Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_B03
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 38 0.013
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.068
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.068
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.068
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 34 0.16
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.21
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.27
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.27
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.36
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.36
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 33 0.36
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 33 0.36
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.48
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.48
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 32 0.63
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 32 0.63
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 31 0.83
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 31 1.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.5
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 1.5
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.5
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 1.5
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 31 1.5
Z82064-2|CAI79180.1| 167|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 30 1.9
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 30 1.9
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 30 1.9
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 1.9
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 30 2.5
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.4
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 3.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.4
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 3.4
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 3.4
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 3.4
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 3.4
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 3.4
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 3.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.4
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 4.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 4.4
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 29 4.4
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 29 4.4
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 5.9
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 5.9
AL023838-8|CAL36503.1| 79|Caenorhabditis elegans Hypothetical ... 29 5.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.9
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 7.8
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 7.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 7.8
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 7.8
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 7.8
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 28 7.8
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = -1
Query: 574 PXFXGXPXXPLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXP- 398
P G P P GGG P GP P G G + P PG GG P
Sbjct: 166 PGSDGQPGRPATGGGAA-PRPGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGGGVGAPG 224
Query: 397 PPGP 386
P GP
Sbjct: 225 PAGP 228
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = -1
Query: 574 PXFXGXPXXPLXGG-GXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXP 398
P G P P GG G P PGG G P G GG P
Sbjct: 124 PGAWGMPGNPGKGGSGPCHPVVPTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAP 183
Query: 397 PPGP 386
PGP
Sbjct: 184 RPGP 187
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.068
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 393 GGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXX 572
GG PP P P G P P PPPG P G PPP G G P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPG--GLPPIS 755
Query: 573 GKTP 584
G P
Sbjct: 756 GGPP 759
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 709 GGXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXG-KGGPXXXP 855
GG PPP +PP P P P P P P G KGGP P
Sbjct: 740 GGPPPP-PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Frame = +1
Query: 712 GXPPPXXKKPXV---PPXKXPPGXPXXPTXXXPXXXXPXS-PXGKGGPXXXPXXXVXPXG 879
G PPP P + PP PPG T P P P GGP P P G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP----PPPG 766
Query: 880 GXP 888
G P
Sbjct: 767 GCP 769
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 393 GGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRG 548
GG PP P GG P PPP P G PPP G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +1
Query: 712 GXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXG 879
G PPP +PP P P P P P P G P P G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 432 PXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRG 548
P PGG P P PPPG P G PPP G
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISG--GPPPPPPPPG 766
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 390 PGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPP 536
P GG PP P PGG P P PPPG P PP
Sbjct: 764 PPGGCPPPPPP---PPPGGFKGG---PPPPPPPGMFAPMAPVIPDYLPP 806
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.068
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 393 GGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXX 572
