Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_A16
(880 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007262-1|AAP35926.1| 686|Homo sapiens cleft lip and palate as... 108 3e-23
BC012359-1|AAH12359.1| 669|Homo sapiens cleft lip and palate as... 108 3e-23
BC004865-1|AAH04865.1| 686|Homo sapiens CLPTM1 protein protein. 108 3e-23
AK223553-1|BAD97273.1| 669|Homo sapiens cleft lip and palate as... 108 3e-23
AF037339-1|AAC98151.1| 669|Homo sapiens cleft lip and palate tr... 108 3e-23
AF037338-1|AAC97420.1| 669|Homo sapiens cleft lip and palate tr... 108 3e-23
>BT007262-1|AAP35926.1| 686|Homo sapiens cleft lip and palate
associated transmembrane protein 1 protein.
Length = 686
Score = 108 bits (259), Expect = 3e-23
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +2
Query: 344 VYFITSMFRQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFD-NSNL 520
++ I+S FR+ AP+ D P APR + N+F T+++++ Y+SE E T+F+ S L
Sbjct: 66 IWAISSWFRRGPAPQ-DQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSAL 124
Query: 521 IWQHSGLVYGDWYSGPNGDGSYSHSASITPSFALKNNGSIYLHVYIVPSGKSPDPNNRQN 700
W+ LVYGDW SG N DG Y H A + +++ NGSIY+HVY SG PDP +
Sbjct: 125 FWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKAL 184
Query: 701 FAGLTSLLRKR 733
+ L ++ R
Sbjct: 185 YRRLATVHMSR 195
>BC012359-1|AAH12359.1| 669|Homo sapiens cleft lip and palate
associated transmembrane protein 1 protein.
Length = 669
Score = 108 bits (259), Expect = 3e-23
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +2
Query: 344 VYFITSMFRQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFD-NSNL 520
++ I+S FR+ AP+ D P APR + N+F T+++++ Y+SE E T+F+ S L
Sbjct: 66 IWAISSWFRRGPAPQ-DQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSAL 124
Query: 521 IWQHSGLVYGDWYSGPNGDGSYSHSASITPSFALKNNGSIYLHVYIVPSGKSPDPNNRQN 700
W+ LVYGDW SG N DG Y H A + +++ NGSIY+HVY SG PDP +
Sbjct: 125 FWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKAL 184
Query: 701 FAGLTSLLRKR 733
+ L ++ R
Sbjct: 185 YRRLATVHMSR 195
>BC004865-1|AAH04865.1| 686|Homo sapiens CLPTM1 protein protein.
Length = 686
Score = 108 bits (259), Expect = 3e-23
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +2
Query: 344 VYFITSMFRQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFD-NSNL 520
++ I+S FR+ AP+ D P APR + N+F T+++++ Y+SE E T+F+ S L
Sbjct: 66 IWAISSWFRRGPAPQ-DQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSAL 124
Query: 521 IWQHSGLVYGDWYSGPNGDGSYSHSASITPSFALKNNGSIYLHVYIVPSGKSPDPNNRQN 700
W+ LVYGDW SG N DG Y H A + +++ NGSIY+HVY SG PDP +
Sbjct: 125 FWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKAL 184
Query: 701 FAGLTSLLRKR 733
+ L ++ R
Sbjct: 185 YRRLATVHMSR 195
>AK223553-1|BAD97273.1| 669|Homo sapiens cleft lip and palate
associated transmembrane protein 1 variant protein.
Length = 669
Score = 108 bits (259), Expect = 3e-23
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +2
Query: 344 VYFITSMFRQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFD-NSNL 520
++ I+S FR+ AP+ D P APR + N+F T+++++ Y+SE E T+F+ S L
Sbjct: 66 IWAISSWFRRGPAPQ-DQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSAL 124
Query: 521 IWQHSGLVYGDWYSGPNGDGSYSHSASITPSFALKNNGSIYLHVYIVPSGKSPDPNNRQN 700
W+ LVYGDW SG N DG Y H A + +++ NGSIY+HVY SG PDP +
Sbjct: 125 FWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKAL 184
Query: 701 FAGLTSLLRKR 733
+ L ++ R
Sbjct: 185 YRRLATVHMSR 195
>AF037339-1|AAC98151.1| 669|Homo sapiens cleft lip and palate
transmembrane protein 1 protein.
Length = 669
Score = 108 bits (259), Expect = 3e-23
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +2
Query: 344 VYFITSMFRQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFD-NSNL 520
++ I+S FR+ AP+ D P APR + N+F T+++++ Y+SE E T+F+ S L
Sbjct: 66 IWAISSWFRRGPAPQ-DQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSAL 124
Query: 521 IWQHSGLVYGDWYSGPNGDGSYSHSASITPSFALKNNGSIYLHVYIVPSGKSPDPNNRQN 700
W+ LVYGDW SG N DG Y H A + +++ NGSIY+HVY SG PDP +
Sbjct: 125 FWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKAL 184
Query: 701 FAGLTSLLRKR 733
+ L ++ R
Sbjct: 185 YRRLATVHMSR 195
>AF037338-1|AAC97420.1| 669|Homo sapiens cleft lip and palate
transmembrane protein 1 protein.
Length = 669
Score = 108 bits (259), Expect = 3e-23
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Frame = +2
Query: 344 VYFITSMFRQPSAPKTDINNPSSAPRAPAVNMFANGTILDMYCYLSEQEFNTNFD-NSNL 520
++ I+S FR+ AP+ D P APR + N+F T+++++ Y+SE E T+F+ S L
Sbjct: 66 IWAISSWFRRGPAPQ-DQAGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSAL 124
Query: 521 IWQHSGLVYGDWYSGPNGDGSYSHSASITPSFALKNNGSIYLHVYIVPSGKSPDPNNRQN 700
W+ LVYGDW SG N DG Y H A + +++ NGSIY+HVY SG PDP +
Sbjct: 125 FWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKAL 184
Query: 701 FAGLTSLLRKR 733
+ L ++ R
Sbjct: 185 YRRLATVHMSR 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,318,898
Number of Sequences: 237096
Number of extensions: 2201982
Number of successful extensions: 8413
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8406
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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