Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_A24
(919 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0085 + 17790417-17790714,17791826-17791869,17793658-177937... 33 0.42
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708... 33 0.42
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 31 0.97
12_02_0628 + 21357876-21359921 30 2.2
05_02_0034 + 5856165-5856183,5858845-5859173,5859275-5859277,585... 30 2.2
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 30 3.0
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 30 3.0
02_04_0545 + 23778769-23779245,23779395-23779688 30 3.0
05_06_0192 - 26273599-26274543 29 3.9
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 29 3.9
05_04_0367 - 20672776-20673550,20674097-20674320,20674626-206748... 29 3.9
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 29 5.2
04_04_0092 - 22759791-22760676,22761446-22761813,22762202-227622... 29 6.8
04_04_0089 - 22724971-22725035,22725403-22725466,22725602-227256... 29 6.8
04_03_0785 + 19619062-19619532,19620047-19621012 29 6.8
05_03_0427 - 13886814-13887935 28 9.0
03_01_0273 - 2107778-2108772,2108857-2109043,2109121-2110575,211... 28 9.0
02_01_0080 + 558915-558962,559016-559209,559644-559965 28 9.0
01_07_0298 - 42586007-42589742,42590167-42590280,42590295-425904... 28 9.0
01_06_0921 - 33017892-33018953 28 9.0
>05_04_0085 +
17790417-17790714,17791826-17791869,17793658-17793793,
17794315-17794391,17794646-17794706,17794707-17794924,
17795168-17795412,17796032-17796401,17796916-17797344
Length = 625
Score = 32.7 bits (71), Expect = 0.42
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Frame = +3
Query: 363 KRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSPLY-PICRA---- 527
KRR SD D+ + E + +++ Q L DR+ L + DED L CR
Sbjct: 126 KRRASDSDQPILQRAEKMKAERNLDNQKTTGSLQDRAAQLQKCDEDIKLIKTACRIHETM 185
Query: 528 -WIANQPKADYSKFGY 572
+ + P Y +GY
Sbjct: 186 FYSHSSPLTTYIIYGY 201
>03_02_0283 -
7078754-7078856,7079358-7079431,7079995-7080090,
7080145-7080270,7080856-7080939,7081458-7081506,
7081630-7081688,7081908-7081925,7082141-7082620
Length = 362
Score = 32.7 bits (71), Expect = 0.42
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +3
Query: 408 EDIHSQKQSQRQ---SYVLKLFDRSVDLSQFDEDSPLYPICRAWIANQPKADYSKFGYDQ 578
++I++ K S+R S + + DR V+L E LY +CR+W+ N + S+F Q
Sbjct: 178 QEINNSKDSERSKEDSTTVVINDRKVNLMD-SESGSLYALCRSWVRNGVPHE-SQF--LQ 233
Query: 579 PEDNEDIMTIDLPGPEGPPVSRIPELLPEQKAANKDNIDLE 701
P + P P SRI E + A K+N + E
Sbjct: 234 PSFGTGAPILPRPLPASVVDSRISE---KDNDAEKENSEEE 271
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 31.5 bits (68), Expect = 0.97
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 310 KYWNRHWILMTLLNLHRGKEDNQIKMKPMYRKKK 411
++W ++WIL+ +L + DN + PMY + K
Sbjct: 38 RFWCQYWILLAVLTVFERVGDNFVSWLPMYSEAK 71
>12_02_0628 + 21357876-21359921
Length = 681
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 330 DSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFD---ED 500
D DD EL G RR D ++ S D++ + + Q + DR + L++ +D
