Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P23
         (933 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    27   0.28 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   3.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   3.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   5.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   7.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 26.6 bits (56), Expect = 0.28
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 351 DKKEVWSG-AGSATSAAFK-VKKGGRYQMQVELCNSDGCSSSEGVE 482
           +K E++    G  T++ F+ VK G  Y +    C+S GCS     E
Sbjct: 317 NKTEIFLNITGDKTNSVFEHVKLGSLYHISFMACSSAGCSQKVAEE 362


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/35 (25%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 19  LTIVEFLKILMFGSWI-VEARLTFTLFAFL*NQLW 120
           L I+  + +  +GSWI  E++L+  L +++  +++
Sbjct: 327 LLILRLVSVCFYGSWINEESKLSLDLLSYVPREVY 361


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 191 FPWRAAGADGERGHREYERYHPM 123
           +PW  +  + +RG + Y RY  +
Sbjct: 233 YPWMRSQFERKRGRQTYTRYQTL 255


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 191 FPWRAAGADGERGHREYERYHPM 123
           +PW  +  + +RG + Y RY  +
Sbjct: 235 YPWMRSQFERKRGRQTYTRYQTL 257


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 279 DAADVSVNWNVWTGDAA 329
           D +   V WN W G+A+
Sbjct: 104 DESKCDVFWNCWNGEAS 120


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 279 DAADVSVNWNVWTGDAA 329
           D +   V WN W G+A+
Sbjct: 104 DESKCDVFWNCWNGEAS 120


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 346 RTLDLSAASPVHTFQLTETSAASFLVTS 263
           RTLD  AAS +++F    T + SF  T+
Sbjct: 229 RTLDGMAASKLNSFHWHITDSHSFPFTA 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,506
Number of Sequences: 336
Number of extensions: 3546
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)