Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_A22
         (931 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132723-1|AAI32724.1| 1479|Homo sapiens CLASP1 protein protein.       33   1.5  
BC112940-1|AAI12941.1| 1471|Homo sapiens CLASP1 protein protein.       33   1.5  
AJ288057-1|CAC35156.1|  266|Homo sapiens CLIP-associating protei...    33   1.5  
AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.    33   1.5  
BC059408-1|AAH59408.1|  267|Homo sapiens ovo-like 1(Drosophila) ...    32   3.4  
BC043146-1|AAH43146.1|  244|Homo sapiens OVOL1 protein protein.        32   3.4  
BC117342-1|AAI17343.1|  130|Homo sapiens chromosome 4 open readi...    31   6.0  
AK172776-1|BAD18758.1|  130|Homo sapiens protein ( Homo sapiens ...    31   6.0  
AK074237-1|BAB85027.1|  130|Homo sapiens protein ( Homo sapiens ...    31   6.0  

>BC132723-1|AAI32724.1| 1479|Homo sapiens CLASP1 protein protein.
          Length = 1479

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 432 NGGNFKVAQNGLEVLTVLTERLGQDFSHFVPTVLPHII 545
           N  N+KV   G+++L+ L  RL   F   + TVLP +I
Sbjct: 60  NSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLI 97


>BC112940-1|AAI12941.1| 1471|Homo sapiens CLASP1 protein protein.
          Length = 1471

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 432 NGGNFKVAQNGLEVLTVLTERLGQDFSHFVPTVLPHII 545
           N  N+KV   G+++L+ L  RL   F   + TVLP +I
Sbjct: 60  NSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLI 97


>AJ288057-1|CAC35156.1|  266|Homo sapiens CLIP-associating protein
           CLASP1 protein.
          Length = 266

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 432 NGGNFKVAQNGLEVLTVLTERLGQDFSHFVPTVLPHII 545
           N  N+KV   G+++L+ L  RL   F   + TVLP +I
Sbjct: 60  NSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLI 97


>AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.
          Length = 1538

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 432 NGGNFKVAQNGLEVLTVLTERLGQDFSHFVPTVLPHII 545
           N  N+KV   G+++L+ L  RL   F   + TVLP +I
Sbjct: 60  NSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLI 97


>BC059408-1|AAH59408.1|  267|Homo sapiens ovo-like 1(Drosophila)
           protein.
          Length = 267

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 614 PPAPRRTRGPPVSRTPSCPLALSNNM 537
           PP P R   P V+  PSCPLAL+ ++
Sbjct: 40  PPQPYREPEPSVAEPPSCPLALNMSL 65


>BC043146-1|AAH43146.1|  244|Homo sapiens OVOL1 protein protein.
          Length = 244

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 614 PPAPRRTRGPPVSRTPSCPLALSNNM 537
           PP P R   P V+  PSCPLAL+ ++
Sbjct: 17  PPQPYREPEPSVAEPPSCPLALNMSL 42


>BC117342-1|AAI17343.1|  130|Homo sapiens chromosome 4 open reading
           frame 26 protein.
          Length = 130

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 623 LDSPPAPRR--TRGPPVSRTPSCP 558
           L  PPAPR   TR  P+++TP CP
Sbjct: 48  LTPPPAPRSPVTRAQPITKTPRCP 71


>AK172776-1|BAD18758.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23937 fis, clone COLF6762. ).
          Length = 130

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 623 LDSPPAPRR--TRGPPVSRTPSCP 558
           L  PPAPR   TR  P+++TP CP
Sbjct: 48  LTPPPAPRSPVTRAQPITKTPRCP 71


>AK074237-1|BAB85027.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23657 fis, clone COLF1189. ).
          Length = 130

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 623 LDSPPAPRR--TRGPPVSRTPSCP 558
           L  PPAPR   TR  P+++TP CP
Sbjct: 48  LTPPPAPRSPVTRAQPITKTPRCP 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,441,787
Number of Sequences: 237096
Number of extensions: 1791674
Number of successful extensions: 4645
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4632
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)