Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P05
         (966 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    34   0.89 
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    34   0.89 
AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens ...    31   8.3  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 33.9 bits (74), Expect = 0.89
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -3

Query: 697 ERRTGIR*AAGSEQESARGSFQGETPGIFXVLSGFATSDLSVDFCDAXQGGGAYGKTPAT 518
           ER  G+    GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P +
Sbjct: 573 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 630

Query: 517 RPFYGSWP 494
            P Y S P
Sbjct: 631 TPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 33.9 bits (74), Expect = 0.89
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -3

Query: 697 ERRTGIR*AAGSEQESARGSFQGETPGIFXVLSGFATSDLSVDFCDAXQGGGAYGKTPAT 518
           ER  G+    GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631

Query: 517 RPFYGSWP 494
            P Y S P
Sbjct: 632 TPSYLSVP 639


>AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43705 fis, clone TESOP2001818. ).
          Length = 321

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -3

Query: 823 RISAAVGLNGGSCTQPSWSE-RPTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESA 647
           R + + G + G  + P   E RP P  D+   S E++PR P G  R      AG  +  A
Sbjct: 246 RAALSCGPSWGEDSGPRHRELRPDP--DSRRASAERSPRCPPGSPR-----KAGPGRRDA 298

Query: 646 RGSFQGETPGIFXVLSGFA 590
           RG+  G   G F VL+G A
Sbjct: 299 RGAALG---GAFRVLAGRA 314


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,612,909
Number of Sequences: 237096
Number of extensions: 2622832
Number of successful extensions: 10779
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10779
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12825217482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)