Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_B02
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 221 4e-58
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 127 1e-29
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 122 4e-28
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 118 7e-27
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 116 3e-26
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 111 8e-25
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 108 6e-24
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 32 0.47
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 32 0.47
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 32 0.47
U21322-1|AAA62542.1| 118|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical ... 30 2.5
Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical pr... 29 4.4
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 221 bits (541), Expect = 4e-58
Identities = 106/213 (49%), Positives = 150/213 (70%)
Frame = +3
Query: 171 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 350
MSSIGTGYDL+AS FSPDGR+FQVEYA KAV+N+GT+I +RGK+GVV +KLI+SKLY
Sbjct: 1 MSSIGTGYDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYT 60
Query: 351 PGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYM 530
AN R+F+++++VG+AVAG D + A EA + Y P+P++ + V+ Y+
Sbjct: 61 DNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYI 120
Query: 531 HAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKL 710
H +TL RP+G +W G ++++++PSG+++ Y AVGK +QAAK EIEKL
Sbjct: 121 HIHTL-GISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKL 179
Query: 711 KLGDLTVKELVREAARIIYLVHDELKDKQFELE 809
K+ +L V +LV+EAARII +V DE KDK ++E
Sbjct: 180 KIEELDVNQLVKEAARIIMVVRDENKDKNVQIE 212
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 127 bits (306), Expect = 1e-29
Identities = 65/183 (35%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Frame = +3
Query: 192 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 371
YD + + FSPDG +FQVEYA +AV+ T +G+RGKD +V VEK L + ++I
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKI 63
Query: 372 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYS 551
ID+HV +A AGL +DAR +V+ AR E +Y+ PV + Y++ ++ +T
Sbjct: 64 HMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSP 123
Query: 552 AVRPYGCSVVMGTWTDYEG-PQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLT 728
RP+G S+++G + D++G P+++ +PSG + Y A G+ ++ + +E+ + T
Sbjct: 124 GRRPFGISMLIGGF-DHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENT 182
Query: 729 VKE 737
V E
Sbjct: 183 VDE 185
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 122 bits (293), Expect = 4e-28
Identities = 69/201 (34%), Positives = 114/201 (56%), Gaps = 4/201 (1%)
Frame = +3
Query: 192 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 371
YD + FSP+GR+FQVEYA +AV+ T IG++ +GV+ A EK TSKL A ++I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKI 67
Query: 372 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAY---- 539
+D+H+G+ AGLI+D+R +VE A+ EA N+ Y + ++ + + V+ +
Sbjct: 68 SKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDD 127
Query: 540 TLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLG 719
S RP+G +++ D EG +++ LDPSG ++G A A+ +++
Sbjct: 128 VKASMSRPFGVAMLF-AGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHD 186
Query: 720 DLTVKELVREAARIIYLVHDE 782
LT+KE ++ A I+ V +E
Sbjct: 187 ALTIKEGLKMALAILKQVMEE 207
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 118 bits (283), Expect = 7e-27
Identities = 65/177 (36%), Positives = 95/177 (53%), Gaps = 1/177 (0%)
Frame = +3
Query: 180 IGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGA 359
+G Y S + FSP G++ Q+EYA AV+N +GLR KDGVV A E + S L +
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATEN-VGSVLTDD-- 57
Query: 360 NKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAY 539
++ I +H+G +G+ D R +V+ AR A Y YG +P L ++ M Y
Sbjct: 58 QPKVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEY 117
Query: 540 TLYSAVRPYGCSVVMGTWTDYEG-PQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK 707
T VRP+G S+++ W G P ++ DPSG F++ A+GK AKT +EK
Sbjct: 118 TQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEK 174
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 116 bits (278), Expect = 3e-26
Identities = 61/210 (29%), Positives = 115/210 (54%), Gaps = 2/210 (0%)
Frame = +3
Query: 192 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGA-NKR 368
YD + FSP+GR++QVEYA +A+ ++GT +G+ +G+V A E+ KL + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEK 64
Query: 369 IFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLY 548
++ + +++ VAG+ +DA ++ R A++YR+ YG +P++ L + + YT
Sbjct: 65 VYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQI 124
Query: 549 SAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLT 728
RP+G S++ W + G Q+Y DPSG + +G QAA T + K +
Sbjct: 125 GGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVT-LLKQEYKSPN 183
Query: 729 VKELVREAARIIYLVHD-ELKDKQFELEXL 815
++E + A ++++ D +L ++ E+ L
Sbjct: 184 LEEAKQLAIKVLWKTLDVKLASEKVEMAVL 213
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 111 bits (266), Expect = 8e-25
