Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_A21
         (882 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p pro...    52   1e-06
AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA ...    52   1e-06
AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-P...    46   9e-05

>AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p
           protein.
          Length = 269

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 30/83 (36%), Positives = 41/83 (49%)
 Frame = +2

Query: 332 VXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQXPX 511
           V TYK  K+VV K +AKR+TW+K G            TT V E++  QF+ S E+ +   
Sbjct: 51  VRTYKISKQVVPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKEDEKAND 110

Query: 512 DXELXGLNPPSSNVXFXCRTCQG 580
                 L  P+ N+   CR C G
Sbjct: 111 P-----LLDPTKNIA-KCRICNG 127


>AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA
           protein.
          Length = 269

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 30/83 (36%), Positives = 41/83 (49%)
 Frame = +2

Query: 332 VXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQXPX 511
           V TYK  K+VV K +AKR+TW+K G            TT V E++  QF+ S E+ +   
Sbjct: 51  VRTYKISKQVVPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKEDEKAND 110

Query: 512 DXELXGLNPPSSNVXFXCRTCQG 580
                 L  P+ N+   CR C G
Sbjct: 111 P-----LLDPTKNIA-KCRICNG 127


>AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-PA
           protein.
          Length = 273

 Score = 45.6 bits (103), Expect = 9e-05
 Identities = 28/86 (32%), Positives = 40/86 (46%)
 Frame = +2

Query: 323 VNXVXTYKXEKRVVSKXMAKRKTWSKXGXXXXXXXXXXXXTTNVXEDVXXQFIXSXEESQ 502
           V  V T+K EK++V K +A+R+ W K G            TT   E++  QFI S +  Q
Sbjct: 46  VKVVRTFKIEKQIVPKAVARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKDFDQ 105

Query: 503 XPXDXELXGLNPPSSNVXFXCRTCQG 580
              + +L     P  N+   CR C G
Sbjct: 106 -THETQL----DPGKNIA-KCRICNG 125


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,611,940
Number of Sequences: 53049
Number of extensions: 209034
Number of successful extensions: 173
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)