  PGGG    G   G P P GG GG
Sbjct: 209 GGAPGGG----GGSSGGPGPGGGGGG 230



 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -2

Query: 825 GGXGGXXSGXXXGGXXGGPXRXFXGGNPG 739
           GG GG   G   GG  GGP     GG  G
Sbjct: 205 GGSGGGAPGGG-GGSSGGPGPGGGGGGGG 232


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -2

Query: 486 GGGRXXGPKTXPPXPXGXGXFXXGGG 409
           GGGR  G K     P G G    GGG
Sbjct: 513 GGGRAEGDKVTFQIPNGGGGGGGGGG 538


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/48 (25%), Positives = 15/48 (31%)
 Frame = +1

Query: 739 PXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXGG 882
           P +P  + PP  P  P    P       P G       P   +   GG
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGG 621


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.151    0.535 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,433
Number of Sequences: 2352
Number of extensions: 7359
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)