GG PP P P G P P PPPG P G PPP G G P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPG--GLPPIS 755
Query: 573 GKTP 584
G P
Sbjct: 756 GGPP 759
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 709 GGXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXG-KGGPXXXP 855
GG PPP +PP P P P P P P G KGGP P
Sbjct: 740 GGPPPP-PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Frame = +1
Query: 712 GXPPPXXKKPXV---PPXKXPPGXPXXPTXXXPXXXXPXS-PXGKGGPXXXPXXXVXPXG 879
G PPP P + PP PPG T P P P GGP P P G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP----PPPG 766
Query: 880 GXP 888
G P
Sbjct: 767 GCP 769
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 393 GGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRG 548
GG PP P GG P PPP P G PPP G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +1
Query: 712 GXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXG 879
G PPP +PP P P P P P P G P P G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 432 PXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRG 548
P PGG P P PPPG P G PPP G
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISG--GPPPPPPPPG 766
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 390 PGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPP 536
P GG PP P PGG P P PPPG P PP
Sbjct: 764 PPGGCPPPPPP---PPPGGFKGG---PPPPPPPGMFAPMAPVIPDYLPP 806
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.068
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 393 GGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXX 572
GG PP P P G P P PPPG P G PPP G G P
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPG--GLPPIS 338
Query: 573 GKTP 584
G P
Sbjct: 339 GGPP 342
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 709 GGXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXG-KGGPXXXP 855
GG PPP +PP P P P P P P G KGGP P
Sbjct: 323 GGPPPP-PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Frame = +1
Query: 712 GXPPPXXKKPXV---PPXKXPPGXPXXPTXXXPXXXXPXS-PXGKGGPXXXPXXXVXPXG 879
G PPP P + PP PPG T P P P GGP P P G
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP----PPPG 349
Query: 880 GXP 888
G P
Sbjct: 350 GCP 352
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 393 GGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRG 548
GG PP P GG P PPP P G PPP G
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +1
Query: 712 GXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXG 879
G PPP +PP P P P P P P G P P G
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 432 PXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRG 548
P PGG P P PPPG P G PPP G
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISG--GPPPPPPPPG 349
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 390 PGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPP 536
P GG PP P PGG P P PPPG P PP
Sbjct: 347 PPGGCPPPPPP---PPPGGFKGG---PPPPPPPGMFAPMAPVIPDYLPP 389
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = -1
Query: 574 PXFXGXPXXPLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXP- 398
P G P P GGG P G P G G + P PG GG+ P
Sbjct: 202 PGNDGQPGAPSFGGGVGAP-----GAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPG 256
Query: 397 PPGP 386
PPGP
Sbjct: 257 PPGP 260
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.21
Identities = 26/77 (33%), Positives = 26/77 (33%), Gaps = 1/77 (1%)
Frame = +3
Query: 357 PXPXXXFXXXGPGG-GXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXP 533
P P GPGG G PP PG G P F PP GP G P
Sbjct: 392 PPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGP-----GAYGP 446
Query: 534 PPXRGXXGFPXXXGKTP 584
PP GFP P
Sbjct: 447 PP----TGFPPVGAPPP 459
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +1
Query: 709 GGXPPPXXKKPX---VPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGP 843
GG PPP P PP PPG P P P G G P
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPP 412
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +3
Query: 390 PGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXX 569
P G PP K P G G P PPP P G PPP P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGS------PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Query: 570 XGKTPKKTXXXKXPXXPK 623
P + P P+
Sbjct: 287 GSPPPPRAGSPPPPPPPR 304
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 547 PLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGP 386
PL G G P P P G P PP G A PPP P
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +1
Query: 709 GGXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXGGXP 888
G PPP P PP PP P + P P P G GG P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/101 (25%), Positives = 28/101 (27%)
Frame = +1
Query: 532 PPPKGGXXXSPKXGXKPQKKXXXKRXPXXXKP*XGPXPGXFXXXXXXXXXXXXXXXXXXG 711
PPP G P G P + P P P G G
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSP--PPPPPPRGSPPTGSLPPPQAGGSPPPAGT----G 327
Query: 712 GXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGK 834
PPP +K P P G P PT P P GK
Sbjct: 328 SPPPPPRQKRQAPERSPPTGSP--PTGSPPTGRPPRGGPGK 366
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 718 PPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXGGXP 888
PPP P P PP P P P P P P P G P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 709 GGXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXP 855
G PPP P PP P G P + P P G G P P
Sbjct: 287 GSPPPPRAGSP--PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +3
Query: 393 GGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXX 572
G G PP P P G P PPP G PPP G P
