Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_B02
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.69 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.92 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.9  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   6.5  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   6.5  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   6.5  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   6.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   6.5  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   8.5  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 25.4 bits (53), Expect = 0.69
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 717  GDLTVKELVREAARIIYLVHDELKDKQFE 803
            GD T+ E V +  + I   H E+ DKQ E
Sbjct: 1073 GDCTMAEDVYQTLKHIIQTHGEMTDKQVE 1101


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 561 PYGCSVVMGTWTDYEGPQMY 620
           P GC+VV+GT+  +  P +Y
Sbjct: 435 PAGCTVVIGTFKLHRQPHIY 454


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 874 LRGELXAEPAHGD 836
           L GE   EPAHG+
Sbjct: 418 LNGEFEVEPAHGE 430


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 320 NSKYHSIFSSEANNCSRIFYSL 255
           N KY+   ++  NNC +++Y++
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNI 116


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 320 NSKYHSIFSSEANNCSRIFYSL 255
           N KY+   ++  NNC +++Y++
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNI 116


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 320 NSKYHSIFSSEANNCSRIFYSL 255
           N KY+   ++  NNC +++Y++
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNI 116


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 320 NSKYHSIFSSEANNCSRIFYSL 255
           N KY+   ++  NNC +++Y++
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNI 116


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 412 SPATAMPTCSSIWNILLFAPGSYNFDVINFSTANT 308
           S  T+ P   S   I    PGS+NF +   +T +T
Sbjct: 286 SEHTSTPNFLSEAKIFPPTPGSFNFSMAALATEHT 320


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/25 (28%), Positives = 18/25 (72%)
 Frame = -1

Query: 320 NSKYHSIFSSEANNCSRIFYSLCSI 246
           N+ Y++ ++   NNC +++Y++ +I
Sbjct: 340 NNNYNNNYN---NNCKKLYYNIINI 361


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,153
Number of Sequences: 438
Number of extensions: 5049
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)