Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P06
         (929 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    30   0.087
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    25   2.5  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    25   2.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   5.7  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 30.3 bits (65), Expect = 0.087
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
 Frame = +1

Query: 547  FYHTGIFPRDSRNVAVCQAYIHGSCSNKDCKYKHPSD------LISNEACNEVVTIHNIT 708
            FY   I       VAVC      +  NK  KY    +      L  ++   E+V  + I 
Sbjct: 960  FYKHSIAENSQYGVAVCTVVAEDADQNKTVKYSLEGEKGVLELLHVDDETGEIVVRNRID 1019

Query: 709  QPQFR-IPLSTTLRDNDSPPGAKFDESHXKIWD*NQS 816
              ++  +  S    D  +PP A F E   ++ D N +
Sbjct: 1020 HEEYSWLNFSVRAADTGTPPRASFVEVFVQVLDENDN 1056


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +1

Query: 568 PRDSRNVAVCQAYIHGSCSNKDCKYKHPSDLISNEACNEVVTIHN 702
           P D+   A C+    GS S+KDC  K  S     +  N    + N
Sbjct: 67  PYDASIQAACKQIYEGSYSSKDCGTKGTSGNNGTDTSNGYKDVWN 111


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +1

Query: 568 PRDSRNVAVCQAYIHGSCSNKDCKYKHPSDLISNEACNEVVTIHN 702
           P D+   A C+    GS S+KDC  K  S     +  N    + N
Sbjct: 67  PYDASIQAACKQIYEGSYSSKDCGTKGTSGNNGTDTSNGYKDVWN 111


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 12/56 (21%), Positives = 21/56 (37%)
 Frame = +1

Query: 478 YQNKGCYRTNCKFLHSTVEDEENFYHTGIFPRDSRNVAVCQAYIHGSCSNKDCKYK 645
           Y      RT+CKF H     +   +   + P  +   A   A I  + +  +  +K
Sbjct: 533 YTRSDNLRTHCKFKHPMFNPDTRKFENMLSPTMASQAAAAAAAISAAAAAANSSFK 588


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 811,789
Number of Sequences: 2352
Number of extensions: 16563
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101295495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)