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
Query: 573 GKTPKKTXXXKXP 611
P + P
Sbjct: 311 SLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +3
Query: 390 PGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXX 569
P G PP K P G G P PPP P G PPP P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGS------PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Query: 570 XGKTPKKTXXXKXPXXPK 623
P + P P+
Sbjct: 308 GSPPPPRAGSPPPPPPPR 325
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 547 PLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGP 386
PL G G P P P G P PP G A PPP P
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +1
Query: 709 GGXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXGGXP 888
G PPP P PP PP P + P P P G GG P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/101 (25%), Positives = 28/101 (27%)
Frame = +1
Query: 532 PPPKGGXXXSPKXGXKPQKKXXXKRXPXXXKP*XGPXPGXFXXXXXXXXXXXXXXXXXXG 711
PPP G P G P + P P P G G
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSP--PPPPPPRGSPPTGSLPPPQAGGSPPPAGT----G 348
Query: 712 GXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGK 834
PPP +K P P G P PT P P GK
Sbjct: 349 SPPPPPRQKRQAPERSPPTGSP--PTGSPPTGRPPRGGPGK 387
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 718 PPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXGGXP 888
PPP P P PP P P P P P P P G P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 709 GGXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXP 855
G PPP P PP P G P + P P G G P P
Sbjct: 308 GSPPPPRAGSP--PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +3
Query: 393 GGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXX 572
G G PP P P G P PPP G PPP G P
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
Query: 573 GKTPKKTXXXKXP 611
P + P
Sbjct: 332 SLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +3
Query: 390 PGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXX 569
P G PP K P G G P PPP P G PPP P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGS------PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Query: 570 XGKTPKKTXXXKXPXXPK 623
P + P P+
Sbjct: 293 GSPPPPRAGSPPPPPPPR 310
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 547 PLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGP 386
PL G G P P P G P PP G A PPP P
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +1
Query: 709 GGXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXGGXP 888
G PPP P PP PP P + P P P G GG P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/101 (25%), Positives = 28/101 (27%)
Frame = +1
Query: 532 PPPKGGXXXSPKXGXKPQKKXXXKRXPXXXKP*XGPXPGXFXXXXXXXXXXXXXXXXXXG 711
PPP G P G P + P P P G G
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSP--PPPPPPRGSPPTGSLPPPQAGGSPPPAGT----G 333
Query: 712 GXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGK 834
PPP +K P P G P PT P P GK
Sbjct: 334 SPPPPPRQKRQAPERSPPTGSP--PTGSPPTGRPPRGGPGK 372
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 718 PPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXGGXP 888
PPP P P PP P P P P P P P G P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 709 GGXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXP 855
G PPP P PP P G P + P P G G P P
Sbjct: 293 GSPPPPRAGSP--PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +3
Query: 393 GGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXX 572
G G PP P P G P PPP G PPP G P
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
Query: 573 GKTPKKTXXXKXP 611
P + P
Sbjct: 317 SLPPPQAGGSPPP 329
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 33.1 bits (72), Expect = 0.27
Identities = 27/98 (27%), Positives = 30/98 (30%), Gaps = 5/98 (5%)
Frame = +3
Query: 300 NXGXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKXPXPGGXGXXFL----X 467
N G G G P P P GP G P + PG G +
Sbjct: 191 NAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGG 250
Query: 468 PXPFPPPGXXG-PXXXXXGXXXPPPXRGXXGFPXXXGK 578
P P PPG G P G P G G P G+
Sbjct: 251 PGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQ 288
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/99 (27%), Positives = 30/99 (30%), Gaps = 3/99 (3%)
Frame = +3
Query: 306 GXXGXNGTPKNXXKKXXPXPXXXFXXXGPGG-GXXAPPXXKKXPXPGGXGXXFLXPXPFP 482
G G +G P + P PGG G PP P G G P P
Sbjct: 220 GPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSGGA-AQPGPPG 278
Query: 483 PPGXXGPXXXXXGXXXP--PPXRGXXGFPXXXGKTPKKT 593
PPG G G P P G G P +T
Sbjct: 279 PPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPRT 317
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 718 PPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGP 843
PP +P P PG P T P P P G GP
Sbjct: 221 PPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGP 262
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 32.7 bits (71), Expect = 0.36
Identities = 28/93 (30%), Positives = 30/93 (32%), Gaps = 1/93 (1%)
Frame = +3
Query: 300 NXGXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKXPXPGGXGXXFLXPX-P 476
N G G G+P P P GP G AP + PG P P
Sbjct: 123 NPGADGDAGSPGEAGGAGPPGPP------GPDGNPGAPGNDGEAGSPGTRSISSPGPAGP 176
Query: 477 FPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXXG 575
PPG GP G P P G G P G
Sbjct: 177 AGPPGPPGPDGAPGGGSGPGP-AGPAGPPGPDG 208
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 32.7 bits (71), Expect = 0.36
Identities = 27/97 (27%), Positives = 28/97 (28%), Gaps = 4/97 (4%)
Frame = +3
Query: 300 NXGXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKXPXPGGXGXXFLX---- 467
N G G +G P P GP G P PG G
Sbjct: 125 NAGPEGPSGAPGADGDAAGPGEAGPAGPAGPPGPDGQPGAPGPNGQPGAAGTTSTNEPGS 184
Query: 468 PXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXXGK 578
P P PPG GP PP G G P GK
Sbjct: 185 PGPAGPPGPAGPAGEDAAAPESPP--GPPGPPGPPGK 219
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 32.7 bits (71), Expect = 0.36
Identities = 28/93 (30%), Positives = 30/93 (32%), Gaps = 1/93 (1%)
Frame = +3
Query: 300 NXGXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKXPXPGGXGXXFLXPX-P 476
N G G G+P P P GP G AP + PG P P
Sbjct: 123 NPGADGDAGSPGEAGGAGPPGPP------GPDGNPGAPGNDGEAGSPGTRSISSPGPAGP 176
Query: 477 FPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXXG 575
PPG GP G P P G G P G
Sbjct: 177 AGPPGPPGPDGAPGGGSGPGP-AGPAGPPGPDG 208
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +1
Query: 721 PPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXS--PXGKGG 840
PP P PP + PPG P PT P P + P G G
Sbjct: 243 PPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPPGHQG 284
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 712 GXPPPXXKKPXVPPXKXPPGXPXXPTXXXP 801
G P P PP + PPG P PT P
Sbjct: 251 GPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +1
Query: 709 GGXPPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXS--PXGKGGP 843
G P P PP PPG P PT P P + P G GP
Sbjct: 230 GPVDPSDEPSPSDPPG--PPGPPGPPTRRPPGPPGPPTRRPPGPPGP 274
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +3
Query: 387 GPGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPP 539
G GGG P P PGG G F+ P P PPP G PPP
Sbjct: 652 GSGGGSSMP---MPVPPPGGLGG-FMPPPP-PPPPMPGDLSSLLAAAPPPP 697
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = -2
Query: 876 GGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPGF 736
GGG GG P GG GG G G GG + GG GF
Sbjct: 514 GGGISAMTGAGGEA-PGGGAGGRGGGAHGGAGRGGGYQGGRGGGRGF 559
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +3
Query: 387 GPGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPP 539
G GGG P P PGG G F+ P P PPP G PPP
Sbjct: 652 GSGGGSSMP---MPVPPPGGLGG-FMPPPP-PPPPMPGDLSSLLAAAPPPP 697
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = -2
Query: 876 GGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPGF 736
GGG GG P GG GG G G GG + GG GF
Sbjct: 514 GGGISAMTGAGGEA-PGGGAGGRGGGAHGGAGRGGGYQGGRGGGRGF 559
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = +1
Query: 718 PPPXX---KKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXGGXP 888
PPP P PP PG P P P P G GG P + GG P
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = +3
Query: 411 PPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXXGKTPKK 590
PP P P + P P PPP P PPP G P G P
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 591 TXXXKXP 611
+ P
Sbjct: 338 PPGMRYP 344
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = +1
Query: 718 PPPXX---KKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXPXXXVXPXGGXP 888
PPP P PP PG P P P P G GG P + GG P
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = +3
Query: 411 PPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXXGKTPKK 590
PP P P + P P PPP P PPP G P G P
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 591 TXXXKXP 611
+ P
Sbjct: 348 PPGMRYP 354
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 888 GXXPGGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPG 739
G GGG G P GG GG G GG GG GG G
Sbjct: 183 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQG 232
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 31.9 bits (69), Expect = 0.63
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -2
Query: 888 GXXPGGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPG 739
G GGG G P GG GG G GG GG GG G
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQG 270
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.83
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = -1
Query: 574 PXFXGXPXXPLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXP- 398
P F G P P G + GP P G +G P PG GA P
Sbjct: 211 PGFDGKPGNP---GNNGVRVRRIPGPPGPRGAEGDSGVQGGPGSPGLAGAPGDSGAPGPQ 267
Query: 397 -PPG 389
PPG
Sbjct: 268 GPPG 271
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -2
Query: 549 PPFXGGXXXXPXXXXGAPGXRGGGRXXGPKTXPPXPXGXGXFXXGG-GXP 403
PP GG GAPG G G P P G G + GG G P
Sbjct: 286 PPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMP 335
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -1
Query: 547 PLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGPXXXXXX 368
PL GGG P GG G G P G G GG PPPG
Sbjct: 156 PLMGGGGDPRGP----PGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGP 211
Query: 367 XGXG 356
G G
Sbjct: 212 GGPG 215
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 873 GGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGP 769
GG G GG P GG GG G G GGP
Sbjct: 181 GGPPGHGGQGGPP-GHGGMGGPPPGQGGPGGPGGP 214
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -1
Query: 547 PLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGPXXXXXX 368
PL GGG P GG G G P G G GG PPPG
Sbjct: 436 PLMGGGGDPRGP----PGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGP 491
Query: 367 XGXG 356
G G
Sbjct: 492 GGPG 495
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 873 GGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGP 769
GG G GG P GG GG G G GGP
Sbjct: 461 GGPPGHGGQGGPP-GHGGMGGPPPGQGGPGGPGGP 494
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/94 (29%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Frame = +3
Query: 306 GXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAP--PXXKKXPXPGGXGXXFLXPXPF 479
