Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P18
         (948 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    27   0.25 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.76 
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              23   3.1  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   7.1  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   9.3  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    22   9.3  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    22   9.3  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    22   9.3  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    22   9.3  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    22   9.3  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   9.3  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    22   9.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   9.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   9.3  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   9.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   9.3  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   9.3  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   9.3  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   9.3  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   9.3  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   9.3  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   9.3  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    22   9.3  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   9.3  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 27.1 bits (57), Expect = 0.25
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = +3

Query: 696 GPGXNLXEPFQHVRRSYDDLRRQTEDSTSXXAGSYRLDPNAGPPVI 833
           GPG          RRS  +    T  STS  A S   D +AG P +
Sbjct: 157 GPGAAAAAALLSKRRSVSECSLGTASSTSSTASSRNSDRSAGSPSV 202


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.76
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 324 LPLGTVLGLGTFAAIQKGHLKPNP 395
           +P G  + +GTF   ++ H+ PNP
Sbjct: 434 IPAGCTVVIGTFKLHRQPHIYPNP 457


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 809 PERGASGHKNXTLPFPPAGTKNXGPM 886
           P  GA G    T+ + P GTKN G +
Sbjct: 76  PICGACGDIAHTVKYCPKGTKNPGTL 101


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 10/45 (22%), Positives = 21/45 (46%)
 Frame = +1

Query: 604 IYILMLVQVAHSTWTPTDLSSARILTDLIMKVQXPTWXNHSSTSV 738
           + + ++ + +H TW  ++  S   +     ++  P    HS TSV
Sbjct: 84  VMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSV 128


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 597 TNDIYSDAGPGSSLDLDTNRPVFSEDTYR 683
           TN +    GP S LD+D +   +   ++R
Sbjct: 66  TNILIRSMGPVSELDMDYSMDCYFRQSWR 94


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 144 PNPRFGP 150


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 140 FNLVIKYLNYE*F 178
           FN VIKY+N++ F
Sbjct: 3   FNNVIKYINFDRF 15


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 507 SCRAMPSASQHMPAGMTTSPRSSQP 433
           S  A+ S S   P G ++SP  S P
Sbjct: 72  SAAAITSTSPSYPGGGSSSPSPSSP 96


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 639 DLDTNRPVFSEDTYR 683
           DLD N P F++  YR
Sbjct: 194 DLDMNHPGFADKEYR 208


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 393 PNPRFGP 399


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 392 PNPRFGP 398


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 377 PNPRFGP 383


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 387 PNPRFGP 407
           PNPRFGP
Sbjct: 393 PNPRFGP 399


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,021
Number of Sequences: 438
Number of extensions: 5810
Number of successful extensions: 26
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31081323
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)