Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_A12
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 49 8e-07
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 49 8e-07
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 42 2e-04
SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 29 1.2
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 28 1.6
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 28 2.1
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 28 2.1
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 27 4.8
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 27 4.8
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 49.2 bits (112), Expect = 8e-07
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +3
Query: 237 EQLKPEYLKLNPQHTVPTLVD---DGLSIWESRAIITYLVNKYAKGSSL-YPEDPKARAL 404
EQ PE+L LNP VPTL+D + +IWES AI+ YL +KY + P D
Sbjct: 40 EQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADKYDTERKISLPRDHPEYYK 99
Query: 405 VDQRLYF 425
V Q L+F
Sbjct: 100 VIQYLFF 106
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 49.2 bits (112), Expect = 8e-07
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = +3
Query: 234 GEQLKPEYLKLNPQHTVPTLVD---DGLSIWESRAIITYLVNKY--AKGSSLYPEDPKAR 398
GEQ E+L LNP VPTLVD + +IWES AI+ YL +KY + SL +DP+
Sbjct: 39 GEQKCKEHLALNPNGRVPTLVDHKNNDYTIWESDAILIYLADKYDTDRKISLSFDDPEYY 98
Query: 399 ALVDQRLYF 425
L+ Q L+F
Sbjct: 99 KLI-QYLFF 106
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +3
Query: 249 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLY 422
P Y KL+P P +VDDG++ ES AI+ +LV KY G S P + L L+
Sbjct: 40 PAYTKLSPLGKSPIVVDDGVTYIESAAILEHLVRKY--GPSFKPSEEDVAELEKYELW 95
Score = 33.5 bits (73), Expect = 0.042
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 562 KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETVKSTAPGYQEANEK 726
+Y AG T AD + + + + + K Y N+KRW V S P + A EK
Sbjct: 159 EYFAGEQFTAADPQMCFPIFAAQRDYLSQKPYKNIKRWMRVV-SDRPACRIAAEK 212
>SPCC63.08c |ppk36|atg1|serine/threonine protein kinase
Ppk36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 830
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 462 FYPQVFAGAPADKAKNEKVQEALQLLDKFLERSEVRGRTEPHR 590
F+P+ GAPA +++A Q ++ SE+ GR PHR
Sbjct: 342 FFPKSNPGAPAPPGG--LLRQAFQAQGSSIQPSEITGRRVPHR 382
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 661 NVKRWYETVKSTAPGYQEANEKGLEAFKGLVNSMLKK*T 777
+V + YE+++S Y+ ANEK EA +V+S L + T
Sbjct: 739 SVHKNYESLRSQLLEYKAANEKHTEAILSVVSSTLTENT 777
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -1
Query: 774 SLFKHAIDKSLECLQSFLVGLLVTRSCTLNRLVPS 670
S +K++++ L CL +L+ +TRS T+ + V S
Sbjct: 51 SWYKYSLESGLVCLYLYLIYRWITRSFTVKQTVGS 85
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +1
Query: 559 QKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETVKSTAPGYQEANEKGLEA 738
+KY P L LS A+ S+ S + + WY+ V G E +E EA
Sbjct: 139 EKYGEQPTLAQKKLSNAAAAKSVPGSSSSSSDPMHPQHWYDRVLEGLVGANENSENNREA 198
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 474 VFAGAPADKAKNEKVQEALQLLDKFLERSEVRGRTEPHRRRPESHR 611
+F G P+ A+ Q L ++ FL+ +V R +P+ RP ++
Sbjct: 528 LFEGQPSRDARCNPPQSLLTGMNTFLKNLDVTFRRDPNTLRPRINK 573
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 300 DGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYF 425
+ LSI ESR I + ++ S L+P D K A + RL F
Sbjct: 263 NSLSI-ESRLTIANMTTEWGALSGLFPTDEKLLAWYEDRLKF 303
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,109,828
Number of Sequences: 5004
Number of extensions: 60119
Number of successful extensions: 189
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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