G G +G P + P P GP G AP P P G P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPG-EPGPA 223
Query: 480 PPPGXXGP--XXXXXGXXXPPPXRGXXGFPXXXG 575
PPG GP G P P G G P G
Sbjct: 224 GPPGPAGPAGNDGAPGTGGPGP-AGPKGPPGAAG 256
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = +3
Query: 300 NXGXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKX--PXPGGXGXXFLXPX 473
N G G G+P K P G G P + P PGG
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAG 162
Query: 474 PFPPPGXXGPXXXXXGXXXPPP 539
P PPG G G P P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGP 184
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 562 GXPXXPLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGP 386
G P P G P P P G G G PPG GA P GP
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG----PPGPAGPAGNDGAPGAPGGP 206
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = -2
Query: 888 GXXPGGGDXXXGXXGGX---PLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPGFFXXXGG 718
G GGG G GG P P GG G G GG G GG G GG
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Query: 717 XXPXG 703
G
Sbjct: 116 GCGGG 120
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = -2
Query: 888 GXXPGGGDXXXGXXGGXPLPXG-GXGGXXSGXXXGGXXGGPXRXFXGGNPGFFXXXGG 718
G GGG G P P G G GG G GG P GG G GG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGG 92
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -2
Query: 537 GGXXXXPXXXXGAPGXRGGG-RXXGPKTXPPXPXGXGXFXXGGG 409
GG P G G GGG G PP P G G GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 546 PFXGGXXXXPXXXXGAPGXRGGGRXXGPKTXPPXPXGXGXFXXGGG 409
P GG G G GGG P PP P G G GGG
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAP---PPAPCGGGCGGGGGG 65
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = -2
Query: 888 GXXPGGGDXXXGXXGGX---PLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPGFFXXXGG 718
G GGG G GG P P GG G G GG G GG G GG
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 115
Query: 717 XXPXG 703
G
Sbjct: 116 GCGGG 120
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = -2
Query: 888 GXXPGGGDXXXGXXGGXPLPXG-GXGGXXSGXXXGGXXGGPXRXFXGGNPGFFXXXGG 718
G GGG G P P G G GG G GG P GG G GG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGG 92
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -2
Query: 537 GGXXXXPXXXXGAPGXRGGG-RXXGPKTXPPXPXGXGXFXXGGG 409
GG P G G GGG G PP P G G GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 546 PFXGGXXXXPXXXXGAPGXRGGGRXXGPKTXPPXPXGXGXFXXGGG 409
P GG G G GGG P PP P G G GGG
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAP---PPAPCGGGCGGGGGG 65
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/94 (29%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Frame = +3
Query: 306 GXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAP--PXXKKXPXPGGXGXXFLXPXPF 479
G G +G P + P P GP G AP P P G P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPG-EPGPA 223
Query: 480 PPPGXXGP--XXXXXGXXXPPPXRGXXGFPXXXG 575
PPG GP G P P G G P G
Sbjct: 224 GPPGPAGPAGNDGAPGTGGPGP-AGPKGPPGAAG 256
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = +3
Query: 300 NXGXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKX--PXPGGXGXXFLXPX 473
N G G G+P K P G G P + P PGG
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAG 162
Query: 474 PFPPPGXXGPXXXXXGXXXPPP 539
P PPG G G P P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGP 184
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 562 GXPXXPLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGP 386
G P P G P P P G G G PPG GA P GP
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG----PPGPAGPAGNDGAPGAPGGP 206
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.7 bits (66), Expect = 1.5
Identities = 34/125 (27%), Positives = 36/125 (28%), Gaps = 7/125 (5%)
Frame = +1
Query: 535 PPKGGXXXS-PKXGXKPQKKXXXKRXPXXXKP*XGPXPGXFXXXXXXXXXXXXXXXXXXG 711
PP GG G P P +P GP PG F G
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGP-PGPFNPSGAPPSGGPPGPFDPSG 339
Query: 712 GXP---PPXXKKP-XVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGG--PXXXPXXXVXP 873
P PP P PP PPG P P+ P P P G P P P
Sbjct: 340 APPSGGPPGPFNPSGAPPSGGPPG-PFDPS-GAPPSGGPPGPFDPSGAPPSGGPPGPFDP 397
Query: 874 XGGXP 888
G P
Sbjct: 398 SGAPP 402
Score = 30.3 bits (65), Expect = 1.9
Identities = 34/125 (27%), Positives = 35/125 (28%), Gaps = 7/125 (5%)
Frame = +1
Query: 535 PPKGGXXXS-PKXGXKPQKKXXXKRXPXXXKP*XGPXPGXFXXXXXXXXXXXXXXXXXXG 711
PP GG G P P P GP PG F G
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFNPSGAPPSGGPPGPFNPSG 429
Query: 712 GXP---PPXXKKP-XVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGG--PXXXPXXXVXP 873
P PP P PP PPG P P+ P P P G P P P
Sbjct: 430 APPSGGPPGPFNPSGAPPSGGPPG-PFNPS-GAPPSGGPPGPFNPSGAPPSGGPPGPFDP 487
Query: 874 XGGXP 888
G P
Sbjct: 488 SGAPP 492
Score = 29.9 bits (64), Expect = 2.5
Identities = 34/125 (27%), Positives = 35/125 (28%), Gaps = 7/125 (5%)
Frame = +1
Query: 535 PPKGGXXXS-PKXGXKPQKKXXXKRXPXXXKP*XGPXPGXFXXXXXXXXXXXXXXXXXXG 711
PP GG G P P P GP PG F G
Sbjct: 161 PPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGP-PGPFNPSEAPPSGGPTGPFDPSG 219
Query: 712 GXP---PPXXKKP-XVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGG--PXXXPXXXVXP 873
P PP P PP PPG P P+ P P P G P P P
Sbjct: 220 APPSGGPPGPFNPSGAPPSGGPPG-PFDPS-GAPPSGGPPGPFNPSGAPPSGGPPGPFDP 277
Query: 874 XGGXP 888
G P
Sbjct: 278 SGAPP 282
Score = 29.9 bits (64), Expect = 2.5
Identities = 34/125 (27%), Positives = 35/125 (28%), Gaps = 7/125 (5%)
