Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_A12
(897 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 54 1e-07
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 51 1e-06
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 51 1e-06
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 49 6e-06
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 48 1e-05
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 46 3e-05
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 45 9e-05
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 44 1e-04
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 44 2e-04
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 41 0.001
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 41 0.002
03_01_0249 - 1935355-1935827,1936129-1936330 40 0.003
05_04_0304 - 20048518-20049003,20049074-20049412 40 0.004
10_08_0807 - 20712066-20712290,20712750-20713339,20713415-207134... 36 0.033
08_02_1570 + 27931057-27931367,27931486-27931550,27931763-279318... 36 0.033
10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041 36 0.058
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 36 0.058
07_01_0489 + 3694562-3695269 35 0.10
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 35 0.10
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 34 0.13
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 34 0.18
01_07_0182 + 41838805-41839152,41839230-41839610 34 0.18
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 33 0.23
01_07_0183 + 41840089-41840394,41840869-41841249 33 0.41
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 32 0.71
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 31 1.6
02_02_0405 + 9885202-9885415,9885515-9885861,9885941-9886516,988... 30 2.9
03_01_0248 - 1932992-1933423,1933440-1933489,1933558-1933606,193... 29 3.8
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890... 29 5.0
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 29 5.0
01_06_1588 + 38474698-38477169 29 5.0
10_06_0046 - 10051197-10051610 29 6.6
01_07_0180 + 41832357-41832680,41833024-41833367,41833789-418339... 29 6.6
10_07_0097 - 12837998-12838336,12839201-12839317,12839737-128398... 28 8.8
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 54.4 bits (125), Expect = 1e-07
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Frame = +3
Query: 234 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--AKGSSLYPEDPKARALV 407
GEQ PE+++ NP +P L D L ++ESRAI Y++ KY +K L D + ALV
Sbjct: 39 GEQNSPEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDIREAALV 98
Query: 408 DQRLYFDIGTLYQRFSDYFYPQVFAGAPADKAKNEK-VQEALQLLDKFLERSEVR 569
D + Y S + + N++ V E+L+ L K LE E R
Sbjct: 99 DVWTEVEAHQYYPALSPIVFECIIFPIMRGVPTNQQVVHESLEKLKKVLETYEAR 153
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 51.2 bits (117), Expect = 1e-06
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Frame = +3
Query: 234 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQ 413
GE P++L NP VP L D L +WESRAI Y+ K K L D K A+VD
Sbjct: 39 GEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRK-NKPELLKDGDLKESAMVDV 97
Query: 414 RLYFDIGTLYQRFSDYFY-----PQVFAGAPADKAKNEKVQEALQLLDKFLERSEVR 569
L + + + P +F GAP D+ + V+E L+ L K LE E R
Sbjct: 98 WLEVESNQYTPALNPILFQCLIRPMMF-GAPPDE---KVVEENLEKLKKVLEVYEAR 150
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 562 KYVAGPNLTVADLSLIASVSSLEASD--IDFKKYANVKRWY 678
KY+AG ++VADLS +A L A+ Y +VK W+
Sbjct: 155 KYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWW 195
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 50.8 bits (116), Expect = 1e-06
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Frame = +3
Query: 237 EQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--AKGSSLYPEDPKARALVD 410
E PE+LK NP +P D L ++ESRA+ Y++ KY ++ + L + A+VD
Sbjct: 40 EHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTEAAMVD 99
Query: 411 QRLYFDIGTLYQRFSDYFYPQVFAGAPADKAKNEK-VQEALQLLDKFLERSEVR 569
+ +I Y S Y +F A N+K V +L+ L K LE E R
Sbjct: 100 IGIEVEIHQYYPVISSIVYECLFNPAMYGVPTNQKVVDNSLEKLKKVLEVYEAR 153
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 48.8 bits (111), Expect = 6e-06
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +3
Query: 234 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARAL 404
GE PE++K+NP VP LVD I +S AI YL +KY + L P+D K +AL
Sbjct: 49 GEHSDPEFMKVNPMKFVPALVDGDAVIGDSYAIALYLEDKYPE-HPLLPQDLKMKAL 104
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 237 EQLKPEYLKLNPQHTVPTLVD-DGLSIWESRAIITYLVNKYAKGSSLYPEDPKARAL 404
EQ PE+ KLNP VP LVD D + +S AI+ YL + Y + L P+DPK +AL
Sbjct: 62 EQSHPEFEKLNPMKYVPALVDGDDTVVVDSFAILLYLEDTYPQ-HPLLPQDPKMKAL 117
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +3
Query: 249 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRL 419
P+Y K+NP VP LVD +I +S AII YL +KY + L P+D K +AL Q L
Sbjct: 44 PDYGKINPIKYVPALVDGDFTISDSLAIILYLEDKYPQ-HPLLPQDLKKKALNMQGL 99
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 44.8 bits (101), Expect = 9e-05
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +3
Query: 237 EQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY-AKGSSLYPE-DPKARALVD 410
E PE+LK NP +P D L ++ESRAI Y++ KY + + L E + + A+VD
Sbjct: 40 EHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVD 99
Query: 411 QRLYFDIGTLYQRFSDYFYPQVFAGAPADKAKNEK-VQEALQLLDKFLERSEVR 569
+ S Y + A N+K V E+ + L K LE E R
Sbjct: 100 VWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEAR 153
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +3
Query: 249 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARAL 404
P+Y K+NP +P LVD L + +S AI YL +KY + +L P+D K +AL
Sbjct: 42 PDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKYPQ-HALLPKDLKKKAL 92
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 228 HHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAK 362
+ G Q P+YLKL P T DD L++ ESR I+ ++ +KYA+
Sbjct: 39 YRGTQRMPQYLKLQPLGEALTFEDDNLTLSESRGILRHIAHKYAR 83
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 565 YVAGPNLTVADLSLIASVSSLEA---SDIDFKKYANVKRWYETVKS 693
Y+AG T+ADLS + + L + S F+ NV RW+ + S
Sbjct: 214 YLAGDKFTIADLSHLPNADRLASDPRSRRMFEARKNVSRWWNNISS 259
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 234 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 356
G+ +PE+L NP +P L D L++++SRAI Y+ KY
Sbjct: 39 GDHRRPEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKY 79
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 556 GQKYVAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYETV 687
G +Y+AG +++ADLS +++ A++ Y +VK W+E +
Sbjct: 155 GSRYLAGDRISLADLSHFSNMRYFMATEYAGVVDAYPHVKAWWEAL 200
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 246 KPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY-AKGSSLYPED 386
+P +L LNP +P L D ++ESRAI Y+ KY A+G+ L P +
Sbjct: 47 QPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGADLLPAE 94
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 234 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYA 359
GE P +LKL P VP D +++ESRAI Y+ ++YA
Sbjct: 40 GEHKSPSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYA 81
>05_04_0304 - 20048518-20049003,20049074-20049412
Length = 274
Score = 39.5 bits (88), Expect = 0.004
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +3
Query: 258 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFDIG 434
L+LNP H VP LV G + ES I+ YL + + + L P DP RAL +F
Sbjct: 53 LRLNPVHKKVPVLVHRGRPLAESVIILQYLDDAWPESRPLLPSDPFDRALARFWCHFADD 112
Query: 435 TLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLERSEVRGR 575
L F G + A ++V + L LL+ L +GR
Sbjct: 113 KLGPAVGAVF---ALTGREQEAAV-QQVHDNLALLEAELREGAFKGR 155
>10_08_0807 -
20712066-20712290,20712750-20713339,20713415-20713463,
20713669-20713821
Length = 338
Score = 36.3 bits (80), Expect = 0.033
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 234 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 356
G + P+YLKL P T D +++ ESR II ++ +KY
Sbjct: 40 GSKRMPQYLKLQPHGEALTFEDGNVTLVESRKIIRHIADKY 80
>08_02_1570 +
27931057-27931367,27931486-27931550,27931763-27931841,
27931992-27932010,27932091-27932210,27932557-27932626,
27932709-27932752,27932918-27932959,27933033-27933092,
27933413-27933470,27934718-27935376
Length = 508
Score = 36.3 bits (80), Expect = 0.033
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 231 HGEQLKPEYLKLNPQHTVPTLVDD--GLSIWESRAIITYLVNKYAKGS 368
+G +P+ L++ + P +VD G++++ES AII YL +KY G+
Sbjct: 178 NGPTFRPKVLEMGGKQQFPYMVDPNTGVAMYESDAIIKYLADKYGDGT 225
>10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041
Length = 279
Score = 35.5 bits (78), Expect = 0.058
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 258 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKY--AKGSSLYPEDP 389
L NP H VP L+ +G I ESR I+ Y++++ G++L P DP
Sbjct: 67 LASNPVHKKVPVLIHNGKPICESRIILEYIIDEVFPVDGAALLPADP 113
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 35.5 bits (78), Expect = 0.058
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Frame = +3
Query: 234 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQ 413
GE +L +P +P D ++++ESRAI Y++ Y K L + + A+VD
Sbjct: 38 GENRSRHHLARSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEESAMVDM 97
Query: 414 RL-----YFDIGTLYQRFSDYFYPQVFAGAPADKA---KN-EKVQEALQLLDKFLERSE 563
+ ++D ++ + + G D+A +N EK+++ L++ ++ L SE
Sbjct: 98 WMEVEAHHYD-PAIFHIIRECVIKPMIGGGARDQAIVDENVEKLRKVLEVYERRLSESE 155
>07_01_0489 + 3694562-3695269
Length = 235
Score = 34.7 bits (76), Expect = 0.10
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 258 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKY---AKGSSLYPEDPKARAL 404
L NP H VP L+ I ES+ I+ YL + + A G L P DP ARA+
Sbjct: 54 LASNPVHKKVPVLLHRSNPICESQVIVQYLDDAFPGGAAGGDLLPSDPHARAV 106
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 34.7 bits (76), Expect = 0.10
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 237 EQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNK 353
E PE+ NP VP L D L ++ESRAI Y++ K
Sbjct: 39 EHKSPEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK 77
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 249 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLY 422
PEYLK+NP VP L ++ES AI Y+++ SS +PE ++++ D LY
Sbjct: 604 PEYLKMNPIGKVPILETPDGPVFESNAIARYVLS-----SSHFPEVTRSKS--DNPLY 654
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 249 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVN 350
PE+LK+NP +P L ++ES AI Y+++
Sbjct: 43 PEFLKMNPIGKIPVLETPDGPVFESNAIARYVLS 76
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 33.9 bits (74), Expect = 0.18
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Frame = +3
Query: 237 EQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAK--GSSLYPEDPKARALVD 410
E PE++KL T ++ +SRAI YL ++ ++Y RA ++
Sbjct: 41 EHKLPEFIKLRDPTGQVTFKHGDKTLVDSRAICRYLSTQFPDDGNRTIYGTGSLERASIE 100
Query: 411 QRLYFDIGTLYQRFSDYFYPQVFA---GAPADKAK---NE-KVQEALQLLDKFLERSE 563
Q L + + S+ + FA PAD+A+ NE K+Q+ L + D+ L +++
Sbjct: 101 QWLQAEAQSFDAPSSELVFHLAFAPQLNIPADEARIAENERKLQQMLNVYDEILAKNK 158
>01_07_0182 + 41838805-41839152,41839230-41839610
Length = 242
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 258 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARA 401
L NP H VP L+D G +I ES I+ Y+ + + G + P DP RA
Sbjct: 45 LASNPVHKKVPVLLDGGRAICESLVIVEYVDDAF-DGPPILPADPYDRA 92
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 249 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFD 428
PE+LK+NP +P L +++ES AI Y V + SSL + ++Q + F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARY-VARLKDNSSLCGSSLIDYSHIEQWMDFS 125
Query: 429 IGTLYQRFSDYFYPQVFAG 485
+ + YP++ G
Sbjct: 126 ATEVDANIGRWLYPRLGFG 144
>01_07_0183 + 41840089-41840394,41840869-41841249
Length = 228
Score = 32.7 bits (71), Expect = 0.41
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 267 NPQHT-VPTLV-DDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARA 401
NP H VP L+ DG S+ ES ++ Y+ + + G L P DP ARA
Sbjct: 45 NPVHKLVPVLLHSDGRSVAESLVVVQYVDDAF-HGPPLLPADPYARA 90
>04_04_0466 + 25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 31.9 bits (69), Expect = 0.71
Identities = 25/97 (25%), Positives = 42/97 (43%)
Frame = +3
Query: 288 TLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFDIGTLYQRFSDYFY 467
T+ D+G SI E + LV+++ KG E + R D L Q D++Y
Sbjct: 792 TIDDEGDSIGEYTPDV--LVSEFMKGEKQLVEKLLQTEINLLRSIRDGSALMQHMEDFYY 849
Query: 468 PQVFAGAPADKAKNEKVQEALQLLDKFLERSEVRGRT 578
+ G + ++ QE LQ ++ ++ GRT
Sbjct: 850 VTLLEGYCRSASLADRYQETLQTMEPVQDQFRGYGRT 886
>11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 237 EQLKPEYLKLNPQHTVPTLVDDGLSIWE 320
E L PE+ K+NP VP +VD ++E
Sbjct: 41 EHLSPEFKKINPMGQVPAIVDGRFRLFE 68
>02_02_0405 +
9885202-9885415,9885515-9885861,9885941-9886516,
9886599-9887003
Length = 513
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +1
Query: 577 PNLTVADLSLIASVSS-LEASDIDFKKYANVKR-----WYETVKSTAPGYQEANEKGLEA 738
P L D LI + + ++ S+ ++K + KR W TVK A G E K L+
Sbjct: 177 PALRKLDAMLIGYMDNFVDQSEFWYEKGGDNKRDDDKWWMPTVKVPAEGLSEVTRKWLQY 236
Query: 739 FKGLVNSMLK 768
K VN +LK
Sbjct: 237 QKECVNQVLK 246
>03_01_0248 -
1932992-1933423,1933440-1933489,1933558-1933606,
1933688-1933840
Length = 227
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 562 KYVAGPNLTVADLSLIASVSSLEASDIDFKKYA---NVKRWYETV 687
+Y+AG T+ADLS + + + +S+ K + NV RWY+ +
Sbjct: 162 EYLAGDEFTLADLSHLPNSHYIVSSERGRKLFTGRKNVARWYDQI 206
>07_03_1580 +
27888275-27888360,27888755-27888871,27888964-27889045,
27889710-27889821,27889958-27890071,27890163-27890326
Length = 224
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 556 GQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 687
G+ YV+G ++ D+ + A+V S ++ + N RWY+TV
Sbjct: 23 GKTYVSGNAISKDDIKVFAAVPSKPGAE-----FPNAARWYDTV 61
>04_01_0123 -
1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 176 ADGEGAQLKPEPQTGRPTPRGTAQTRIFEVEPSTHGPDPSRRWSFNLGVPRHH 334
A+GE + + PQ P PRGT R +G +RR N+ R H
Sbjct: 266 ANGEDPERRESPQRATPPPRGTGDLR-----DQINGRQEARRTRDNVNRSRRH 313
>01_06_1588 + 38474698-38477169
Length = 823
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = -1
Query: 699 SCTLNRLVPSLNVGVFLEVNVRGFQAGDTGDETQVGDGEVRSGHVLLTFRGTCPAAEGLP 520
S + V + GV L VRG + D ++ VGD E+ ++ R EGL
Sbjct: 704 SLPITEKVDVYSYGVVLLELVRGARMADLATDS-VGDAEIAMRQLVWKIR------EGLK 756
Query: 519 VPSRSWPCRLGHRRILG 469
+ R+W L RR+ G
Sbjct: 757 IGDRTWVISLVDRRLNG 773
>10_06_0046 - 10051197-10051610
Length = 137
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 161 LQGCTADGEGAQLKPEPQTGRPTP 232
++GCT + G Q+ P P T PTP
Sbjct: 21 VRGCTPNCSGEQVVPTPPTAVPTP 44
>01_07_0180 +
41832357-41832680,41833024-41833367,41833789-41833945,
41834119-41834430,41834537-41834908
Length = 502
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 258 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARAL 404
L NP H VP L+ S+ ES I+ Y+ + G + P DP RA+
Sbjct: 320 LNHNPVHKLVPVLLHGDRSLSESLVILEYIDESF-HGPPILPTDPYDRAV 368
>10_07_0097 -
12837998-12838336,12839201-12839317,12839737-12839868,
12840656-12840907
Length = 279
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 285 PTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRL 419
PT+++D L ++ + L N ++ +YP DPKA+ VD L
Sbjct: 160 PTVMED-LQALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDDL 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,118,423
Number of Sequences: 37544
Number of extensions: 443416
Number of successful extensions: 1273
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -