Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_P05
         (966 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    30   2.8  
Z75714-4|CAB00062.1|  360|Caenorhabditis elegans Hypothetical pr...    29   6.5  
Z81146-4|CAB03525.1|  501|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 620 RRFPLEAPSCALLFRXCRLPDTCPPFSLREAWRFLIA 730
           R+F +E    ALL +   +P+TC   +  E W FL A
Sbjct: 75  RQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCA 111


>Z75714-4|CAB00062.1|  360|Caenorhabditis elegans Hypothetical
           protein ZC434.8 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 815 RSGRAERGFVHTAXLERTTYTELRYLQREL*ESATLPEGRKADRYPVSG 669
           R GR+ +G+     L  T Y  +    +E+  S T PE  K   YP++G
Sbjct: 129 RCGRSLQGYPFNPCLSETNYKMMETRMKEIFNSITDPE-LKGTYYPLTG 176


>Z81146-4|CAB03525.1|  501|Caenorhabditis elegans Hypothetical
           protein K10D11.6 protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = -3

Query: 826 YRISAAVGLNGGSCT---QPSWSERPTPN*DTYSVS 728
           + IS  VG NG +     Q  WS+ PTPN   Y+V+
Sbjct: 117 FSISLLVGTNGNNTRFAFQVQWSDFPTPNPAFYTVT 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,979,239
Number of Sequences: 27780
Number of extensions: 379687
Number of successful extensions: 855
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)