Frame = +1
Query: 535 PPKGGXXXS-PKXGXKPQKKXXXKRXPXXXKP*XGPXPGXFXXXXXXXXXXXXXXXXXXG 711
PP GG G P P P GP PG F G
Sbjct: 251 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFDPSGAPPSGGPPGPFDPSG 309
Query: 712 GXP---PPXXKKPX-VPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGG--PXXXPXXXVXP 873
P PP P PP PPG P P+ P P P G P P P
Sbjct: 310 AQPSGGPPGPFNPSGAPPSGGPPG-PFDPS-GAPPSGGPPGPFNPSGAPPSGGPPGPFDP 367
Query: 874 XGGXP 888
G P
Sbjct: 368 SGAPP 372
Score = 29.9 bits (64), Expect = 2.5
Identities = 34/125 (27%), Positives = 35/125 (28%), Gaps = 7/125 (5%)
Frame = +1
Query: 535 PPKGGXXXS-PKXGXKPQKKXXXKRXPXXXKP*XGPXPGXFXXXXXXXXXXXXXXXXXXG 711
PP GG G P P P GP PG F G
Sbjct: 341 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFDPSGAPPSGGPPGPFDPSG 399
Query: 712 GXP---PPXXKKPX-VPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGG--PXXXPXXXVXP 873
P PP P PP PPG P P+ P P P G P P P
Sbjct: 400 APPSGGPPGPFNPSGAPPSGGPPG-PFNPS-GAPPSGGPPGPFNPSGAPPSGGPPGPFNP 457
Query: 874 XGGXP 888
G P
Sbjct: 458 SGAPP 462
Score = 29.9 bits (64), Expect = 2.5
Identities = 34/125 (27%), Positives = 35/125 (28%), Gaps = 7/125 (5%)
Frame = +1
Query: 535 PPKGGXXXS-PKXGXKPQKKXXXKRXPXXXKP*XGPXPGXFXXXXXXXXXXXXXXXXXXG 711
PP GG G P P P GP PG F G
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP-PGPFNPSGAPPSGGPPGPFNPSG 459
Query: 712 GXP---PPXXKKP-XVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGG--PXXXPXXXVXP 873
P PP P PP PPG P P+ P P P G P P P
Sbjct: 460 APPSGGPPGPFNPSGAPPSGGPPG-PFDPS-GAPPSGGPPGPFNPSGAPPSGGPPGPFDP 517
Query: 874 XGGXP 888
G P
Sbjct: 518 SGAPP 522
Score = 28.7 bits (61), Expect = 5.9
Identities = 31/124 (25%), Positives = 32/124 (25%), Gaps = 6/124 (4%)
Frame = +1
Query: 535 PPKGGXXXSPKXGXKPQKKXXXKRXPXXXKP*XGPXPGXFXXXXXXXXXXXXXXXXXXGG 714
PP GG P P G PG F G
Sbjct: 191 PPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 250
Query: 715 XP---PPXXKKP-XVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGG--PXXXPXXXVXPX 876
P PP P PP PPG P P+ P P P G P P P
Sbjct: 251 PPSGGPPGPFNPSGAPPSGGPPG-PFDPS-GAPPSGGPPGPFDPSGAPPSGGPPGPFDPS 308
Query: 877 GGXP 888
G P
Sbjct: 309 GAQP 312
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/94 (29%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Frame = +3
Query: 306 GXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAP--PXXKKXPXPGGXGXXFLXPXPF 479
G G +G P + P P GP G AP P P G P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPG-EPGPA 223
Query: 480 PPPGXXGP--XXXXXGXXXPPPXRGXXGFPXXXG 575
PPG GP G P P G G P G
Sbjct: 224 GPPGPAGPAGNDGAPGTGGPGP-AGPKGPPGAAG 256
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = +3
Query: 300 NXGXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKX--PXPGGXGXXFLXPX 473
N G G G+P K P G G P + P PGG
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAG 162
Query: 474 PFPPPGXXGPXXXXXGXXXPPP 539
P PPG G G P P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGP 184
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 562 GXPXXPLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGP 386
G P P G P P P G G G PPG GA P GP
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG----PPGPAGPAGNDGAPGAPGGP 206
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/94 (29%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Frame = +3
Query: 306 GXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAP--PXXKKXPXPGGXGXXFLXPXPF 479
G G +G P + P P GP G AP P P G P P
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPG-EPGPA 223
Query: 480 PPPGXXGP--XXXXXGXXXPPPXRGXXGFPXXXG 575
PPG GP G P P G G P G
Sbjct: 224 GPPGPAGPAGNDGAPGTGGPGP-AGPKGPPGAAG 256
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = +3
Query: 300 NXGXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKX--PXPGGXGXXFLXPX 473
N G G G+P K P G G P + P PGG
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAG 162
Query: 474 PFPPPGXXGPXXXXXGXXXPPP 539
P PPG G G P P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGP 184
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 562 GXPXXPLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGP 386
G P P G P P P G G G PPG GA P GP
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG----PPGPAGPAGNDGAPGAPGGP 206
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 1/91 (1%)
Frame = +3
Query: 306 GXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPP 485
G G N P P G G P + P G P P P
Sbjct: 210 GTPGGNALPGPPGPPGPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPPGPPGPIGP 269
Query: 486 PGXXG-PXXXXXGXXXPPPXRGXXGFPXXXG 575
PG G P G PP G G P G
Sbjct: 270 PGQPGAPGSSQPGPQGPPGDPGIDGAPGNPG 300
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -2
Query: 561 GXXXPPFXGGXXXXPXXXXGAPGXRGGGRXXGPKTXPPXPXGXGXFXXGGGXPXXP 394
G PP G P GAPG GG GP PP P G G P P
Sbjct: 189 GPPGPPGKQGPKG-PNGEPGAPGTPGGNALPGP-PGPPGPQGPPGADGLPGNPGAP 242
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/90 (27%), Positives = 27/90 (30%), Gaps = 1/90 (1%)
Frame = +3
Query: 297 ENXGXXGXNGTPKNXXKKXXPXPXXXFXXXGPG-GGXXAPPXXKKXPXPGGXGXXFLXPX 473
+ G G G + P P PG GG PP P G P
Sbjct: 114 QGPGEPGPPGPDAELHDRILPVPPQCPCTAAPGLGGPPGPPGQDGIPGNPGRNGEDGAPG 173
Query: 474 PFPPPGXXGPXXXXXGXXXPPPXRGXXGFP 563
P P G GP G P RG G P
Sbjct: 174 PQGPSGPPGP----PGQPGQPGQRGPPGEP 199
>Z82064-2|CAI79180.1| 167|Caenorhabditis elegans Hypothetical
protein W02B9.2 protein.
Length = 167
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -2
Query: 879 PGGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPGFFXXXGGXXPXGE 700
P G D G GG GG G G GG GG GG G G GE
Sbjct: 77 PRGPDNNGGRGGGRGGDRGGDRGGDRGGDRGGDRGGDRGGDRGGRRGRGGYRDGGGGRGE 136
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = -2
Query: 519 PXXXXGAPGXRGGGRXXGP--KTXPPXPXGXGXFXXGGGXPXXP 394
P GAPG GG GP PP P G G P P
Sbjct: 190 PSGAPGAPGQSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAP 233
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = -2
Query: 519 PXXXXGAPGXRGGGRXXGP--KTXPPXPXGXGXFXXGGGXPXXP 394
P GAPG GG GP PP P G G P P
Sbjct: 189 PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAP 232
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = -2
Query: 519 PXXXXGAPGXRGGGRXXGP--KTXPPXPXGXGXFXXGGGXPXXP 394
P GAPG GG GP PP P G G P P
Sbjct: 189 PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAP 232
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 8/59 (13%)
Frame = -2
Query: 888 GXXPGGGDXXXGXXGGXPLPX-----GGXGGXXSGXXXGGXXGGPX---RXFXGGNPGF 736
G G G G GG P GG GG GG GGP R GG PGF
Sbjct: 36 GFGGGPGQFGRGGFGGGPGSNYGPGRGGFGGNGGFGGNGGFGGGPSYGGRGGFGGGPGF 94
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = -2
Query: 519 PXXXXGAPGXRGGGRXXGP--KTXPPXPXGXGXFXXGGGXPXXP 394
P GAPG GG GP PP P G G P P
Sbjct: 189 PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAP 232
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = -2
Query: 519 PXXXXGAPGXRGGGRXXGP--KTXPPXPXGXGXFXXGGGXPXXP 394
P GAPG GG GP PP P G G P P
Sbjct: 189 PSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAP 232
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -2
Query: 876 GGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPG 739
GGG G GG GG GG G GG GP GG+ G
Sbjct: 116 GGGGNNDGGWGGN---NGGGGGGRGGGGRGGDGRGPPGSNGGGDWG 158
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 876 GGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPG 739
GGG G G P G GG G GG GG GG G
Sbjct: 133 GGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGG 178
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 504 GAPGXRGGGRXXGPKTXPPXPXGXGXFXXGGG 409
G G RGGG G PP G G + GG
Sbjct: 131 GGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGG 162
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/84 (26%), Positives = 24/84 (28%)
Frame = +3
Query: 306 GXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPP 485
G G G P + P GP G P + G G P P
Sbjct: 195 GDKGSRGYPGESGEPGTPGSAGPKGNAGPAGPPGPPGYPGRPGETGDHGKTIAGEAPPGP 254
Query: 486 PGXXGPXXXXXGXXXPPPXRGXXG 557
PG G G PP RG G
Sbjct: 255 PGRQG-EMGPQGPPGPPGPRGKDG 277
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +3
Query: 399 GXXAPPXXKKXPXPGGXGXX--FLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXX 572
G PP P P G + P P PPG GP G P G G P
Sbjct: 239 GPPGPPGPAGPPGPAGNAGQAGYAQPGPAGPPGDAGP-DGAPGNPGQPGAPGDAGAPGSG 297
Query: 573 G 575
G
Sbjct: 298 G 298
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 721 PPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXP 855
P +P VP PP P PT P P P G GP P
Sbjct: 124 PGAPGQPGVPGK--PPTAPCEPTTPPPCKPCPQGPPGPPGPPGAP 166
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 718 PPPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSP 825
PPP + P PP + PP T P P +P
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTP 175
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -2
Query: 888 GXXPGGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPGF 736
G GGG G P GG GG G G GG + GG G+
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW 271
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -2
Query: 888 GXXPGGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPGF 736
G GGG G P GG GG G G GG + GG G+
Sbjct: 183 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW 233
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -2
Query: 888 GXXPGGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPGF 736
G GGG G P GG GG G G GG + GG G+
Sbjct: 221 GGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW 271
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -2
Query: 519 PXXXXGAPGXRGGGRXXGPKTXPPXPXGXGXFXXGGGXPXXP 394
P G PG GG GP+ PP P G G P P
Sbjct: 215 PAGAPGQPGRSGGAGTPGPQ-GPPGPSGQPGHSGNDGVPGTP 255
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -2
Query: 519 PXXXXGAPGXRGGGRXXGPKTXPPXPXGXGXFXXGGGXPXXP 394
P G PG GG GP+ PP P G G P P
Sbjct: 215 PAGGPGQPGHSGGAGSPGPQ-GPPGPSGQPGHSGNDGVPGAP 255
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = -1
Query: 574 PXFXGXPXXPLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPP 395
P G P P GG P + GP P G G + P PG A P
Sbjct: 213 PGPAGGPGQPGHSGGAGSPGPQ--GPPGPSGQPGHSGNDGVPGAPGNPGSPGGDAAYCPC 270
Query: 394 P 392
P
Sbjct: 271 P 271
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 721 PPXXKKPXVPPXKXPPGXPXXPTXXXPXXXXPXSPXGKGGPXXXP 855
P +P VP PP P PT P P P G GP P
Sbjct: 124 PGAPGQPGVPGK--PPTAPCEPTTPPPCKPCPQGPPGPPGPPGAP 166
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -1
Query: 499 PXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGPXXXXXXXGXG 356
P GGG G G G G GG PPP P G G
Sbjct: 21 PSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGG 68
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/70 (30%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Frame = -1
Query: 556 PXXPLXGGGXXXPXXKXXGPXXP---GGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPPGP 386
P P GGG G GGG G G G G GG PPP P
Sbjct: 56 PPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPP 115
Query: 385 XXXXXXXGXG 356
G G
Sbjct: 116 PACGGGCGGG 125
>Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical
protein K02E11.10 protein.
Length = 360
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 876 GGGDXXXGXXGGXPLPXGGXGGXXSGXXXGGXXGGPXRXFXGGNPG 739
GGG G GG P P GG G GG GG PG
Sbjct: 95 GGG---LGGFGGAPAPAPAFGGLGGGYQAAPALGGGLGGGLGGGPG 137
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 5/64 (7%)
Frame = -1
Query: 562 GXPXXPLXGGGXXXPXXKXX-GPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXP---- 398
G P P G P GP P G G + P PG GG P
Sbjct: 180 GEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAG 239
Query: 397 PPGP 386
PPGP
Sbjct: 240 PPGP 243
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/84 (27%), Positives = 25/84 (29%)
Frame = +3
Query: 306 GXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPP 485
G G NG P P G G AP + P P G P P
Sbjct: 165 GEQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPGAPGQVRTVPAPPGNPGQPGEPGAQGP 224
Query: 486 PGXXGPXXXXXGXXXPPPXRGXXG 557
PG G G PP +G G
Sbjct: 225 PGEDG-RPGNSGPQGPPGPQGEPG 247
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -2
Query: 873 GGDXXXGXXGGXPLPX-GGXGGXXSGXXXGGXXGGPXRXFXGGNPGFFXXXGG 718
GG G G P+ GG GG G GG GG F GG G GG
Sbjct: 299 GGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGG----FDGGRGGGGGFRGG 347
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 504 GAPGXRGGGRXXGPKTXPPXPXGXG 430
G G GGG GP PP P G G
Sbjct: 13 GGAGGGGGGPPRGPPQQPPQPQGGG 37
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/95 (28%), Positives = 28/95 (29%), Gaps = 2/95 (2%)
Frame = +3
Query: 300 NXGXXGXNGTPKNXXKKXXPXPXXXFXXXGPGG--GXXAPPXXKKXPXPGGXGXXFLXPX 473
N G G G + P P G G G P K PG P
Sbjct: 160 NAGADGEAGAEGPAGEAGPPGPPGPDGKPGAAGSDGEAGAPGTKTTNAPG-------EPG 212
Query: 474 PFPPPGXXGPXXXXXGXXXPPPXRGXXGFPXXXGK 578
P PPG GP P P G G P GK
Sbjct: 213 PAGPPGPPGPNGEAGAGSGPGP-EGPAGPPGPNGK 246
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = -2
Query: 519 PXXXXGAPGXRGGGRXXGP--KTXPPXPXGXGXFXXGGGXPXXP 394
P G PG GG GP PP P G G P P
Sbjct: 186 PSGAPGVPGQTGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAP 229
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = -2
Query: 519 PXXXXGAPGXRGGGRXXGP--KTXPPXPXGXGXFXXGGGXPXXP 394
P GAPG G G GP PP P G G P P
Sbjct: 212 PQGPPGAPGQPGSGSTPGPAGPPGPPGPNGQPGHPGQDGQPGAP 255
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +3
Query: 306 GXXGXNGTPKNXXKKXXPXPXXXFXXXGPGG--GXXAPPXXKKXPXPGGXGXXFLXPXPF 479
G G G P + K P P GP G G P G G P P
Sbjct: 165 GSDGQPGAPGDAGKDGPPGPPGPDGDSGPNGEAGPNGEPGAPGKDGEKGKG----EPGPA 220
Query: 480 PPPGXXGP 503
PPG GP
Sbjct: 221 GPPGPPGP 228
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/90 (27%), Positives = 28/90 (31%)
Frame = +3
Query: 306 GXXGXNGTPKNXXKKXXPXPXXXFXXXGPGGGXXAPPXXKKXPXPGGXGXXFLXPXPFPP 485
G G G+P + P GP G AP + P G L P P
Sbjct: 163 GDSGEPGSPGLPGQDAAPGEPGPKGPKGPPGAPGAPEHQESQECPRGEP---LIPGEPGP 219
Query: 486 PGXXGPXXXXXGXXXPPPXRGXXGFPXXXG 575
PG GP G P G G P G
Sbjct: 220 PGEAGP-QGPPGSPGQPGADGSPGQPGPKG 248
>AL023838-8|CAL36503.1| 79|Caenorhabditis elegans Hypothetical
protein Y43C5A.7 protein.
Length = 79
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -2
Query: 846 GGXPLPXGGXGGXXS-GXXXGGXXGGPXRXFXGGNPGFFXXXGG 718
GG P+ G GG G GG GGP GG G GG
Sbjct: 25 GGMPMGGMGMGGMGMMGGPYGGMGGGPYGGMGGGGWGRRRMMGG 68
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Frame = +1
Query: 712 GXPPPXXKKPXVPPX-----KXPPGXPXXPTXXXPXXXXPXSPXG 831
G P P P VPP PPG P P P P P G
Sbjct: 687 GQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQG 731
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -1
Query: 562 GXPXXPLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPP 392
G P P GGG P GP P G G + P PG G P P
Sbjct: 157 GNPGAPAQGGGQGPP-----GPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGP 208
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -1
Query: 562 GXPXXPLXGGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPPGXGXFXXXGGAXXPPP 392
G P P GGG P GP P G G + P PG G P P
Sbjct: 157 GNPGAPAQGGGQGPP-----GPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGP 208
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 390 PGGGXXAPPXXKKXPXPG--GXGXXFLXPXPFPPPGXXGP 503
P GG APP P PG G G P PG GP
Sbjct: 783 PRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGP 822
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = +3
Query: 387 GPGG-GXXAPPXXKKXPXPGGXGXXFLXPXPFPPPGXXGPXXXXXGXXXPPPXRGXXGFP 563
GPG G PP P P G G P P P G G P R P
Sbjct: 154 GPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSPP 213
Query: 564 XXXGK 578
G+
Sbjct: 214 GEPGQ 218
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 390 PGGGXXAPPXXKKXPXPG--GXGXXFLXPXPFPPPGXXGP 503
P GG APP P PG G G P PG GP
Sbjct: 783 PRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGP 822
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 538 GGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPP 440
GGG P P PGGG G G P PP
Sbjct: 615 GGGPGGPGGGGGPPRGPGGG-GGGGPTGPPAPP 646
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 538 GGGXXXPXXKXXGPXXPGGGKGXGXKNXXPXPP 440
GGG P P PGGG G G P PP
Sbjct: 615 GGGPGGPGGGGGPPRGPGGG-GGGGPTGPPAPP 646
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = -2
Query: 519 PXXXXGAPGXRGGGRXXGP--KTXPPXPXGXGXFXXGGGXPXXP 394
P G PG GG GP PP P G G P P
Sbjct: 187 PSGAPGQPGRSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAP 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.151 0.535
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,798,729
Number of Sequences: 27780
Number of extensions: 245514
Number of successful extensions: 1800
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -