Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_P21
(908 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 274 1e-74
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 234 1e-62
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 134 2e-32
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 130 3e-31
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 130 4e-31
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 124 1e-29
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 124 2e-29
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 113 4e-26
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 97 2e-21
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 94 2e-20
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 78 2e-15
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 75 2e-14
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 74 2e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 72 1e-13
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 69 7e-13
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 69 9e-13
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 68 2e-12
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 66 6e-12
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 37 0.005
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 36 0.006
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 34 0.032
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 33 0.074
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 32 0.13
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 31 0.23
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 31 0.23
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 31 0.30
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 30 0.39
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.91
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 28 1.6
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 28 1.6
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 27 2.8
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 27 2.8
SPAC4H3.06 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 4.9
SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|c... 26 8.5
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 274 bits (671), Expect = 1e-74
Identities = 125/195 (64%), Positives = 161/195 (82%), Gaps = 2/195 (1%)
Frame = +2
Query: 146 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 325
M+ +KK LLKVIILG+SGVGKTS+MNQ+VN+KFS YKATIGADFLTKEV+VDD++VT+Q
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Query: 326 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 505
+WDTAGQERFQSLGVAFYRGADCCVLV+DV +F++L+SWRDEFLIQASP +P+ FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPF 120
Query: 506 VILGNKVDLD--NRAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTIARNALAQET 679
++LGNKVD++ R VS + +CQ++ +IPYFETS KEA+NV+ AF+T+A+ AL
Sbjct: 121 ILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMD 180
Query: 680 EAELYNEFPDQIKLN 724
++ +F D I L+
Sbjct: 181 SDDIAADFTDPIHLD 195
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 234 bits (573), Expect = 1e-62
Identities = 113/198 (57%), Positives = 154/198 (77%), Gaps = 5/198 (2%)
Frame = +2
Query: 146 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 325
MS++K++ LKV+ILGDSGVGKT LMNQFVN+KFS +YKATIGADFLTK+V+VDD++VT+Q
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 326 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 505
+WDTAGQERFQSLG+AFYRGADCCV+V++V +F S+E+WR EFL Q S +D FPF
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS-QDECAFPF 119
Query: 506 VILGNKVDLD--NRAVSVKRGQQWCQSK--NDIPYFETSVKEAVNVELAFQTIARNALAQ 673
+I+GN++D D RAVS+ R +C+SK +++ +FE S KE NV F+T++R AL
Sbjct: 120 IIVGNQIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALEN 179
Query: 674 ETEA-ELYNEFPDQIKLN 724
E+ + N+F + + L+
Sbjct: 180 ESSRDDFVNDFSEPLLLS 197
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 134 bits (323), Expect = 2e-32
Identities = 64/163 (39%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +2
Query: 167 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 346
L K +++GDSGVGK++L+ +F +F+ + K+TIG +F T+ +++D++ + QIWDTAGQ
Sbjct: 10 LFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQ 69
Query: 347 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 526
ER++++ A+YRGA ++V+D+T ++F ++ W E A N +++GNK
Sbjct: 70 ERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHAD----SNIVIMLVGNKT 125
Query: 527 DLDN-RAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTI 652
DL + RAVS + Q + ++N++ + ETS +A NVE AFQT+
Sbjct: 126 DLLHLRAVSTEEAQAFA-AENNLSFIETSAMDASNVEEAFQTV 167
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 130 bits (314), Expect = 3e-31
Identities = 66/163 (40%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
Frame = +2
Query: 173 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 352
K++ LG+ VGKTSL+ +F+ +F N Y+ATIG DFL+K + ++DR V +Q+WDTAGQER
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 72
Query: 353 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 532
F+SL ++ R + ++V+D+T N+F + E W ++ + D+ V++GNK DL
Sbjct: 73 FRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERG----DDVIIVLVGNKTDL 128
Query: 533 -DNRAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTIAR 658
D R V+ + G++ + I + ETS K NV+L F+ IA+
Sbjct: 129 ADKRQVTQEEGEKKAKELK-IMHMETSAKAGHNVKLLFRKIAQ 170
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 130 bits (313), Expect = 4e-31
Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 1/183 (0%)
Frame = +2
Query: 167 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 346
L+K++++GDSGVGK+ L+ +F F+ + TIG DF + + +D + + +QIWDTAGQ
Sbjct: 9 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 68
Query: 347 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 526
ERF+++ A+YRGA +L++DVT +F ++ +W AS +N +++GNK
Sbjct: 69 ERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHAS----ENVYKILIGNKC 124
Query: 527 DL-DNRAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTIARNALAQETEAELYNEF 703
D D R VS ++GQ + + E S K VNV+ AF T+AR Q+ +AE NEF
Sbjct: 125 DCEDQRQVSFEQGQALADELG-VKFLEASAKTNVNVDEAFFTLAREIKKQKIDAE--NEF 181
Query: 704 PDQ 712
+Q
Sbjct: 182 SNQ 184
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 124 bits (300), Expect = 1e-29
Identities = 63/172 (36%), Positives = 107/172 (62%), Gaps = 1/172 (0%)
Frame = +2
Query: 146 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 325
M+ L K++++GDSGVGK+ L+ +F + ++ Y +TIG DF + ++ + V +Q
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 326 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 505
IWDTAGQERF+++ ++YRGA ++V+DVT ++F +++ W E A +
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA----VEGVNR 116
Query: 506 VILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTIAR 658
+++GNK D+ D + V +++ S N IP+ ETS K++ NVE AF T++R
Sbjct: 117 LLVGNKSDMVDKKVVEYSVAKEFADSLN-IPFLETSAKDSTNVEQAFLTMSR 167
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 124 bits (299), Expect = 2e-29
Identities = 66/165 (40%), Positives = 102/165 (61%), Gaps = 3/165 (1%)
Frame = +2
Query: 173 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRI-VTMQIWDTAGQE 349
K+++LGDS VGK+SL+ +FV +F + ++TIGA FLT+ + +D+ V ++IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 350 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 529
R++SL +YR A+C ++V+D+T + + +SW E QA P+ + GNK+D
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQA----PEGIVIALAGNKLD 131
Query: 530 L--DNRAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTIAR 658
L + RAV + + N + +FETS K A NV F IA+
Sbjct: 132 LAQERRAVEKADAEAYAAEAN-LLFFETSAKTAENVNELFTAIAK 175
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 113 bits (271), Expect = 4e-26
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 5/174 (2%)
Frame = +2
Query: 167 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV----DDRIVTMQIWD 334
L+K+++ G SG GK+ L+ +FV ++ +Q T+G DF ++ + V + + +QIWD
Sbjct: 9 LVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWD 68
Query: 335 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 514
TAGQE+F+S+ +YRGA VLV+DVT ++F+ L SW + A P V+
Sbjct: 69 TAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMA----PSTICVVLA 124
Query: 515 GNKVDLDN-RAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTIARNALAQ 673
G+K DL N R VS + ++C K+ ETS NVE F ++ + +
Sbjct: 125 GSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITR 178
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 97.5 bits (232), Expect = 2e-21
Identities = 54/163 (33%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Frame = +2
Query: 173 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 352
K++++GD GVGK++L Q + F ++Y TI D K+ +D + + DTAGQE
Sbjct: 10 KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTI-EDSYRKKCEIDGEGALLDVLDTAGQEE 68
Query: 353 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 532
+ ++ + R + +LV+++T+ ++F + ++ + L +D D FP V++ NK DL
Sbjct: 69 YSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQIL---RVKDKDTFPVVLVANKCDL 125
Query: 533 D-NRAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTIAR 658
+ R VS G+Q +S + + Y ETS K +NVE AF ++ R
Sbjct: 126 EAERVVSRAEGEQLAKSMHCL-YVETSAKLRLNVEEAFYSLVR 167
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 94.3 bits (224), Expect = 2e-20
Identities = 50/162 (30%), Positives = 84/162 (51%)
Frame = +2
Query: 173 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 352
K++++GD G GKT+ + + + +F +Y AT+G + + + +WDTAGQE+
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 353 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 532
L +Y C +++FDVT+ T+K++ W + + R +N P V+ GNKVD+
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLV-----RVCENIPIVLCGNKVDV 125
Query: 533 DNRAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTIAR 658
R V K K ++ Y++ S K N E F +AR
Sbjct: 126 KERKVKAK--AITFHRKKNLQYYDISAKSNYNFEKPFLWLAR 165
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 77.8 bits (183), Expect = 2e-15
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Frame = +2
Query: 140 CKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVT 319
C S +K + K++ILGD GKTSL+N F F Y+ TI +++ ++ VD +
Sbjct: 4 CFGSKKKPIYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYI-HDIFVDGNSIE 62
Query: 320 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 499
+ +WDTAGQE + L Y ++ F V + + SLE+ ++L + S P
Sbjct: 63 LSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRD---SLENVITKWLPEVSSNCP-GV 118
Query: 500 PFVILGNKVDL---------DNRAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTI 652
V++ K DL ++ + + G + N + Y E S K V AF
Sbjct: 119 KLVLVALKCDLRGADEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEA 178
Query: 653 ARNALAQE 676
AR ALA +
Sbjct: 179 ARVALAAQ 186
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 74.5 bits (175), Expect = 2e-14
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Frame = +2
Query: 143 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI-VDDRIVT 319
K S+ + K++++GD G GKT L+ F + F +Y T+ +++T + +++
Sbjct: 6 KSGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIE 65
Query: 320 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDN 496
+ +WDTAGQE + L Y ++ +L F + P + ++ E W E + PR
Sbjct: 66 LALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPE-VQHFCPRT--- 121
Query: 497 FPFVILGNKVDL--DNRAVSVKRGQ-------QWCQS---KNDIPYFETSVKEAVNVELA 640
P V++G K DL D A V R Q Q QS + PY E S KE V
Sbjct: 122 -PIVLVGLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEV 180
Query: 641 FQ 646
FQ
Sbjct: 181 FQ 182
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 74.1 bits (174), Expect = 2e-14
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Frame = +2
Query: 161 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 340
+L K++I+GD GKT L+ F F Y T+ +++ +V VD R + + +WDTA
Sbjct: 4 ELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHIELALWDTA 62
Query: 341 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILG 517
GQE + L Y + ++ F V AP + ++ E W E L S N P +++G
Sbjct: 63 GQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCS-----NLPILLVG 117
Query: 518 NKVDLDN-------------RAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTIAR 658
KVDL N + ++ + GQ Q Y E S K V F+T AR
Sbjct: 118 CKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
Query: 659 NAL 667
++
Sbjct: 178 ASM 180
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 71.7 bits (168), Expect = 1e-13
Identities = 39/128 (30%), Positives = 75/128 (58%)
Frame = +2
Query: 173 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 352
K++++GD GKTSL++ F F +Y T+ ++++ + VD + V + +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAGQEE 68
Query: 353 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 532
++ L Y A ++ F + +P+ SLE+ +++ + + P N PF+++G K DL
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPD---SLENVSTKWIEEINTLCP-NVPFILVGMKADL 124
Query: 533 DNRAVSVK 556
+ V+++
Sbjct: 125 RSDPVAIE 132
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 69.3 bits (162), Expect = 7e-13
Identities = 30/99 (30%), Positives = 54/99 (54%)
Frame = +2
Query: 155 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWD 334
+ + +KV ++GDS +GKTSLM +V F + T+G +F+ K + + + +T IWD
Sbjct: 6 KNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWD 65
Query: 335 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW 451
GQ F ++ A + +FD++ +T S++ W
Sbjct: 66 LGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEW 104
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 68.9 bits (161), Expect = 9e-13
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +2
Query: 173 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 352
++ +LG VGK+SL Q+V F Y TI F +K + + +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDE 66
Query: 353 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 532
+ L G VLV+ +T+ ++F+ ++ RD+ L + + P V++GNK DL
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKIL---NHTGTEWVPIVVVGNKSDL 123
Query: 533 D-NRAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTI 652
RAV+ + G+ ++ + E S + NV AF+ I
Sbjct: 124 HMQRAVTAEEGKA-LANEWKCAWTEASARHNENVARAFELI 163
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 67.7 bits (158), Expect = 2e-12
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +2
Query: 170 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 349
+K +++GD VGKT L+ + KF + Y T+ ++ V++ D T+ ++DTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVT-VMIGDEPYTLGLFDTAGQE 62
Query: 350 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKV 526
+ L Y D ++ F VT+P +F+++ E W E + P P +I+G ++
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPE-VHHHCP----GVPCLIVGTQI 117
Query: 527 DL-DNRAVSVKRGQQ 568
DL D+ +V K +Q
Sbjct: 118 DLRDDPSVQQKLARQ 132
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 66.1 bits (154), Expect = 6e-12
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 10/179 (5%)
Frame = +2
Query: 161 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 340
+L K++I+GD GKT L+ F F Y T+ +++ +V VD R V + +WDTA
Sbjct: 4 ELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHVELALWDTA 62
Query: 341 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDE---------FLIQASPRDP 490
GQE + L Y + ++ F V +P++ ++ E W E L+ A D
Sbjct: 63 GQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADL 122
Query: 491 DNFPFVILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSVKEAVNVELAFQTIARNAL 667
N P I+ + V+ + GQ Q Y E S K V F++ R A+
Sbjct: 123 RNDP-KIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAM 180
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 36.7 bits (81), Expect = 0.005
Identities = 30/121 (24%), Positives = 51/121 (42%)
Frame = +2
Query: 170 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 349
+++++LG GKT+++ K NQ TI E + I +WD GQ+
Sbjct: 22 MRILMLGLDAAGKTTILY----KLKLNQSVVTIPTVGFNVETVTYKNI-KFNVWDVGGQD 76
Query: 350 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 529
+ + L ++ G + V D N + R E S R+ + ++L NK D
Sbjct: 77 KIRPLWRHYFTGTKGLIFVVDSADSN---RISEARQELHRIISDREMRDCLLLVLANKQD 133
Query: 530 L 532
L
Sbjct: 134 L 134
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 36.3 bits (80), Expect = 0.006
Identities = 23/112 (20%), Positives = 48/112 (42%)
Frame = +2
Query: 137 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIV 316
+ + K+ ++V++LG GKT+++ +N+ N+ T G T EV +
Sbjct: 6 ILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDV-NEVSPTFGFQIRTLEV----EGL 60
Query: 317 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ 472
IWD GQ+ ++ ++ + + V D + + E L++
Sbjct: 61 RFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVE 112
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 33.9 bits (74), Expect = 0.032
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Frame = +2
Query: 173 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGA--DFLTKEVIVDDRIVTMQIWDTAGQ 346
KV+++G SG GK+S M V + + +GA D V +V + +WD GQ
Sbjct: 4 KVLLMGRSGSGKSS-MRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQ 61
Query: 347 ERFQSLGVA-----FYRGADCCVLVFDVTAPNTFKSLESWRD--EFLIQASPR 484
E F ++ +R + VFDV + + L ++R+ E + SP+
Sbjct: 62 EAFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQ 114
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 32.7 bits (71), Expect = 0.074
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = +2
Query: 140 CKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVT 319
CK RK + V ILG S GK+SL+N N++ S G EV+VD
Sbjct: 232 CKEVLRKGI--NVAILGPSNAGKSSLINLLANRRIS-IVSPQSGTTRDAIEVLVDINGFP 288
Query: 320 MQIWDTAG 343
+ + DTAG
Sbjct: 289 VLLSDTAG 296
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 31.9 bits (69), Expect = 0.13
Identities = 24/123 (19%), Positives = 55/123 (44%)
Frame = +2
Query: 170 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 349
++++++G GKT+++ + + TIG + T V+ R ++ +WD GQ+
Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVET----VEYRNISFTVWDVGGQD 72
Query: 350 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 529
+ + L +++ + V D N + + +E + + + ++ NK D
Sbjct: 73 KIRPLWRHYFQNTQGIIFVVD---SNDRERISEAHEELQRMLNEDELRDALLLVFANKQD 129
Query: 530 LDN 538
L N
Sbjct: 130 LPN 132
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 143 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNK 238
K SS+K + L ++++GD G+G+T+ +N K
Sbjct: 44 KKSSKKGIPLNLMVVGDVGLGRTAFINTLCEK 75
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 155 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLT-KEVIVD-DRIVTMQI 328
R + + +I++G+S +GKT+ +N F+ +N ++ DF+ K + D D+ + I
Sbjct: 114 RNGIDINLIVVGESSLGKTTFVNSFLQSNDTN-FRPKKTMDFVEHKATLSDGDQKFNLTI 172
Query: 329 WDTAG 343
DT G
Sbjct: 173 VDTPG 177
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 155 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 280
R+ V++LG+SG GK++L+N +N+ + ++ DF
Sbjct: 91 RQGFNFNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDF 132
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 30.3 bits (65), Expect = 0.39
Identities = 27/119 (22%), Positives = 55/119 (46%)
Frame = +2
Query: 173 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 352
K++ LG GKT+L++ N + + + T+ ++E+ + + V +D G ++
Sbjct: 22 KMLFLGLDNAGKTTLLHMLKNDRLAVM-QPTLHPT--SEELAIGN--VRFTTFDLGGHQQ 76
Query: 353 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 529
+ L ++ + V + D F+ L + E + + PF+ILGNK+D
Sbjct: 77 ARRLWRDYFPEVNGIVYLVDCC---DFERLSESKAELDALLAMEELARVPFLILGNKID 132
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 29.1 bits (62), Expect = 0.91
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Frame = +2
Query: 143 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR-IVT 319
K+S + + ++G GKT+L++ F+N +N + T + E R +V
Sbjct: 413 KVSKYDRNVFLCFVVGSKSCGKTALLSSFIN---NNTNRLTPNTVVNSVEFQSTQRYLVL 469
Query: 320 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 499
+I +T + + D L++D + PN+F + + L+ P D
Sbjct: 470 SEIGETDLDILAEPKSL---EACDILCLLYDSSNPNSFSFIAN-----LLNLYP-DLQKI 520
Query: 500 PFVILGNKVDLDNR 541
P V K DLD +
Sbjct: 521 PCVFAATKADLDRQ 534
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +2
Query: 170 LKVIILGDSGVGKTSLMNQFVNK 238
++V+I GD GVGK+SL++ + +
Sbjct: 4 VRVVICGDQGVGKSSLISALIQE 26
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 143 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD 277
K+ SR + +++ G+SG+GKT+ F N FS K+ +G +
Sbjct: 20 KIVSRNGVAFTLMLCGESGLGKTT----FCNTLFSTTIKSHMGPE 60
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 317 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPN 427
T +IWD +++ +L V + G D VL ++ PN
Sbjct: 315 TFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPN 351
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 432 NVLGAVTSKTNTQQSAPR*KATPSDWNRSWPAVSHICIVTILSSTITSFVRK 277
N L + S TNT + + T S+WN +SH + +L + IT F +K
Sbjct: 129 NQLSVIRSSTNTVKGRKKNPTTNSNWN----GISH--VNALLDAIITLFQKK 174
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 131 KLLCKMSSRKKLL--LKVIILGDSGVGKTSLMNQFVNK 238
K L S++KKL L V ++G VGK+S++N VN+
Sbjct: 255 KSLKSYSAKKKLKSSLTVGVIGYPNVGKSSVINALVNR 292
>SPAC4H3.06 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 644 QTIARNALAQETEAELYNEFPDQIKLN 724
+T+ + AQET A+LY E D + N
Sbjct: 3 ETVNKILRAQETRAQLYKELEDALNAN 29
>SPBC1683.03c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -3
Query: 327 ICIVTILSSTITSFVRKSAPIVALYWLENFL 235
I +V++++ T+ + + +API YW + F+
Sbjct: 373 IMVVSMIAFTVGTILIATAPIHQTYWAQTFV 403
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,513,791
Number of Sequences: 5004
Number of extensions: 72839
Number of successful extensions: 276
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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