Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P14
         (934 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    31   1.3  
09_02_0414 - 8825575-8826654,8826737-8827144                           29   4.0  
11_06_0610 - 25449085-25453284                                         29   5.3  
07_01_0479 + 3606663-3607448                                           29   5.3  

>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 17/46 (36%), Positives = 18/46 (39%)
 Frame = +2

Query: 665  PXGXPPLTTIPKIHPQFKGGXPXXXLKIPGXPLKXPXPPFPPXTTP 802
            P G PPL       P    G P      P  P + P PP PP  TP
Sbjct: 1126 PDGPPPLPLDAPPPPPLPEGPPPLPSDSP--PCQPPLPPSPPPATP 1169


>09_02_0414 - 8825575-8826654,8826737-8827144
          Length = 495

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 18/58 (31%), Positives = 21/58 (36%)
 Frame = +2

Query: 614 GPQKAXTXKKGPXCXXFPXGXPPLTTIPKIHPQFKGGXPXXXLKIPGXPLKXPXPPFP 787
           GP    +      C   P   P  T+    HPQF    P   L  P   +  P PPFP
Sbjct: 2   GPHPPSSYSDKKTCQNVPPEKPSSTSF--CHPQF----PQHLLSHPAYAMNFPFPPFP 53


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 677  PPLTTIPKIHPQFKGGXPXXXLKIPGXPLKXPXPPFPPXTTP 802
            PP   +    P  K   P   + +P  P+K P PP P  + P
Sbjct: 1137 PPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPP 1178



 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 677  PPLTTIPKIHPQFKGGXPXXXLKIPGXPLKXPXPPFPPXTTP 802
            PP   +    P  K   P   + +P  P+K P PP P  + P
Sbjct: 1169 PPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPP 1210



 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 677  PPLTTIPKIHPQFKGGXPXXXLKIPGXPLKXPXPPFPPXTTP 802
            PP   +    P  K   P   + +P  P+K P PP P  + P
Sbjct: 1201 PPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPP 1242


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = +2

Query: 647 PXCXXFPXGXPPLTTIPKIHPQFKGGXPXXXLKIPGXPLKXPXPPFPPXTTP 802
           P    F  G PP+   P++ P   GG P      PG     P PPF P   P
Sbjct: 203 PPPGPFMRGPPPMGP-PQVRPGMPGGPP------PGMRPGMPPPPFRPGMPP 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,263,051
Number of Sequences: 37544
Number of extensions: 129966
Number of successful extensions: 332
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)