Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_A21
         (882 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U96074-1|AAC78728.1|  320|Homo sapiens translation initiation fa...    47   1e-04
CR457134-1|CAG33415.1|  320|Homo sapiens EIF3S4 protein.               47   1e-04
BT006889-1|AAP35535.1|  320|Homo sapiens eukaryotic translation ...    47   1e-04
BC008469-1|AAH08469.1|  320|Homo sapiens eukaryotic translation ...    47   1e-04
BC000733-1|AAH00733.1|  320|Homo sapiens eukaryotic translation ...    47   1e-04
AF094850-1|AAG15419.1|  320|Homo sapiens eukaryotic translation ...    47   1e-04
AF092453-1|AAG15396.1|  320|Homo sapiens eukaryotic translation ...    47   1e-04
AF020833-1|AAB71866.1|  320|Homo sapiens eukaryotic translation ...    47   1e-04

>U96074-1|AAC78728.1|  320|Homo sapiens translation initiation
           factor eIF3 p44 subunit protein.
          Length = 320

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 29/96 (30%), Positives = 40/96 (41%)
 Frame = +2

Query: 332 VXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQXPX 511
           V T++ E R  SK +A+RK W K G            TT V +DV   FI S E+     
Sbjct: 82  VRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE 141

Query: 512 DXELXGLNPPSSNVXFXCRTCQGSTI*HRIVHXSTL 619
           + +   +N         CR C+G     R  +  TL
Sbjct: 142 EED--PMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175


>CR457134-1|CAG33415.1|  320|Homo sapiens EIF3S4 protein.
          Length = 320

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 29/96 (30%), Positives = 40/96 (41%)
 Frame = +2

Query: 332 VXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQXPX 511
           V T++ E R  SK +A+RK W K G            TT V +DV   FI S E+     
Sbjct: 82  VRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE 141

Query: 512 DXELXGLNPPSSNVXFXCRTCQGSTI*HRIVHXSTL 619
           + +   +N         CR C+G     R  +  TL
Sbjct: 142 EED--PMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175


>BT006889-1|AAP35535.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 4 delta, 44kDa protein.
          Length = 320

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 29/96 (30%), Positives = 40/96 (41%)
 Frame = +2

Query: 332 VXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQXPX 511
           V T++ E R  SK +A+RK W K G            TT V +DV   FI S E+     
Sbjct: 82  VRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE 141

Query: 512 DXELXGLNPPSSNVXFXCRTCQGSTI*HRIVHXSTL 619
           + +   +N         CR C+G     R  +  TL
Sbjct: 142 EED--PMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175


>BC008469-1|AAH08469.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 4 delta, 44kDa protein.
          Length = 320

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 29/96 (30%), Positives = 40/96 (41%)
 Frame = +2

Query: 332 VXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQXPX 511
           V T++ E R  SK +A+RK W K G            TT V +DV   FI S E+     
Sbjct: 82  VRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE 141

Query: 512 DXELXGLNPPSSNVXFXCRTCQGSTI*HRIVHXSTL 619
           + +   +N         CR C+G     R  +  TL
Sbjct: 142 EED--PMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175


>BC000733-1|AAH00733.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 4 delta, 44kDa protein.
          Length = 320

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 29/96 (30%), Positives = 40/96 (41%)
 Frame = +2

Query: 332 VXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQXPX 511
           V T++ E R  SK +A+RK W K G            TT V +DV   FI S E+     
Sbjct: 82  VRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE 141

Query: 512 DXELXGLNPPSSNVXFXCRTCQGSTI*HRIVHXSTL 619
           + +   +N         CR C+G     R  +  TL
Sbjct: 142 EED--PMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175


>AF094850-1|AAG15419.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3 subunit p42/p44 protein.
          Length = 320

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 29/96 (30%), Positives = 40/96 (41%)
 Frame = +2

Query: 332 VXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQXPX 511
           V T++ E R  SK +A+RK W K G            TT V +DV   FI S E+     
Sbjct: 82  VRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE 141

Query: 512 DXELXGLNPPSSNVXFXCRTCQGSTI*HRIVHXSTL 619
           + +   +N         CR C+G     R  +  TL
Sbjct: 142 EED--PMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175


>AF092453-1|AAG15396.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3 subunit p42/p44 protein.
          Length = 320

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 29/96 (30%), Positives = 40/96 (41%)
 Frame = +2

Query: 332 VXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQXPX 511
           V T++ E R  SK +A+RK W K G            TT V +DV   FI S E+     
Sbjct: 82  VRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE 141

Query: 512 DXELXGLNPPSSNVXFXCRTCQGSTI*HRIVHXSTL 619
           + +   +N         CR C+G     R  +  TL
Sbjct: 142 EED--PMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175


>AF020833-1|AAB71866.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3 subunit protein.
          Length = 320

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 29/96 (30%), Positives = 40/96 (41%)
 Frame = +2

Query: 332 VXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQXPX 511
           V T++ E R  SK +A+RK W K G            TT V +DV   FI S E+     
Sbjct: 82  VRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE 141

Query: 512 DXELXGLNPPSSNVXFXCRTCQGSTI*HRIVHXSTL 619
           + +   +N         CR C+G     R  +  TL
Sbjct: 142 EED--PMNKLKGQKIVSCRICKGDHWTTRCPYKDTL 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,051,655
Number of Sequences: 237096
Number of extensions: 631898
Number of successful extensions: 476
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)