Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_P10
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.008
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.008
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.008
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.023
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.023
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.22
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.22
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.29
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 32 0.50
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 32 0.50
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 32 0.66
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 0.88
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.2
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 30 2.7
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 30 2.7
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 30 2.7
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 30 2.7
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.7
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 3.5
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 6.2
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 6.2
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 6.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 6.2
AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like ... 29 6.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.2
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 28 8.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 28 8.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 717 GGXXPXXXXXGGGXXPPPPXKXXFXXGXPPPPPP 818
GG P GG PPPP G PPPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 33.1 bits (72), Expect = 0.29
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 753 GXXPPPPXKXXFXXGXPPPPPP 818
G PPPP G PPPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPP 732
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPPPP 818
GG PPPP G PPPPPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPP 747
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPPPP 818
GG PPPP G PPPPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 755 GXPPXPXKKXFFXGXXPPPPPP 820
G PP P G PPPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPP 732
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 717 GGXXPXXXXXGGGXXPPPPXKXXFXXGXPPPPPP 818
GG P GG PPPP G PPPPPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 33.1 bits (72), Expect = 0.29
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 753 GXXPPPPXKXXFXXGXPPPPPP 818
G PPPP G PPPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPP 732
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPPPP 818
GG PPPP G PPPPPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPP 747
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPPPP 818
GG PPPP G PPPPPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 755 GXPPXPXKKXFFXGXXPPPPPP 820
G PP P G PPPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPP 732
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = +3
Query: 717 GGXXPXXXXXGGGXXPPPPXKXXFXXGXPPPPPP 818
GG P GG PPPP G PPPPPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 33.1 bits (72), Expect = 0.29
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 753 GXXPPPPXKXXFXXGXPPPPPP 818
G PPPP G PPPPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPP 315
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPPPP 818
GG PPPP G PPPPPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPP 330
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPPPP 818
GG PPPP G PPPPPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPP 346
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 755 GXPPXPXKKXFFXGXXPPPPPP 820
G PP P G PPPPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPP 315
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.023
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 750 GGXXPPPPXKXXFXXGXPPPPPP 818
GG PPPP + G PPPPPP
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPPPP 353
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 746 GGGGXPPXPXKKXFFXGXXPPPPPP 820
G GG PP P + G PPPPPP
Sbjct: 329 GMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 729 PXXXXXGGGXXPPPPXKXXFXXGXPPPPPP 818
P GG PPPP G PPPPP
Sbjct: 339 PGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +3
Query: 720 GXXPXXXXXGGGXXPPPPXKXX--FXXGXPPPPPP 818
G P G PPPP + G PPPPPP
Sbjct: 305 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.023
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 750 GGXXPPPPXKXXFXXGXPPPPPP 818
GG PPPP + G PPPPPP
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPPPP 363
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 746 GGGGXPPXPXKKXFFXGXXPPPPPP 820
G GG PP P + G PPPPPP
Sbjct: 339 GMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 729 PXXXXXGGGXXPPPPXKXXFXXGXPPPPPP 818
P GG PPPP G PPPPP
Sbjct: 349 PGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +3
Query: 720 GXXPXXXXXGGGXXPPPPXKXX--FXXGXPPPPPP 818
G P G PPPP + G PPPPPP
Sbjct: 315 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 750 GGXXPPPPXKXXFXXGXPPPPPP 818
G PPPP G PPPPPP
Sbjct: 534 GAPTPPPPPPVGMANGGPPPPPP 556
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPPP 815
G PPPP G PPPPP
Sbjct: 534 GAPTPPPPPPVGMANGGPPPPPP 556
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 753 GXXPPPPXKXXFXXGXPPPPPP 818
G PPPP G PPPPPP
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPP 595
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 729 PXXXXXGGGXXPPPPXKXXFXXGXPPPPPP 818
P G PPPP PPPPPP
Sbjct: 567 PLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP G PPPPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPP 581
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPP 582
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 727 PPXXXXGGGGXXPXPQXKXXFXGXXPPPPPP 819
PP G P P G PPPPPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 727 PPXXXXGGGGXXPXPQXKXXFXGXXPPPPPP 819
PP G P P G PPPPPP
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Frame = +3
Query: 717 GGXXPXXXXXGGGXXPPPPXKXXF-----XXGXPPPPPP 818
GG P GG PPPP G PPPPPP
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPP 812
GGG PPPP + G PPPP
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPP 696
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPPPP 818
GG PPPP + G PPP P
Sbjct: 676 GGQGPPPPPQGQQYYGGPPPPGQP 699
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPP 812
GGG PPPP + G PPPP
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPP 696
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPPPP 818
GG PPPP + G PPP P
Sbjct: 676 GGQGPPPPPQGQQYYGGPPPPGQP 699
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 31.9 bits (69), Expect = 0.66
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 747 GGGXXPPPPXKXXFXXGXPPPPP 815
GGG PPPP PPPPP
Sbjct: 44 GGGFGPPPPPFGPVGYALPPPPP 66
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP G PPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPP 813
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.5 bits (68), Expect = 0.88
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP G PPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPP 813
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 796 PPPPLPPISSGAPPPPPPP 814
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP K PPPPPP
Sbjct: 125 PPPPRKSRAGGSSPPPPPP 143
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 761 PPXPXKKXFFXGXXPPPPPP 820
PP P +K G PPPPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPPP 143
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP G PPPPPP
Sbjct: 234 PPPPPLPPVGAGAPPPPPP 252
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 753 GXXPPPPXKXXFXXGXPPPPPP 818
G PPPP PPPPPP
Sbjct: 232 GAPPPPPLPPVGAGAPPPPPPP 253
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 755 GXPPXPXKKXFFXGXXPPPPPP 820
G PP P G PPPPPP
Sbjct: 232 GAPPPPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP G PPPPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPP 238
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 753 GXXPPPPXKXXFXXGXPPPPPP 818
G PPPP PPPPPP
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPPP 239
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 755 GXPPXPXKKXFFXGXXPPPPPP 820
G PP P G PPPPPP
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP G PPPPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPP 238
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 753 GXXPPPPXKXXFXXGXPPPPPP 818
G PPPP PPPPPP
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPPP 239
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 755 GXPPXPXKKXFFXGXXPPPPPP 820
G PP P G PPPPPP
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPPP 239
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPP 33
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPP 33
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPP 33
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPP 33
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 714 GGGXXPXXXXXGGGXXPPPPXKXXFXXGXPPPPPP 818
GGG PPPP PPPPPP
Sbjct: 25 GGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -1
Query: 817 GGGGGGXPXKKXFFXGGGGXXPPPXXXXXGXXPPP 713
GGGGGG + + GG G PP P P
Sbjct: 16 GGGGGGGGGGEAGYSGGAGVEAPPPPPPADAAPAP 50
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 817 GGGGGGXPXKKXFFXGGGG 761
GGGGGG P + + GGG
Sbjct: 257 GGGGGGIPGQSMYMGAGGG 275
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 817 GGGGGGXPXKKXFFXGGGGXXPPPXXXXXGXXPPP 713
GGGGGG GGGG P PPP
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 817 GGGGGGXPXKKXFFXGGGGXXPPPXXXXXGXXPPP 713
GGGGGG GGGG P PPP
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 817 GGGGGGXPXKKXFFXGGGG 761
GGGGGG P + + GGG
Sbjct: 338 GGGGGGIPGQSVYMGAGGG 356
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 817 GGGGGGXPXKKXFFXGGGG 761
GGGGGG P + + GGG
Sbjct: 372 GGGGGGIPGQSMYMGAGGG 390
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 817 GGGGGGXPXKKXFFXGGGG 761
GGGGGG P + + GGG
Sbjct: 232 GGGGGGIPGQSVYMGAGGG 250
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 72 PPPPLISILQQAPPPPPPP 90
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 71 PPPPPLISILQQAPPPPPP 89
>AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like
(grd related) protein31 protein.
Length = 156
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 818 GGGGGGXXPXKXXFXWGXGXXPPPPXXXXGG 726
G GGGG G G PPPP GG
Sbjct: 27 GAGGGGCGGCGGGCGGGCGCAPPPPPCCGGG 57
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 1344 PPPPPSDDLTPVPPPPPPP 1362
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 750 GGXXPPPPXKXXFXXGXPPPPP 815
GG PPP K G PPP P
Sbjct: 24 GGKKKPPPPKSASKMGPPPPAP 45
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 160 PPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 762 PPPPXKXXFXXGXPPPPPP 818
PPPP PPPPPP
Sbjct: 160 PPPPVSVPSSKPTPPPPPP 178
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 750 GGXXPPPPXKXXFXXGXPPPPP 815
GG PPP K G PPP P
Sbjct: 24 GGKKKPPPPKSASKMGPPPPAP 45
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 818 GGGGGGXXPXKXXFXWGXGXXPPPPXXXXGG 726
GGGG G G G PPPP GG
Sbjct: 191 GGGGMGGGGGSGGSGGGSGRFPPPPPPYGGG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,988,072
Number of Sequences: 27780
Number of extensions: 213398
Number of successful extensions: 3570
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1990
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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