Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_P03
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 141 7e-34
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 141 7e-34
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 141 7e-34
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 141 7e-34
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 141 7e-34
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 141 7e-34
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 140 1e-33
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 138 3e-33
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 128 4e-30
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 111 8e-25
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 111 8e-25
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 109 2e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 109 2e-24
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 102 3e-22
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 60 2e-09
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 50 2e-06
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 37 0.021
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 36 0.048
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 35 0.064
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 30 2.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 30 2.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 30 2.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 30 2.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 141 bits (341), Expect = 7e-34
Identities = 98/223 (43%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK-VS*TSIXHRTXIVLTGIXWKKFGL*P-XK*TXXXPQXXPVWSLRVPLTPRP-XXKN 529
+K+ + IV +K P+ PV PL P+ K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 530 YPXFFXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFG 709
F P + V V G P L
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL- 179
Query: 710 XXPGRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVAL 835
GR L YLM ILTERGYSFTTT EREIV E LCYVAL
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T V P L+TE LNPKA +K+ F TP + + +
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 141 bits (341), Expect = 7e-34
Identities = 98/223 (43%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK-VS*TSIXHRTXIVLTGIXWKKFGL*P-XK*TXXXPQXXPVWSLRVPLTPRP-XXKN 529
+K+ + IV +K P+ PV PL P+ K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 530 YPXFFXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFG 709
F P + V V G P L
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL- 179
Query: 710 XXPGRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVAL 835
GR L YLM ILTERGYSFTTT EREIV E LCYVAL
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T V P L+TE LNPKA +K+ F TP + + +
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 141 bits (341), Expect = 7e-34
Identities = 98/223 (43%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK-VS*TSIXHRTXIVLTGIXWKKFGL*P-XK*TXXXPQXXPVWSLRVPLTPRP-XXKN 529
+K+ + IV +K P+ PV PL P+ K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 530 YPXFFXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFG 709
F P + V V G P L
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL- 179
Query: 710 XXPGRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVAL 835
GR L YLM ILTERGYSFTTT EREIV E LCYVAL
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T V P L+TE LNPKA +K+ F TP + + +
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 141 bits (341), Expect = 7e-34
Identities = 98/223 (43%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK-VS*TSIXHRTXIVLTGIXWKKFGL*P-XK*TXXXPQXXPVWSLRVPLTPRP-XXKN 529
+K+ + IV +K P+ PV PL P+ K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 530 YPXFFXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFG 709
F P + V V G P L
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL- 179
Query: 710 XXPGRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVAL 835
GR L YLM ILTERGYSFTTT EREIV E LCYVAL
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T V P L+TE LNPKA +K+ F TP + + +
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 141 bits (341), Expect = 7e-34
Identities = 98/223 (43%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK-VS*TSIXHRTXIVLTGIXWKKFGL*P-XK*TXXXPQXXPVWSLRVPLTPRP-XXKN 529
+K+ + IV +K P+ PV PL P+ K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 530 YPXFFXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFG 709
F P + V V G P L
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL- 179
Query: 710 XXPGRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVAL 835
GR L YLM ILTERGYSFTTT EREIV E LCYVAL
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T V P L+TE LNPKA +K+ F TP + + +
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 141 bits (341), Expect = 7e-34
Identities = 98/223 (43%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK-VS*TSIXHRTXIVLTGIXWKKFGL*P-XK*TXXXPQXXPVWSLRVPLTPRP-XXKN 529
+K+ + IV +K P+ PV PL P+ K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 530 YPXFFXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFG 709
F P + V V G P L
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL- 179
Query: 710 XXPGRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVAL 835
GR L YLM ILTERGYSFTTT EREIV E LCYVAL
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T V P L+TE LNPKA +K+ F TP + + +
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 173
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 140 bits (339), Expect = 1e-33
Identities = 97/223 (43%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD++VAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK-VS*TSIXHRTXIVLTGIXWKKFGL*P-XK*TXXXPQXXPVWSLRVPLTPRP-XXKN 529
+K+ + IV +K P+ PV PL P+ K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 530 YPXFFXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFG 709
F P + V V G P L
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL- 179
Query: 710 XXPGRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVAL 835
GR L YLM ILTERGYSFTTT EREIV E LCYVAL
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T V P L+TE LNPKA +K+ F TP + + +
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALP 173
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 138 bits (335), Expect = 3e-33
Identities = 95/223 (42%), Positives = 108/223 (48%), Gaps = 4/223 (1%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD++VAAL++DNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK-VS*TSIXHRTXIVLTGIXWKKFGL*P-XK*TXXXPQXXPVWSLRVPLTPRP-XXKN 529
+K+ + IV +K P+ PV PL P+ K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 530 YPXFFXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFG 709
F P + V V G P L
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL- 179
Query: 710 XXPGRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVAL 835
GR L YLM ILTERGYSFTTT EREIV E LCYVAL
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T V P L+TE LNPKA +K+ F TP + + +
Sbjct: 79 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALP 173
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 128 bits (310), Expect = 4e-30
Identities = 91/220 (41%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Frame = +2
Query: 185 DEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQNK 364
+EE+AALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ+K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 365 K-VS*TSIXHRTXIVLTGIXWKKFGL*P-XK*TXXXPQXXPVWSLRVPLTPRP-XXKNYP 535
+ + IV +K P+ PV PL P+ K
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 536 XFFXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFGXX 715
F P + V V G P +
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYAL-PHAIQRLDL 180
Query: 716 PGRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVA 832
GR L Y+M ILTERGY+FTTT EREIV E LCYVA
Sbjct: 181 AGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVA 220
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T + P L+TE LNPK+ +K+ F TP + + +
Sbjct: 78 NWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQ 137
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 138 AVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALP 172
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 111 bits (266), Expect = 8e-25
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK 367
+K+
Sbjct: 61 SKR 63
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 111 bits (266), Expect = 8e-25
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD+EVAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK 367
+K+
Sbjct: 61 SKR 63
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 109 bits (263), Expect = 2e-24
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD++VAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK 367
+K+
Sbjct: 61 SKR 63
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 109 bits (263), Expect = 2e-24
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ 358
MCD++VAALVVDNGSGMCKAGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 359 NKK 367
+K+
Sbjct: 61 SKR 63
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 102 bits (245), Expect = 3e-22
Identities = 80/205 (39%), Positives = 90/205 (43%), Gaps = 4/205 (1%)
Frame = +2
Query: 233 KAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQNKK-VS*TSIXHRTXIVL 409
+AGFAGDDAPRA PSIVG RHQGV V +G KDSYVG+EAQ+K+ + IV
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 410 TGIXWKKFGL*P-XK*TXXXPQXXPVWSLRVPLTPRP-XXKNYPXFFXNXXXPPXFXPSN 583
