Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P12
         (926 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0523 - 18518158-18518442,18518786-18518899,18518994-185192...   116   2e-26
04_04_1332 + 32718584-32718706,32718892-32718960,32719069-327191...   116   2e-26
06_01_0503 - 3596664-3596837,3597647-3598069,3598362-3598595,359...    31   1.7  
03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,855...    30   2.3  
11_01_0669 - 5454116-5454153,5454569-5454770,5454865-5455029,545...    29   6.9  
01_07_0131 + 41292800-41293400,41293522-41293649,41293759-412940...    29   6.9  

>10_08_0523 -
           18518158-18518442,18518786-18518899,18518994-18519219,
           18519364-18519470,18519809-18519964,18520100-18520210
          Length = 332

 Score =  116 bits (280), Expect = 2e-26
 Identities = 52/119 (43%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
 Frame = +1

Query: 238 LSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKFKTNLEHEYIQN 417
           + R+++LAW+N  LQ   +K+EE  +GA  CQ MD   PG+VPM ++ F    E+E IQN
Sbjct: 15  VGRNEILAWINTTLQLGLSKVEEAASGAVACQLMDAAHPGAVPMHKVNFDAKTEYEMIQN 74

Query: 418 FKILQAGFKKMGVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDANYGG--AAYDAVAQRE 588
           +K+LQ  F K+ + K + ++KL KGR  DN EF+QW K++ D+  GG   +Y+A  +RE
Sbjct: 75  YKVLQDVFNKLKITKHIEVNKLTKGRPLDNLEFMQWMKRYCDSVNGGFMNSYNASERRE 133


>04_04_1332 +
           32718584-32718706,32718892-32718960,32719069-32719155,
           32719865-32719971,32720066-32720187,32720462-32720535,
           32720833-32720946,32721100-32721213
          Length = 269

 Score =  116 bits (280), Expect = 2e-26
 Identities = 51/107 (47%), Positives = 73/107 (68%)
 Frame = +1

Query: 238 LSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKFKTNLEHEYIQN 417
           + R ++L+W+N  LQ + AK+EE  +GA  CQ MDM+ PG VPM ++ F    E++ IQN
Sbjct: 19  VGRGEILSWINATLQLSLAKVEEAASGAVQCQLMDMVHPGVVPMHKVNFDAKTEYDMIQN 78

Query: 418 FKILQAGFKKMGVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDANYGG 558
           +KILQ  F K+ + K + ++KLVKGR  DN EFLQW K++ D+  GG
Sbjct: 79  YKILQDVFNKLRLSKNIEVNKLVKGRPLDNLEFLQWLKRYCDSVNGG 125


>06_01_0503 -
           3596664-3596837,3597647-3598069,3598362-3598595,
           3598720-3598993,3599390-3599523,3599572-3599634,
           3599759-3599846,3599919-3599989,3600898-3601010,
           3601836-3602004,3602580-3602671,3602819-3603295,
           3603736-3604090
          Length = 888

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 355 QGTACP*TGNRRHLYTTLRSSQSLTGDNHSPTLAYHAAIDF 233
           QGT+C      RH  T LR++   TG +   +L  H A+D+
Sbjct: 733 QGTSCRGVNWDRHSLTDLRAAVVCTGGHRLASLLRHLALDY 773


>03_02_0445 -
           8551912-8552047,8552729-8552896,8553785-8554068,
           8554143-8555386,8556901-8556967,8557059-8557150,
           8557269-8557480,8558541-8558623,8559092-8559122,
           8559770-8559951,8560557-8560616,8561092-8561289,
           8561485-8561539,8562740-8562855,8563012-8563176,
           8563310-8563483,8564134-8564333,8564778-8564882,
           8565063-8565126,8566452-8566718
          Length = 1300

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -1

Query: 614 EPPCPMGRPSRCATASYAAP-P*LASKNFLNHCKNSKLSWKRP 489
           +P  P   PS   + + A P P  A  N L  C  SKLSW  P
Sbjct: 6   DPEAPTPTPSPSPSPAKATPSPASADGNRLRRCVQSKLSWGPP 48


>11_01_0669 -
           5454116-5454153,5454569-5454770,5454865-5455029,
           5455278-5456183
          Length = 436

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +1

Query: 283 SNFAKIEEL-CTGAAY---CQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQAGF 441
           SN  KI E+ C G      C+F+  L    +P+++I  K   EH   + F  +  GF
Sbjct: 377 SNHLKIVEIKCKGKEVMWVCKFLKTLGTFGIPLEKINIKLTSEHCRSECFNFVCTGF 433


>01_07_0131 +
           41292800-41293400,41293522-41293649,41293759-41294019,
           41294154-41294416,41294507-41294831
          Length = 525

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 648 GFLSGSGPRXGRAPVPHGQTFSLRHCVICRTSIVGVKEFLEP 523
           GFLS +    G   V H    + +    C  + VG+K++L P
Sbjct: 437 GFLSSAPSSSGHGSVEHAMNLNNKIVDFCEKNGVGMKQYLAP 478


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,987,540
Number of Sequences: 37544
Number of extensions: 461283
Number of successful extensions: 1111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)