Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_A14
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 110 2e-25
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 67 4e-12
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 49 8e-07
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 40 6e-04
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 39 0.001
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 35 0.018
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 33 0.041
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 31 0.16
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 31 0.22
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.38
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.38
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.5
SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyce... 28 2.0
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.7
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 27 3.5
SPBC28F2.08c |||HRD ubiquitin ligase complex subunit |Schizosacc... 27 3.5
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 3.5
SPAC56F8.13 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 4.7
SPCC2H8.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 27 4.7
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 6.1
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 26 8.1
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 26 8.1
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 110 bits (265), Expect = 2e-25
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 2/171 (1%)
Frame = +1
Query: 178 CNSCDKVIQ-GRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPR 354
C+SC ++ GRI++A KK HP+ F C+TC + ++ F+ +C + + SPR
Sbjct: 258 CHSCGGSLRAGRIISASGKKLHPQCFKCDTCSQNLEHVGFYYREGKFYCHLDYHEQFSPR 317
Query: 355 CHGCGDPITDRVIQALGVSWHA-HHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATR 531
C C PI D+ + +H HHF + + +C CY +K+A +
Sbjct: 318 CKHCKTPIEDQAVHINNDWFHENHHFCAGCSEVFNVNIPCIYRDDLYWCQTCYDNKYAVK 377
Query: 532 CKGCGNPIVDKAIIALDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 684
CK C PI+ ++ D ++H C+TC C + D + ++EN P+C C
Sbjct: 378 CKKCRKPILGISVKGSDGEYHSQCWTCGACNALLGDEGYFMIENTPICRPC 428
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 66.9 bits (156), Expect = 4e-12
Identities = 45/167 (26%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Frame = +1
Query: 157 KVEAPAVCNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVH-----C 321
KV + +C SC +VI G+ V AL +H E F C+ C + F + ++ C
Sbjct: 109 KVSSSKICASCGQVISGQYVRALGNIYHLECFRCHDCNSLVASKFFPIDDPTLNKQVPLC 168
Query: 322 VPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFV-XXXXXXXXXXXXFMEQAGRPYC 498
+ + C CG + I AL +H HF + E G+ YC
Sbjct: 169 ETDYFRRLDLLCASCGMALRGYYITALNKKFHIEHFTCSLCYTVFGPNDSYYEYEGKVYC 228
Query: 499 SDCYADKFATRCKGCGNPIVDKAI----IALDAKWHRDCFTCMKCRN 627
Y+ FA RC GC PI+ + + + WH C K N
Sbjct: 229 HYHYSTLFAARCCGCDGPILRQFVEVYRNGVSQNWHVPCHMIYKFWN 275
Score = 32.3 bits (70), Expect = 0.094
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 532 CKGCGNPIVDKAIIALDAKWHRDCFTCMKCRNPVTDSTFSV 654
C CG I + + AL +H +CF C C + V F +
Sbjct: 116 CASCGQVISGQYVRALGNIYHLECFRCHDCNSLVASKFFPI 156
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 49.2 bits (112), Expect = 8e-07
Identities = 24/67 (35%), Positives = 30/67 (44%)
Frame = +1
Query: 484 GRPYCSDCYADKFATRCKGCGNPIVDKAIIALDAKWHRDCFTCMKCRNPVTDSTFSVMEN 663
GRP CS C A C C I D A+++ +HR+CF C CR + DS F
Sbjct: 67 GRPVCSSC-----AHTCTACRMRIKDYALMSGYDSYHRECFRCHDCRKQIIDSNFKRDNR 121
Query: 664 QPLCGKC 684
C C
Sbjct: 122 TIFCNDC 128
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 178 CNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPR 354
C +C I+ + + +H E F C+ CRK I + F + N + C C H R
Sbjct: 78 CTACRMRIKDYALMSGYDSYHRECFRCHDCRKQIIDSNFKRDNRTIFCNDCKQVRHPSR 136
Score = 35.5 bits (78), Expect = 0.010
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +1
Query: 511 ADKFATRCKGCGNPIVDKAI-IALDAK-WHRDCFTCMKCRNPVTDS---TFSVMENQPLC 675
+ K +T C CG + I+ WH+DCF C KC + S + +P+C
Sbjct: 12 SSKGSTVCFRCGQAFQRRETPISFGGHMWHKDCFCCTKCDKGLEHSDQMLVQTSDGRPVC 71
Query: 676 GKCA 687
CA
Sbjct: 72 SSCA 75
Score = 28.7 bits (61), Expect = 1.2
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 2/121 (1%)
Frame = +1
Query: 151 STKVEAPAVCNSCDKVIQGRI--VTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCV 324
S + VC C + Q R ++ WH + F C C K ++ +
Sbjct: 10 SPSSKGSTVCFRCGQAFQRRETPISFGGHMWHKDCFCCTKCDKGLEHSDQMLVQTSDGRP 69
Query: 325 PCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSD 504
C + H+ C C I D + + S+H F F +C+D
Sbjct: 70 VCSSCAHT--CTACRMRIKDYALMSGYDSYHRECFRCHDCRKQIIDSNFKRDNRTIFCND 127
Query: 505 C 507
C
Sbjct: 128 C 128
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 39.5 bits (88), Expect = 6e-04
Identities = 29/110 (26%), Positives = 59/110 (53%)
Frame = +2
Query: 245 STLSATLAVSQSMEPSSTSTTTGSIACPASPNIIARGAMDAATPSLTV*SKLLACRGTLT 424
S++S+T + S S PSS+STTT + P+S + + + +++ S + S + + +
Sbjct: 130 SSVSSTTSSSSSSSPSSSSTTTTT--SPSSSSSSSSSSSSSSSSSSSS-SSSSSSSSSSS 186
Query: 425 TSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGAEIQSSIKPSS 574
+SS+ + S + S + +VPI + + + S ++ + SS +PSS
Sbjct: 187 SSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSS 236
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 38.7 bits (86), Expect = 0.001
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Frame = +2
Query: 224 LTRNGIPSTLSATLAVSQSMEPSSTS-TTTGSIACPASPNIIARGAMDAATP---SLTV* 391
L+ + IPST S++ + S S+ SS+S T + S +S +II+ + +++P S T+
Sbjct: 235 LSTSSIPSTSSSSSSTSSSLSSSSSSSTASSS---SSSSSIISSSSSSSSSPTSTSSTIS 291
Query: 392 SKLLACRGTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGAEIQSSIKPS 571
S + +TSS + + S + S + ++ +++ +SSP ++ SS PS
Sbjct: 292 SSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPS 351
Query: 572 S 574
S
Sbjct: 352 S 352
Score = 29.9 bits (64), Expect = 0.50
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Frame = +2
Query: 227 TRNGIPSTLSATLAVSQSMEPSSTSTT--TGSIACPASPNIIARGAMDAATPSLTV*SKL 400
T + PS S + + S P+STS++ + S +S + + + + SL+ S
Sbjct: 182 TSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIP 241
Query: 401 LACRGTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGAEIQSSIKPSS 574
+ +TSS++ + S + S + + I+ +++ +SSP + SS SS
Sbjct: 242 STSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSS 299
Score = 29.9 bits (64), Expect = 0.50
Identities = 31/136 (22%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Frame = +2
Query: 173 PSVTAATK*FKAES*RRLTRNGIPSTLSATLAVSQSMEPSSTSTTTGSIACPASPNIIAR 352
P+ T++T + S + S++S++ + S S SS+ST + S + P+S + +
Sbjct: 300 PTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSS-PTSSSSTISSSSSSPSSSSFSST 358
Query: 353 GAMDAATPSL--TV*SKLLACRGTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSP 526
+ ++ S TV S TLT+SS+ +R + + S + + + ++ +S+P
Sbjct: 359 TSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAP 418
Query: 527 LAARGAEIQSSIKPSS 574
+++ +S + SS
Sbjct: 419 VSSAFYHNSTSSRSSS 434
Score = 27.1 bits (57), Expect = 3.5
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = +2
Query: 245 STLSATLAVSQSMEPSSTSTTTGSIACPASPNIIARGAMDAATPSLTV*SKLLACRGTLT 424
ST S+ + + S +PS +ST++ + + A+P + + +++ + S + TLT
Sbjct: 173 STFSSLSSSTSSSQPSVSSTSSSTFSS-AAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLT 231
Query: 425 TS----SAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGAEIQSSIKPSS 574
+S S++ + S + S + + + TA+ +SS + + SS P+S
Sbjct: 232 SSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTS 285
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 34.7 bits (76), Expect = 0.018
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Frame = +2
Query: 248 TLSATLAVSQSMEPSSTSTTTGSIACPA--SPNIIARGAMDAATPSLTV*SKLLACRGTL 421
T S++LA S + +S S T+ S+ + S ++ + ++ S ++ S LA
Sbjct: 86 TSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSIT 145
Query: 422 TTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPL---AARGAEIQSSIKPSS 574
++S A + S ++ S PT++ TSS L AA + SS+ SS
Sbjct: 146 SSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSS 199
Score = 29.5 bits (63), Expect = 0.66
Identities = 26/99 (26%), Positives = 45/99 (45%)
Frame = +2
Query: 227 TRNGIPSTLSATLAVSQSMEPSSTSTTTGSIACPASPNIIARGAMDAATPSLTV*SKLLA 406
T +G+P++ ++T + ++ P+ST T++G P A ++ S V +
Sbjct: 627 TTSGLPTSSASTPLSNSTVAPTSTFTSSGFNTTSGLP---TSSASTPSSNSSIVPTSTFT 683
Query: 407 CRGTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSS 523
G TTS + S + S +APT+T TSS
Sbjct: 684 SSGFNTTSGLPTSSASTPLSNS------TVAPTSTFTSS 716
Score = 28.7 bits (61), Expect = 1.2
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +2
Query: 227 TRNGIPSTLSATLAVSQSMEPSSTSTTTGSIACPASPNIIARGAMDAAT--PSLTV*SKL 400
T +G+P++ ++T + + S+ P+ST T++G P A + +T P+ T S
Sbjct: 658 TTSGLPTSSASTPSSNSSIVPTSTFTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSSG 717
Query: 401 LACRGTLTTSS-AVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGA 544
L TSS + S A S + ++ T T + P G+
Sbjct: 718 FNTTSGLPTSSVSTPLSNSSAYPSSGSSTFSRLSSTLTSSIIPTETFGS 766
Score = 27.1 bits (57), Expect = 3.5
Identities = 22/93 (23%), Positives = 41/93 (44%)
Frame = +2
Query: 245 STLSATLAVSQSMEPSSTSTTTGSIACPASPNIIARGAMDAATPSLTV*SKLLACRGTLT 424
S+LS+T A + + S S++ S + + + ++TP + S A + T
Sbjct: 211 SSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASAT 270
Query: 425 TSSAVDARRSLAVEGSWNRLAVPIAPTATQTSS 523
+SSA SL + + + A + T TS+
Sbjct: 271 SSSAQYNTSSLLPSSTPSSTPLSSANSTTATSA 303
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 33.5 bits (73), Expect = 0.041
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Frame = +2
Query: 137 PAQSCQQRLKPPPSVTAAT----K*FKAES*RRLTRNGIPSTLSATLAVSQSMEPSSTST 304
P + PPP+ T++T + S T IP T ++T V+ ++ P+S+ST
Sbjct: 361 PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSST 420
Query: 305 TTGSIACPASPNIIARGAMDAATPSLTV*SKLLACRGTLTTSSAVDARRSLAVEGSWNRL 484
+ C S ++ +TP T + TS+ V + L
Sbjct: 421 PLTTTNCTTSTSVPYTSTPVTSTPLAT--TNCTTSTSVPYTSTPVTS-TPLTTTNCTTST 477
Query: 485 AVPIAPTATQTSSPLAARGAEIQSSIKPSS 574
++P T TS+PL +S+ +S
Sbjct: 478 SIPYTSTPV-TSTPLTTTNCTTSTSVPYTS 506
Score = 32.3 bits (70), Expect = 0.094
Identities = 29/117 (24%), Positives = 48/117 (41%)
Frame = +2
Query: 173 PSVTAATK*FKAES*RRLTRNGIPSTLSATLAVSQSMEPSSTSTTTGSIACPASPNIIAR 352
P +T +T + S + + +PST S + S S+ P+ S++ + P P
Sbjct: 86 PIITESTSSTSSASTTGSSSSPLPST-STSCTTSTSIPPTGGSSSLSTPITPTVPPTSTS 144
Query: 353 GAMDAATPSLTV*SKLLACRGTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSS 523
P+ T S TTS++ S+ G + L+ PI PT TS+
Sbjct: 145 STSIPIPPTSTS-STDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTST 200
Score = 31.9 bits (69), Expect = 0.12
Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 2/148 (1%)
Frame = +2
Query: 137 PAQSCQQRLKPPPSVTAATK*FKAES*RRLTRNGIPSTLSATLAVSQSMEPSSTSTTTGS 316
P + PPP+ T++T + + +PST S + S S+ P+ STT
Sbjct: 307 PTSTSSTSTPPPPASTSSTG---------TSSSPLPST-STSCTTSTSIPPTGNSTT--- 353
Query: 317 IACPASPNIIARGAMDAATPSLTV*SKLLACRGTLTTSSAVDARRSLAVEGSWNRLAVPI 496
P +P + +TP + + S++ S ++ + N P+
Sbjct: 354 ---PVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNS-TTPV 409
Query: 497 APTA--TQTSSPLAARGAEIQSSIKPSS 574
PT T +S+PL +S+ +S
Sbjct: 410 TPTVPPTSSSTPLTTTNCTTSTSVPYTS 437
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 31.5 bits (68), Expect = 0.16
Identities = 32/124 (25%), Positives = 45/124 (36%), Gaps = 4/124 (3%)
Frame = +1
Query: 148 MSTKVEAPAVCNSC-DKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAK--FHQHN-NGV 315
+ T E C C + V V K WH + F C C K +D + F Q + +
Sbjct: 14 LETPSERTCFCIKCWESVPSTSQVWFGGKCWHSDCFKCVNCNKKLDPSSEDFSQDDQKQI 73
Query: 316 HCVPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPY 495
C C C+GC PI + A+ S A+H F + G+ Y
Sbjct: 74 FCKLCV-----DICNGCSTPICE--FNAVSNS-QANHPCCSNCRAFINSNAFGKFKGQHY 125
Query: 496 CSDC 507
C C
Sbjct: 126 CLPC 129
Score = 29.5 bits (63), Expect = 0.66
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 175 VCNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTK 339
+CN C I + ++ HP C+ CR I+ F + +C+PC K
Sbjct: 81 ICNGCSTPICEFNAVSNSQANHP---CCSNCRAFINSNAFGKFKGQHYCLPCLRK 132
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 532 CKGCGNPIVDKAIIALDAK-WHRDCFTCMKCRNPVTDST 645
C C + + + K WH DCF C+ C + S+
Sbjct: 24 CIKCWESVPSTSQVWFGGKCWHSDCFKCVNCNKKLDPSS 62
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 31.1 bits (67), Expect = 0.22
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 298 QHNNGVHCVPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFV 432
Q+ + + PC + H+ P C C D + ++ I +W AH V
Sbjct: 382 QYGSKIEDTPC-SLHNVPGCFSCFDRLGEKNITETNSNWFAHRLV 425
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 30.3 bits (65), Expect = 0.38
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +2
Query: 236 GIPSTLSATLAVSQSMEPSSTSTTTGSIACPASPNIIARGAMDAATPSLTV*SKLLACRG 415
GI S+ SA+ S + PSS+STT+ S + +S I + T S++ +
Sbjct: 132 GIYSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPI-----SSSITSSISSSASSSVSSS 186
Query: 416 TLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGA 544
+ ++S ++ + + V S N + + T SS A +
Sbjct: 187 SASSSGSISSADAKTVSASSNSTISGFSTSTTSASSSAAGNSS 229
Score = 26.2 bits (55), Expect = 6.1
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 236 GIPSTLSATLAVSQSMEPSSTSTTTGSIACPASPNII-ARGAMDAATP-SLTV*SKLLAC 409
G STL+A+ +S S+T+ S A P+S + + + ++TP S ++ S + +
Sbjct: 119 GSDSTLAASTISGGIYSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSS 178
Query: 410 RGTLTTSSAVDARRSLA 460
+ +SS+ + S++
Sbjct: 179 ASSSVSSSSASSSGSIS 195
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.3 bits (65), Expect = 0.38
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 245 STLSATLAVSQSMEPSSTSTTTG-SIACPASPNIIARGAMDAATPSLTV*SKLLACRGTL 421
S+ +++ + S ++PS+ ++ TG S + A+ ++ AT S T S ++
Sbjct: 950 SSSASSWSSSSEVDPSTAASATGSSTSSIATASVSGSSTSSVATASATDSSTSSIAAASV 1009
Query: 422 TTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGAEIQSSIKPSS 574
T SS + + S + +A A ++ +S +A+ SS+ +S
Sbjct: 1010 TGSSTSSVATASVTDSSTSSVATASATDSSTSSIAVASVTGSSTSSVATAS 1060
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 28.3 bits (60), Expect = 1.5
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Frame = +2
Query: 245 STLSATLAVSQSMEPSSTSTTTGSIACPAS----PNIIARGAMDAATPSLTV*SKLLACR 412
S LS++ A + S SS+ ++ S PAS ++++ + +++ S ++ S A
Sbjct: 47 SMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATL 106
Query: 413 GTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGAEIQSSIKPSSRLT 583
+ +++S + S A+ S + L + + +SS + SS SS +T
Sbjct: 107 TSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPSSSSSYHSSSMT 163
>SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = -1
Query: 669 WLVFHHGECRIGHWIPALHAREAIAMPLSVKRDDGFIDDWISAPLAASGELVCVA 505
W V + R HW A+A +++ GF+ W + + A G + C A
Sbjct: 271 WCVIDFAKNR--HWSVVGFCEGAVAGLVAITPGSGFVPPWAAVVIGALGAVFCYA 323
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 7/30 (23%)
Frame = +3
Query: 384 PCDPSS----W---RVVARSPLRLRWMQEG 452
P DPS W R+VA S +RLRW+++G
Sbjct: 1272 PIDPSEKLGFWDKIRLVAHSQIRLRWLEDG 1301
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +1
Query: 190 DKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSP 351
D + G + + +K +HP+ + +TCRK I + + +H+ P
Sbjct: 2536 DTIPLGEYLDSAHKVYHPKEWSLSTCRKLIAEKQMEDLETRLKVYDLVCRHYRP 2589
>SPBC28F2.08c |||HRD ubiquitin ligase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 713
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 863 HVSLAQCYVYGSPVRFHDILL 801
H+SLA Y YG+P + DI L
Sbjct: 215 HISLATIYQYGTPGKLKDIKL 235
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 311 GSIACPASPNIIARGAMDAATPSLTV*SKLLACRGTLTTSSAVDARRSLAVEGSWNRL 484
G C +++ G ++ + T+ +K CRG + S VDA A+ G N L
Sbjct: 623 GHFTCQECMSMLV-GQKYGSSSTSTIIAKCPMCRGNIVQDSLVDATILQAIHGPLNSL 679
>SPAC56F8.13 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 101
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 96 TQHNTKVKKYKNNHRHNHVN 155
TQ KK KN + HNHVN
Sbjct: 4 TQKKKNEKKTKNPYSHNHVN 23
>SPCC2H8.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 266
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 84 DFKITQHNTKVKKYKNNHRHNHVNKG 161
D IT+ +TK KK K+N N+V G
Sbjct: 107 DVGITKPHTKTKKLKSNSIFNYVRNG 132
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 132 CFYIFLLSCCVVLF*NPRTFCPMAR 58
C ++F L C ++L FCP+ R
Sbjct: 375 CSHVFCLHCLIILQKQKVDFCPLCR 399
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 253 VCNTCRKPIDGAKFHQHNNGVHCVPCFTKH-HSPRCHGCGDPIT 381
+C+TC+K + + ++ C+ C +H +C G DP T
Sbjct: 8 ICSTCQKNASKYRCPRCDSRFCCLECNLEHKRLTKCSGERDPAT 51
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = +3
Query: 66 SDKTYADFKITQHNTKVKKYKNNHRHNHVNK 158
+D + + T N++ +++NH H+H++K
Sbjct: 523 NDDHVSQHEHTHENSQEHHHEHNHNHDHIHK 553
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,461,403
Number of Sequences: 5004
Number of extensions: 68969
Number of successful extensions: 267
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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