Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_A24
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 31 0.87
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF067608-10|AAC17650.1| 261|Caenorhabditis elegans Hypothetical... 31 1.2
Z69904-10|CAA93782.2| 754|Caenorhabditis elegans Hypothetical p... 30 2.7
Z69902-13|CAA93770.2| 754|Caenorhabditis elegans Hypothetical p... 30 2.7
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 2.7
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 29 3.5
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 29 4.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.7
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 29 6.2
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 29 6.2
U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type chlo... 28 8.1
AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical... 28 8.1
AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride ... 28 8.1
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 31.5 bits (68), Expect = 0.87
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +3
Query: 246 QISNKVKEVTTARGRLQGALMEILEPA-----LDSDDSTELTPGKRRQSDQDETYVSEEE 410
++ ++KE + R QG + EPA +DSDD L K+R+ +DE E+E
Sbjct: 584 KVDKELKEKEKRKLRDQGGWLAAGEPAPSNARIDSDDEDALEEAKKRKWSEDE---EEDE 640
Query: 411 DIHSQK 428
D+ K
Sbjct: 641 DMEEDK 646
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 585 LQVDHNQICCNQL*VGLQSRLCRSDREGNPHQTVTS 478
L+VD++ +CC + Q+ L D EGN H + S
Sbjct: 161 LEVDYSGVCCEDMCSAGQTSLTVCDSEGNTHTDICS 196
>AF067608-10|AAC17650.1| 261|Caenorhabditis elegans Hypothetical
protein B0511.3 protein.
Length = 261
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +3
Query: 411 DIHSQKQSQRQSYVLKLFDRSVD--LSQFDEDSPLYPICRAWIANQPKADYSKFGYDQPE 584
D+H + + ++ + L+ F +D +SQ C W++ +
Sbjct: 40 DLHERFRVRKSNQTLRQFIDQMDPAISQIRVSISDSDKCDDWVSRSVRVMAEMLSSSIYP 99
Query: 585 DNEDIMTIDLPGPEGPPVSRIPELLPEQKAANKDNIDLEYTPPPS 719
D ++I T LP S+I ++LP +A +N+DL Y P+
Sbjct: 100 DVKNISTCGLPS------SQIAQILPSFQAGKLENLDLYYCGKPT 138
>Z69904-10|CAA93782.2| 754|Caenorhabditis elegans Hypothetical
protein ZK20.6 protein.
Length = 754
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +3
Query: 390 TYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSPLYPICRAWIANQPKAD----Y 557
T V EE+ ++ S+ +L +S++LS D CRAW+ + P D Y
Sbjct: 52 TVVEEEKKTYTVGDSEGYQEASRLLQKSLNLSLDPCDDFFEYACRAWVDSHPIPDDLTSY 111
Query: 558 SKF 566
S+F
Sbjct: 112 SQF 114
>Z69902-13|CAA93770.2| 754|Caenorhabditis elegans Hypothetical
protein ZK20.6 protein.
Length = 754
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +3
Query: 390 TYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDSPLYPICRAWIANQPKAD----Y 557
T V EE+ ++ S+ +L +S++LS D CRAW+ + P D Y
Sbjct: 52 TVVEEEKKTYTVGDSEGYQEASRLLQKSLNLSLDPCDDFFEYACRAWVDSHPIPDDLTSY 111
Query: 558 SKF 566
S+F
Sbjct: 112 SQF 114
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Frame = +3
Query: 579 PEDNEDIMTIDLPGPEGPPVSRIP-------ELLPEQKAANKDNIDLEYTPPPSRXAAVI 737
PE+++D + LP PE PV R P E P + + + PPP
Sbjct: 524 PEESDDDQELILPSPEPSPV-REPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKPRP 582
Query: 738 FTASPAGSAVREAWLQQSARAEARYEATXK 827
TA+ + R+A+ +++ R Y+ K
Sbjct: 583 LTAAEIAAQKRKAYSEEAWRRYQEYQKQWK 612
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 276 TARGRLQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVL 455
+AR R +++EI + D +D ++ R SD+ TY + EED + Q + +
Sbjct: 438 SARSRGSDSVVEIDDD--DDNDGVDVDDDDREDSDEPRTYSNSEEDSDEEIQVVERDDTI 495
Query: 456 KLFDRSVDL 482
L D + L
Sbjct: 496 ILDDSNRSL 504
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical protein
C50F2.2 protein.