Sbjct: 120 DDDDDDELDEG-RRSGDDSDSAPSVGSDLYKDEDDKEQLEKMSELDREMILAERGARIDD 178
Query: 501 SPLYPICRAWIANQPKADYSK 563
L + RA ++ KAD S+
Sbjct: 179 YKLKQLARA-SSSSSKADKSR 198
>05_02_0034 +
5856165-5856183,5858845-5859173,5859275-5859277,
5859440-5859517,5859623-5860090,5860378-5860437,
5860442-5860666,5860791-5860952,5861502-5861870,
5861950-5863390,5863598-5863701,5863744-5863779,
5863780-5863977,5864275-5864538
Length = 1251
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 519 CRAWIANQPKADYSKFGYDQPEDNE-DIMTIDLPGPEGPPVSRIPEL 656
CR + N+P DYS+F + ED++ +I+ D+ P +R P L
Sbjct: 86 CRKSLRNRPPIDYSRFEHISDEDSDVEIVEKDVIAKWNPAGARRPVL 132
>08_02_0095 -
12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 336 DDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLK 458
D + E ++ + +++E V EEE I + +RQ+ VLK
Sbjct: 435 DKNAEQEEEEQEEEEEEEEEVEEEEQIEEATEQERQTNVLK 475
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 29.9 bits (64), Expect = 3.0
Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 4/125 (3%)
Frame = +3
Query: 354 TPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSPLYPICRAWI 533
TPG + E I K+ QS + + S D + P P I
Sbjct: 1155 TPGSSPDNQDTEREYPSPPPISGSKEISPQSRTI--LESSPDNQDNGHEYPSPPPIPESI 1212
Query: 534 ANQPKADYSKFGYDQPEDNEDIMTIDLPGP----EGPPVSRIPELLPEQKAANKDNIDLE 701
P +SK + DN+DI + P P E +SR ++LPE N+D I+ E
Sbjct: 1213 ELSP---HSKALPESSPDNQDIEP-ECPSPPQIPESKELSRQSKILPESSPGNQD-IEPE 1267
Query: 702 YTPPP 716
PP
Sbjct: 1268 CPSPP 1272
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +3
Query: 579 PEDNEDIMTIDLPGPEGPPVSRIPELLPEQKAANK---DNIDLEYTPPPS 719
PE + D I P P+S+ E+ P+ K ++ DN D+E P S
Sbjct: 1321 PESSSDNQDIKCEDPSPTPISKSKEVSPQSKILSESYLDNQDVERECPSS 1370
>02_04_0545 + 23778769-23779245,23779395-23779688
Length = 256
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +3
Query: 627 GPPVSRIPELLPEQKAANKDNIDLEYTPPPSRXAAVIFTAS 749
G + +PEL Q AAN D+ Y PP+R AA FTA+
Sbjct: 194 GRTTAEVPELFASQ-AAN----DVAYYRPPTRTAAAAFTAA 229
>05_06_0192 - 26273599-26274543
Length = 314
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 711 PPSRXAAVIFTASPAGSAVREAWLQQSARAEARYEA 818
PPS A V+ +P S E+W+ +AEAR +A
Sbjct: 24 PPSLPAEVVPAFAPPESEDEESWVWSQIKAEARRDA 59
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +3
Query: 591 EDIMTIDLPGPEGPPVSRIPELLPEQKAANKDNIDLEYTPPPSRXAAVIFTASPAGSAVR 770
E + +LP PE ++++ EL+ AA + ++ PPP++ P +A
Sbjct: 75 ESNLVSELPDPERTALAQLKELVAAALAAGEFDLPPPPPPPPAKAEEPAKEEEPK-AAEA 133
Query: 771 EAWLQQSARAEARYEA 818
A + A AEA EA
Sbjct: 134 PAAEEPKAEAEAEAEA 149
>05_04_0367 -
20672776-20673550,20674097-20674320,20674626-20674843,
20675133-20676534
Length = 872
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 621 PEGPPVSRIPELLPEQKAANKDNIDLEYTPPPSRXAAVIFTASPAGSAVRE 773
P PP +PE+ P D+ D P + A FT+SP S VRE
Sbjct: 249 PAPPPPMPMPEVSPWDFFNPFDSYDYNQQLPQYKDANGSFTSSPNSSEVRE 299
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -3
Query: 767 HCRPSGAC-SEDNSCXPAWWWCIFKINIVLVGCLLFRQQLWYPRDWRSLWPWQVYCHNIL 591
HC G C ++ N C +WW IF+ ++ V + F Q +Y S W + + ++
Sbjct: 161 HCVWLGTCIAKRNYCR--FWWYIFEQTVLTVWTVAFYIQFFYLGIVVSWWKFAIGIVLLV 218
Query: 590 VVFRLIITKFAVISF 546
+ +++ ++ F
Sbjct: 219 ALILILVVLLPLLIF 233
>04_04_0092 -
22759791-22760676,22761446-22761813,22762202-22762207,
22763365-22763603,22764808-22765339
Length = 676
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 713 TKPGSSCYLHCKPRWVGSEGSXVTTIRTSRSK 808
TK SCY HC+P G E + T + + K
Sbjct: 53 TKEFISCYGHCRPTTYGDEDASRTAVEVTGGK 84
>04_04_0089 -
22724971-22725035,22725403-22725466,22725602-22725688,
22726775-22726789,22736269-22736685,22738235-22738473,
22739673-22740223,22740440-22740540
Length = 512
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 713 TKPGSSCYLHCKPRWVGSEGSXVTTIRTSRSK 808
TK SCY HC+P G E + T + + K
Sbjct: 93 TKEFISCYGHCRPTTYGDEDASRTAVEVTGGK 124
>04_03_0785 + 19619062-19619532,19620047-19621012
Length = 478
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 396 VSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSPLYP 515
+ +E+ K +R + + D+S +L + DEDSP+ P
Sbjct: 290 LKRKEEQGDSKPRKRVKFAADVKDQSAELPEQDEDSPMVP 329
>05_03_0427 - 13886814-13887935
Length = 373
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 644 PRDWRSLWPWQVYCHNILVVFRLIITKFAVI 552
PR W PW YC+N L T F V+
Sbjct: 116 PRSWLQWLPWSEYCYNTSFQSFLRETPFKVV 146
>03_01_0273 -
2107778-2108772,2108857-2109043,2109121-2110575,
2110670-2111251
Length = 1072
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 249 ISNKVKEVTTARGRLQGALME-ILEPALDSDD 341
+SN++ V A GRL+ AL++ ++E DSDD
Sbjct: 604 LSNELVHVLHAAGRLEKALVQMVVEDVADSDD 635
>02_01_0080 + 558915-558962,559016-559209,559644-559965
Length = 187
Score = 28.3 bits (60), Expect = 9.0
Identities = 22/106 (20%), Positives = 46/106 (43%)
Frame = +3
Query: 150 VYSPKGAGLKMRKRRRIFTPIKNKGKSLTQFPQISNKVKEVTTARGRLQGALMEILEPAL 329
V + G G R+R+ I K K + + N+VK++T+ ++
Sbjct: 36 VTAAAGGGSSSRRRKAIKRNFKAKEADRKETEEEGNQVKKITS---------QQLKRKRK 86
Query: 330 DSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFD 467
+D++E K+RQ+++ E ++ + K+ + Y+ FD
Sbjct: 87 KEEDASEKKKKKKRQTEEAE--AEKKIEARKAKKEAYERYLANFFD 130
>01_07_0298 -
42586007-42589742,42590167-42590280,42590295-42590437,
42591174-42591347
Length = 1388
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 411 DIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSPLYPICR 524
DI+++ +R+ YV+KL SVD S +D D+P+ I R
Sbjct: 150 DIYAEVPGRREGYVMKLL--SVDPSNYD-DAPIEGIRR 184
>01_06_0921 - 33017892-33018953
Length = 353
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/83 (20%), Positives = 36/83 (43%)
Frame = +3
Query: 309 EILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQ 488
E +E SDD T++ P + D VSEE+ + + + + ++ R+ D+ +
Sbjct: 129 ERVEEGDSSDDETDINPAEWASEDFSGLIVSEEDSVR-WEYKENEVIQGAIYSRAEDMKE 187
Query: 489 FDEDSPLYPICRAWIANQPKADY 557
+ + W+A ++ Y
Sbjct: 188 AVKHFAVSLHREFWVAKSNRSQY 210
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,058,885
Number of Sequences: 37544
Number of extensions: 456062
Number of successful extensions: 1612
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -