Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P19
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    41   1e-05
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    27   0.20 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   1.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   1.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   1.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   2.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   7.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   7.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   7.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   7.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   7.5  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 41.1 bits (92), Expect = 1e-05
 Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 18/172 (10%)
 Frame = +1

Query: 133 EIDLVDKGISSLEEIPGLFSLENITRLSLSHNKISVVPXXXXXXXXXXXXXXXXXXXXXX 312
           +I L D  I SLE      +L+++ RL+L  NKI+ +                       
Sbjct: 120 QIHLDDNRIESLER-RAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISS 178

Query: 313 PV-----SLSSLPKLRILNVSLNKLYNL----------PRGFGSFPVLEILDLTYNNLNE 447
                   + SL    + N+S NKL NL            G G    +++LDL++NN+  
Sbjct: 179 LDFNIFDQVGSLGMFHV-NMSHNKLINLVVAPSVPFEQDTGLGGLQNIKVLDLSFNNITS 237

Query: 448 KVLPGNFF--IMDSLRALYLGDNDFEFLPPEI-GNLKNLQILSMRENDLIEV 594
             +   FF  +  SL  LYLG N       ++ GN+ +LQ+L +  N L E+
Sbjct: 238 --VAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYEL 287



 Score = 35.9 bits (79), Expect = 4e-04
 Identities = 48/160 (30%), Positives = 68/160 (42%), Gaps = 2/160 (1%)
 Frame = +1

Query: 124 NNPEIDLVDKGISSLEEIPGLFSLENITRLSLSHNKISVVPXXXXXXXXXXXXXXXXXXX 303
           +N  I+LV       E+  GL  L+NI  L LS N I+ V                    
Sbjct: 199 HNKLINLVVAPSVPFEQDTGLGGLQNIKVLDLSFNNITSVAKQFFR-------------- 244

Query: 304 XXXPVSLSSLPKLRILNVSLNKLYNLPRG-FGSFPVLEILDLTYNNLNEKVLPGNFFIMD 480
              PV LS    L  L +  NKL N  +  FG+ P L++LDL++N+L E      F    
Sbjct: 245 ---PVELS----LMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDF-DTFRNTK 296

Query: 481 SLRALYLGDNDFEFLPPEIGN-LKNLQILSMRENDLIEVP 597
            L+ L    N    +P ++   L NL+I+    N L  +P
Sbjct: 297 KLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLP 336



 Score = 33.1 bits (72), Expect = 0.003
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
 Frame = +1

Query: 319 SLSSLPKLRILNVSLNKLYNLPRGFGSFPVLE--ILDLTYNNLNEKVLPGNFFIMDSLRA 492
           +   +P+L  LN+  N    L     SF  LE  +L L  +N++   +P       +L +
Sbjct: 413 TFKGIPRLASLNLGHNSQLTLEINGLSFQGLEYTLLHLNLDNVSLSQVPA--LSTPNLLS 470

Query: 493 LYLGDNDFEFLPPEI-GNLKNLQILSMRENDLIEVP 597
           L L  N    +  E+ GN+ +L+ L++  NDL  VP
Sbjct: 471 LSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAVP 506



 Score = 27.5 bits (58), Expect = 0.15
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = +1

Query: 328 SLPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLP--GNFFIMDSLRALYL 501
           +L  L + NVSL+++  L     S P L  L L +N+L    L   GN   + SLR L L
Sbjct: 446 TLLHLNLDNVSLSQVPAL-----STPNLLSLSLAFNSLPTVALEVAGN---ISSLRYLNL 497

Query: 502 GDNDFEFLPPEIGNLKNLQILSMRENDL 585
             ND   +P    +L  L+ LS+  N +
Sbjct: 498 DYNDLSAVPIVTHSLTELRHLSLEGNPI 525



 Score = 25.8 bits (54), Expect = 0.46
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 331 LPKLRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 447
           L  LRI++ S N+L +LP        LE LD+++N L +
Sbjct: 319 LGNLRIVDFSHNRLRSLPDNLFRETGLERLDVSHNLLGK 357


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 348 PQCFIKQTV*LAEGFWFLPC 407
           P C+I   + L  GFWF+ C
Sbjct: 217 PYCYINCLIYLIGGFWFMQC 236


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/43 (23%), Positives = 24/43 (55%)
 Frame = -2

Query: 293 LAKFRISKLLKLASAAGTTEILLWLRDRRVMFSRENKPGISSR 165
           L +  I+  L+L+      ++ +W ++RRV + +E+ P  + +
Sbjct: 145 LRRIEIATCLRLSEK----QVKIWFQNRRVKYKKEDLPAAAGK 183


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = -2

Query: 266 LKLASAAGTTE--ILLWLRDRRVMFSRENK 183
           +++A A   TE  I +W ++RR+ + +ENK
Sbjct: 273 IEIAHALCLTERQIKIWFQNRRMKWKKENK 302


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = -2

Query: 266 LKLASAAGTTE--ILLWLRDRRVMFSRENK 183
           +++A A   TE  I +W ++RR+ + +ENK
Sbjct: 275 IEIAHALCLTERQIKIWFQNRRMKWKKENK 304


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -2

Query: 278 ISKLLKLASAAGTTE--ILLWLRDRRVMFSRENKPGISSRLDI 156
           I +  +LA   G +E  I +W ++RR    ++NK  I  +  I
Sbjct: 184 IKRKSELAENLGLSERQIKIWFQNRRAKERKQNKKRIEEKSQI 226


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +2

Query: 686 PRQQQVSAEAGR*LLGSAHRXPAQAGGVP 772
           P  Q V A  G    GSA    A AGG+P
Sbjct: 245 PGAQTVGASFGLHATGSAPSPTAGAGGLP 273


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -2

Query: 236 EILLWLRDRRVMFSRENK 183
           +I +W ++RR+ + ++NK
Sbjct: 276 QIKIWFQNRRMKWKKDNK 293


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -2

Query: 236 EILLWLRDRRVMFSRENK 183
           +I +W ++RR+ + ++NK
Sbjct: 276 QIKIWFQNRRMKWKKDNK 293


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -2

Query: 194 RENKPGISSRLDIPLSTKSISGLFISLASSITFLAFDILPVFG 66
           R +  GI  R  I     ++  +F+ +     ++ FD+L V+G
Sbjct: 270 RASSRGIIPRAKIKTVKMTLVIVFVFVLCWSPYIVFDLLQVYG 312


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 669  EIGTLDLASNKSVLRLEGN 725
            +IGTLD+A  K   +L  N
Sbjct: 1430 QIGTLDVAFKKRFAKLNAN 1448


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 669  EIGTLDLASNKSVLRLEGN 725
            +IGTLD+A  K   +L  N
Sbjct: 1430 QIGTLDVAFKKRFAKLNAN 1448


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 669  EIGTLDLASNKSVLRLEGN 725
            +IGTLD+A  K   +L  N
Sbjct: 1430 QIGTLDVAFKKRFAKLNAN 1448


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 669  EIGTLDLASNKSVLRLEGN 725
            +IGTLD+A  K   +L  N
Sbjct: 1430 QIGTLDVAFKKRFAKLNAN 1448


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,729
Number of Sequences: 336
Number of extensions: 3698
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)