Identities = 59/191 (30%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Frame = +3
Query: 189 GYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGANK 365
G+D + FSP+GRV+QVEYA KA+ ++ T + ++G D V AV+K + L
Sbjct: 8 GFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVT 67
Query: 366 RIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTL 545
++ I + VG G+I DA+ ++ A+ EA++++ + G +P + L ++++ YT
Sbjct: 68 SVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQ 127
Query: 546 YSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK--LKLG 719
+ +R GC+++ ++ D +GP++Y +DP+G G +VG + A + +EK K
Sbjct: 128 NAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKS 187
Query: 720 DLTVKELVREA 752
+LT E + A
Sbjct: 188 ELTSTEAIELA 198
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 108 bits (259), Expect = 6e-24
Identities = 54/172 (31%), Positives = 94/172 (54%)
Frame = +3
Query: 192 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 371
YD + +SP GR+ QVEYA +A++ +G++ + V K + L K++
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDL--SSHQKKV 63
Query: 372 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYS 551
+ ID H G+++AGL+SD R + ++E S++R Y VP+K L E + + + A T Y
Sbjct: 64 YEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYY 123
Query: 552 AVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEK 707
RP+G +++ + D +G + DPS S G ++G Q+A+T +E+
Sbjct: 124 GRRPFGVGILIAGY-DKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLER 174
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 32.3 bits (70), Expect = 0.47
Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 1/173 (0%)
Frame = +3
Query: 249 AAKAVENSGTVIGLRGKDGVVFAVEKLITS-KLYEPGANKRIFHIDEHVGMAVAGLISDA 425
A K T++ + K G+V + T+ + +++ + E + AG +D
Sbjct: 39 APKLTSTGTTIVAVAFKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADL 98
Query: 426 RQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYE 605
Q+ + G + + ++ Y Y G +++G D
Sbjct: 99 DQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGY-----IGAYLLIGG-VDPT 152
Query: 606 GPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLTVKELVREAARII 764
GP +YM +G + ++ A G AA T +E+ D+T E + R +
Sbjct: 153 GPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKLVQRAL 205
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +3
Query: 552 AVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLTV 731
A+ P G + G DYE +Y+ + SG++ +G++ A + + +G LT+
Sbjct: 2149 AMEPIGGLSITGVDYDYESKTIYVAEASGINKGITAYTIGESSPRA---VIRDSIGSLTI 2205
Query: 732 KELVREAARI-IYLVHDELKDKQFELEXL 815
K L + +Y ++ + + E+ L
Sbjct: 2206 KSLAIDWINYNMYFINHDAERTNIEVSKL 2234
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +3
Query: 552 AVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLTV 731
A+ P G + G DYE +Y+ + SG++ +G++ A + + +G LT+
Sbjct: 2149 AMEPIGGLSITGVDYDYESKTIYVAEASGINKGITAYTIGESSPRA---VIRDSIGSLTI 2205
Query: 732 KELVREAARI-IYLVHDELKDKQFELEXL 815
K L + +Y ++ + + E+ L
Sbjct: 2206 KSLAIDWINYNMYFINHDAERTNIEVSKL 2234
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 32.3 bits (70), Expect = 0.47
Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 1/165 (0%)
Frame = +3
Query: 246 YAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPG-ANKRIFHIDEHVGMAVAGLISD 422
Y + + T+I + GVV + ++ + A +I I +++ + +G +D
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 423 ARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDY 602
+ I + A+ Y PV + R S + LY+ SV++ W +
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIY----RSSQIFRQF-LYNYREQLSASVLVAGWDEE 129
Query: 603 EGPQMYMLDPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLTVKE 737
G Q+Y + G A G + ++ +LT++E
Sbjct: 130 LGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEE 174
>U21322-1|AAA62542.1| 118|Caenorhabditis elegans Hypothetical
protein K10D2.5 protein.
Length = 118
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 666 VGKAKQAAKTEIEKLKLGDLTVKELV---REAARIIYLVHDELKD 791
V K + AK EIE+L+ D+T++E+ RE R + +V D++ D
Sbjct: 32 VAKINEPAKYEIEQLEERDMTMEEIESMRREENRCLVIVEDKIYD 76
>AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical
protein Y71H2AM.10 protein.
Length = 871
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -2
Query: 457 ASERAVSTICLASDMSPATAMPTCSSIWNILLFAPGSYNFDV-INFSTANTTPS----FP 293
A + + C++SD + PTCSS++ + GS + V ++ TT S FP
Sbjct: 327 AEDVTTQSHCISSDANIIKVSPTCSSVYLDGSESNGSSDAQVYAHYLRYTTTYSFRVWFP 386
Query: 292 RRPITVPEFSTAFAAYSTWK 233
+ P+ + S+ + WK
Sbjct: 387 KLPLKIWMSSSTLSTIKNWK 406
>Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical
protein T21B10.2b protein.
Length = 337
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 147 KYIKQCVNMSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIG 287
KYI + I G D++AS+F DG+ + +++ A ++S + G
Sbjct: 132 KYIAELAGTGKISIGMDVAASEFFKDGK-YDLDFKNPASDSSKWLSG 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,659,873
Number of Sequences: 27780
Number of extensions: 394462
Number of successful extensions: 976
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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