+K P+ PV PL P+ K F P +
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 584 RVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFGXXPGRXLXKYLMXILTER 763
V V G P L GR L YLM ILTER
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL-DLAGRDLTDYLMKILTER 183
Query: 764 GYSFTTTXEREIVVTSGE-LCYVAL 835
GYSFTTT EREIV E LCYVAL
Sbjct: 184 GYSFTTTAEREIVRDIKEKLCYVAL 208
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T V P L+TE LNPKA +K+ F TP + + +
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 159
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 60.1 bits (139), Expect = 2e-09
Identities = 62/180 (34%), Positives = 70/180 (38%), Gaps = 6/180 (3%)
Frame = +2
Query: 314 VXIGXKDSYVGNEAQNKKVS*T---SIXHRTXIVLTGIXWKKFGL*PX-K*TXXXPQXXP 481
V +G KDSYVG+EAQ+K+ T I H IV +K P+ P
Sbjct: 2 VGMGQKDSYVGDEAQSKRGILTLKYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPEEHP 59
Query: 482 VWSLRVPLTPRPXX-KNYPXFFXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXX 658
V PL P+ K F P + V V
Sbjct: 60 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 119
Query: 659 XXXXXGXXXPPXHLGFGXXPGRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVAL 835
G P L GR L YLM ILTERGYSFTTT EREIV E LCYVAL
Sbjct: 120 VPIYEGYALPHAILRLDLA-GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 178
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 NWDXLEKIWIITXKMN-XVXPPXKXRLVTEGXLNPKAXXKKL-PXFFXKXXTPXXFXSFK 582
NWD +EKIW T V P L+TE LNPKA +K+ F TP + + +
Sbjct: 35 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 94
Query: 583 XXXXXXXXXXXXXXCWNPXKGVSPTGPLXXGKXLP 687
+ GV+ T P+ G LP
Sbjct: 95 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALP 129
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 50.4 bits (115), Expect = 2e-06
Identities = 56/219 (25%), Positives = 82/219 (37%), Gaps = 8/219 (3%)
Frame = +2
Query: 203 LVVDNGSGMCKAGFAGDDAPRARVPSIVGXARHQGVXVXIGXKDSYVGNEAQ-NKKVS*T 379
+V+DNGSG+ KAGFAG+ P+ R + VG ++ V D ++G +A+ N+ +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 380 SIXHRTXIVLTGIXWKK-----FGL*PXK*TXXXPQXXPVWSLRVPLTP-RPXXKNYPXF 541
IV +K FG K P+ PV PL P + ++ F
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLK---IFPEEHPVLLTDAPLNPLKNRERSAEIF 127
Query: 542 FXNXXXPPXFXPSNRVPXXXVPXYPRXFVXXXXXXXXXXXXXXXGXXXPPXHLGFGXXPG 721
F P + V V G + G
Sbjct: 128 FETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAM-KHAIQRMDLAG 186
Query: 722 RXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVAL 835
R + +YL +L GY F + E EIV E CY+AL
Sbjct: 187 RDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLAL 225
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = +1
Query: 409 NWDXLEKIW--IITXKMNXVXPPXKXRLVTEGXLNP-KAXXKKLPXFFXKXXTPXXF 570
NW +EKIW I + P L+T+ LNP K + FF P +
Sbjct: 81 NWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALY 137
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.021
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 203 LVVDNGSGMCKAGFAGDDAPRARVPSIVG--XARHQGVXVXIGXKDSYVGNE 352
+VVDNG+G K G+AG + P PS+VG R I KD VG E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
Score = 35.5 bits (78), Expect = 0.048
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 719 GRXLXKYLMXILTERGYSFTTTXEREIVVTSGE-LCYVA 832
GR + KYL+ +L +RGY+F + + E V E LCY+A
Sbjct: 186 GRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIA 224
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 35.5 bits (78), Expect = 0.048
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 179 MCDEEVAALVVDNGSGMCKAGFAGDDAPRARVPSIV 286
M ++ A V+DNG+G K G+AG+ P+ +PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 35.1 bits (77), Expect = 0.064
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 188 EEVAALVVDNGSGMCKAGFAGDDAPRARVPSIV 286
+EV+ LV D GS + GFAG++ P+ +PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -1
Query: 297 RAXPTIEGTRARGASSPAKPALHIPEPLSTTNAATSS 187
RA P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 641 RAHPEVE--QPVSSSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -1
Query: 297 RAXPTIEGTRARGASSPAKPALHIPEPLSTTNAATSS 187
RA P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVE--QPVSSSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -1
Query: 297 RAXPTIEGTRARGASSPAKPALHIPEPLSTTNAATSS 187
RA P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVE--QPVSSSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -1
Query: 297 RAXPTIEGTRARGASSPAKPALHIPEPLSTTNAATSS 187
RA P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVE--QPVSSSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,412,598
Number of Sequences: 27780
Number of extensions: 282005
Number of successful extensions: 733
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -