Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P08
         (898 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8VAI0 Cluster: Wsv434; n=1; Shrimp white spot syndrome...    39   0.15 
UniRef50_Q7R3A9 Cluster: GLP_111_35594_43726; n=1; Giardia lambl...    33   7.5  
UniRef50_Q8VAY0 Cluster: Wsv239; n=1; Shrimp white spot syndrome...    33   9.9  

>UniRef50_Q8VAI0 Cluster: Wsv434; n=1; Shrimp white spot syndrome
           virus|Rep: Wsv434 - White spot syndrome virus (WSSV)
          Length = 142

 Score = 39.1 bits (87), Expect = 0.15
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = +1

Query: 193 SFLTTNIKGNLPFLSTINHINILT*ALRNCNESRWGHYQFTRFAWFTLGFXINSGXKLGE 372
           SF TT++  NL F   + HI+  T  + +C E+ W      RF+W    F  N    L  
Sbjct: 40  SFFTTSLLTNLFFSLPLTHISAPTHLVLSCLENNWTAICSIRFSWSLKNF--NDSFSLYT 97

Query: 373 PEHLTFL 393
            EHL F+
Sbjct: 98  KEHLFFI 104


>UniRef50_Q7R3A9 Cluster: GLP_111_35594_43726; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_111_35594_43726 - Giardia lamblia
            ATCC 50803
          Length = 2710

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = -1

Query: 235  LRTEDCLLYL*LENLFGTTHWQKLYDIIYTNKKWFYEFRLHTSLEKQLFFKFNLTL--AL 62
            LRT  C+L   + +    + + K YD I  NKK+  +F  +TS +    F  NL +    
Sbjct: 2268 LRTLSCILTGIINDKV-ISDFSKPYDFIAANKKYTIDFDAYTSYDMVRSFAQNLPILDGT 2326

Query: 61   ELFSKS*RNSLVV 23
            E+F+ S  NSLVV
Sbjct: 2327 EVFNMS-ENSLVV 2338


>UniRef50_Q8VAY0 Cluster: Wsv239; n=1; Shrimp white spot syndrome
           virus|Rep: Wsv239 - White spot syndrome virus (WSSV)
          Length = 127

 Score = 33.1 bits (72), Expect = 9.9
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +1

Query: 763 PPXXPPPXXLKXXXPXFFXPGXFXFLKRGPPXXGXPXPPXPXXI 894
           PP  PPP       P F  P  F F+   PP    P PP P  +
Sbjct: 39  PPFVPPPPPSPPPPPPFVVPEPFPFV---PPPPPSPPPPPPFVV 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,731,388
Number of Sequences: 1657284
Number of extensions: 11754234
Number of successful extensions: 18495
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18426
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)