Length = 1029
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +3
Query: 303 LMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKL-FDRSVD 479
L E+ + A + D++ + + DE EEED +++ S + + + D
Sbjct: 787 LSEMEKSAENLDENMDWIENLEELGNDDEQEEEEEEDQEQEQEQVAPSRSISVPLEMKND 846
Query: 480 LSQFDEDSPLYPICRAWIANQPKADYSKFGYDQPEDNEDIM 602
DED P+ P+ D S + ED E+++
Sbjct: 847 FVLSDEDDPVSPVTSTPRKEDFNDDLSGCLEEDEEDTENLL 887
>U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical
protein F28E10.1b protein.
Length = 777
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 561 KFGYDQPEDNEDIMTIDLPGPEGPPV 638
K ++PE+ ED++ I+ P P PP+
Sbjct: 217 KMEVERPEEAEDVIVIEAPEPVQPPI 242
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 561 KFGYDQPEDNEDIMTIDLPGPEGPPV 638
K ++PE+ ED++ I+ P P PP+
Sbjct: 313 KMEVERPEEAEDVIVIEAPEPVQPPI 338
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 561 KFGYDQPEDNEDIMTIDLPGPEGPPV 638
K ++PE+ ED++ I+ P P PP+
Sbjct: 359 KMEVERPEEAEDVIVIEAPEPVQPPI 384
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 609 DLPGPEGPPVSRIPELLP--EQKAANKDNIDLEYTPPP 716
D P P PPVS IP P AAN N+ + PPP
Sbjct: 529 DPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPP 566
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = +3
Query: 243 PQISNKVKEVTTARGRLQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHS 422
P++ + KE T++ L+ E LD D E + + D+DE E+E+
Sbjct: 541 PELISSFKEPTSSDSLLRKEAHAPNELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEE 600
Query: 423 QKQSQRQ 443
+++++ +
Sbjct: 601 EEENESE 607
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = +3
Query: 243 PQISNKVKEVTTARGRLQGALMEILEPALDSDDSTELTPGKRRQSDQDETYVSEEEDIHS 422
P++ + KE T++ L+ E LD D E + + D+DE E+E+
Sbjct: 551 PELISSFKEPTSSDSLLRKEAHAPNELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEE 610
Query: 423 QKQSQRQ 443
+++++ +
Sbjct: 611 EEENESE 617
>U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform b protein.
Length = 811
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 363 KRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDS 503
+R +S D+T S E ++++ R + + ++ +DLSQ D DS
Sbjct: 714 RREESKSDDTEDSLETTGAGERRASRYEWEDMMLNQKLDLSQLDIDS 760
>AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical
protein Y56A3A.30 protein.
Length = 767
Score = 28.3 bits (60), Expect = 8.1
Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 18/209 (8%)
Frame = +3
Query: 243 PQISNKVKEVTTARGRLQGALMEILEPALDSDDST-ELTPGKRRQSDQDETYVSEEEDI- 416
P +SN V E + + + + P D+ +ST ++ R SDQ + I
Sbjct: 337 PAVSNTVSENSNTDSEICSGIDQ--NPNSDNLESTIDVGEPLRNTSDQPSPDPCSDVQIG 394
Query: 417 --HSQKQSQRQSYVLKLFDRSVDLSQFDEDS--PLYPICRAWIANQPKADYSKFGYDQPE 584
+ KQS S ++L +S D D + L C + P ++ + G + +
Sbjct: 395 VNSTTKQSTDPSVNVQLGHKSSDQPSTDPSAHAQLEDNCTIQPSTDPSSN-DQLGDNTSD 453
Query: 585 DNEDIMTIDLP----GPEG------PPVSRIPEL-LPEQKAANKDNID-LEYTPPPSRXA 728
N + D+P G G PP + E+ +P+ + NI PP + A
Sbjct: 454 QNSTDPSSDVPMEDPGESGSAASTPPPDWDVAEVPIPQCSGHSDGNIGGTNEVTPPEQEA 513
Query: 729 AVIFTASPAGSAVREAWLQQSARAEARYE 815
V+ S ++ WL + RYE
Sbjct: 514 QVLAPRRSERSRIKNIWLSRDEVERLRYE 542
>AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 811
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 363 KRRQSDQDETYVSEEEDIHSQKQSQRQSYVLKLFDRSVDLSQFDEDS 503
+R +S D+T S E ++++ R + + ++ +DLSQ D DS
Sbjct: 714 RREESKSDDTEDSLETTGAGERRASRYEWEDMMLNQKLDLSQLDIDS 760
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,151,620
Number of Sequences: 27780
Number of extensions: 405343
Number of successful extensions: 1687
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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