Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P14
         (934 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    37   0.84 
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    35   2.6  
UniRef50_Q9NZ81 Cluster: Proline-rich protein 13; n=17; Euteleos...    34   5.9  

>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 36.7 bits (81), Expect = 0.84
 Identities = 21/41 (51%), Positives = 22/41 (53%)
 Frame = +2

Query: 479 SSVSXPNDXLPXVXRXRXPVSXXSKXXIRXSXKSGDTPGKN 601
           SS S   D L  V R R  VS  SK  IR S +SGD  GKN
Sbjct: 18  SSASSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKN 58


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 35.1 bits (77), Expect = 2.6
 Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +2

Query: 662 FPXGXPPLTTIPKIHPQFKGGXPXXXLK-IPGXPLKXPXPP--FPP 790
           FP   PPLTTI KI+PQFK        K     PL+ P     FPP
Sbjct: 69  FPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114


>UniRef50_Q9NZ81 Cluster: Proline-rich protein 13; n=17;
           Euteleostomi|Rep: Proline-rich protein 13 - Homo sapiens
           (Human)
          Length = 148

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = +2

Query: 647 PXCXXFPXGX-PPLTTIPKIHPQFKGGXPXXXLKIPGXPLKXPXPPFPPXTTP 802
           P    FP G  PP    P  +P F  G P   +  PG P   P  P+PP   P
Sbjct: 31  PINPPFPPGPCPPPPGAPHGNPAFPPGGPPHPVPQPGYPGCQPLGPYPPPYPP 83


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 356,956,120
Number of Sequences: 1657284
Number of extensions: 4130819
Number of successful extensions: 8291
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7839
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 85324527343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)