Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_A14
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.8  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    22   6.5  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    22   6.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   8.6  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 528 SGELVCVAVGAIGTAS 481
           +GE VC A  A GTAS
Sbjct: 653 AGEYVCTAENAAGTAS 668


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 384 PCDPSSWRVVARSPLRLR 437
           PCDP   R+ + +PL LR
Sbjct: 60  PCDPVGRRLKSLAPLVLR 77


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 384 PCDPSSWRVVARSPLRLR 437
           PCDP   R+ + +PL LR
Sbjct: 60  PCDPVGRRLKSLAPLVLR 77


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 242 PSTLSATLAVSQSMEPSSTSTTT 310
           P+T SA +A S +    +T TTT
Sbjct: 238 PATPSAVVATSNATAAMTTGTTT 260


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 435 RWMQEGAWRW 464
           RW+Q+GA+ W
Sbjct: 171 RWVQQGAFGW 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,323
Number of Sequences: 438
Number of extensions: 4894
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)